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Report for Sequence Feature Glyma08g05220
Feature Type: gene_model
Chromosome: Gm08
Start: 3703224
stop: 3706254
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma08g05220
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT1G67970 AT
Annotation by Michelle Graham. TAIR10: heat shock transcription factor A8 | chr1:25484844-25486313 REVERSE LENGTH=374
SoyBase E_val: 2.00E-89 ISS
GO:0006355 GO-bp
Annotation by Michelle Graham. GO Biological Process: regulation of transcription, DNA-dependent
SoyBase N/A ISS
GO:0005634 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: nucleus
SoyBase N/A ISS
GO:0003677 GO-mf
Annotation by Michelle Graham. GO Molecular Function: DNA binding
SoyBase N/A ISS
GO:0003700 GO-mf
Annotation by Michelle Graham. GO Molecular Function: sequence-specific DNA binding transcription factor activity
SoyBase N/A ISS
GO:0043565 GO-mf
Annotation by Michelle Graham. GO Molecular Function: sequence-specific DNA binding
SoyBase N/A ISS
KOG0627
KOG
Heat shock transcription factor
JGI ISS
PTHR10015 Panther
HEAT SHOCK TRANSCRIPTION FACTOR
JGI ISS
PTHR10015:SF7 Panther
HEAT SHOCK TRANSCRIPTION FACTOR
JGI ISS
PF00447 PFAM
HSF-type DNA-binding
JGI ISS
UniRef100_G7LBG8 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Heat stress transcription factor A-8 n=1 Tax=Medicago truncatula RepID=G7LBG8_MEDTR
SoyBase E_val: 1.00E-179 ISS
UniRef100_I1KQD5 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1KQD5_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma08g05220
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma08g05220
Paralog Evidence Comments
Glyma05g34450 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma08g05220 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.08g047400 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma08g05220
Transcripts of Glyma08g05220
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma08g05220.5 sequence type=transcript gene model=Glyma08g05220 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
AAAACCCCGAAAAAAGAAAAAGGTTGGAAAGTGCTGTGACAGCACATAAAAGAAGGCCCACGGAAATTTCATTTCATTGAGTTCCCCTTTGCCAAGTCTTGTCTTGTGTTTGTTGCAGTTGCGGTTGCGGTTGCGATTGCGATGGTGAAATCGAACGAGAACGGTTCTGGTTCCGTTTCGGTGCCTCCTTTCCTGAAAAAATGTTACGATATGGTGGAAGACCGCAACACTGATTCTATCATCCGTTGGAGCGATGGCGGTGACAGCTTTGTCATCTCCGACATCACTCAATTCTCCGTCACGCTCCTTCCCACCTATTTCAAACACAACAATTTCTCCAGTTTCATCAGACAACTCAATATCTATGGTTTCAGGAAAATTGATACGGATTGCTGGGAATTTGCCAATGAGAACTTTGTTAGAGGTCAAAAGCATTTGTTGAAGAATATACGTAGAAGGAAACATCCACACAGTGCAGATCAGCAAAAAGCATTGCCACAGCAAGACAATTGTGATGAACCATCACAAGAAGCACCGTATCATGGCCTTTGGAAAGAAGTTGAGAATCTAAAACTTGATAAAAATTCGCTCACGCAAGAATTGGTCAAACTTAGGCAACACCAGGAATCTGCTGAGAATAAGTTGCTGCTCCTGAGTGATCGCCTTCAAGGAATGGAAAAGCATCAGCAGCAGATGTTATCATTTTTAGTCATGGTTGTGCAAAGCCCTGGGTTCATGGTTCAGCTTCTTCATCCTAAGGAAAATAATTGGCATTTGGCTGAATCATGGAATATATTGGATCAAGATAAACAAGATGACAAGCCAGTTGCTTCTGATGGGATGATAATAAAGTATAAACCACCTGTAGGTGAAAAACTAAAGCCTGTAGTTCCTCTGTCTCCTGGTTTCGAAAAGCAAACAGAACCCGAGCTTTCTGCAGAAGGGCTAAAAGACTTGTGCGTCAGTTCTGAATTCTTGAAAGTGCTTCTGGATGAAAAATTATCTCCATTAGAAAATCATTCTCCATTTCTCCTACCAGATTTACCTGATGATGGTTCATGGGAACAGCTTTTTCTAGGTAGTCCTTTCATGGGAAACATTCAAGATTCTAATAAAGAAAGTGAGGGGCACACCAATGGTGGAATGGAGATGGAACCAACAATATCTGAGACTCCAAATGAAAATTCTCGAACTTTTGAATCGATGATTGTAGAGATGGAGAAAACTCGAGAATGAGTTGGAGTTGTATGCACATGGTGGGCTGTCTTCTTGGAATCCATCAGATATTTTTCAGCTGGGCTGTCTCATACTGAGCTAATGGAGCTTTAGTTTCTGAAACTAACAATATATAGGGAAGGAAGTAATAATGTCCATCAGATATTTTTCAGCTGGGCTGTCTTCACAGATTACTTCACACTATAATTATATTATAGTATTAAGTCGCAATTATTTTCTCTCCCATCTTCCTTCAGCAGTTGTTAGATCCTCTTCTAGAATCCATGTGAGTCTGCTCTCATTTATATGTTGAGATGCTAAATATATTTTGGCTTCCTGATACATGGTGTCGGAGATCAGGAGTTGTATGGTAGTGCACAAGTGCGGCGACCTATATATATAGCGGATCAATTATTTCTTTTATGGAAAATTGTAAGGGAAAACGGCAACTTTATTTTTTGTGCCACATTAAACAGTGGCACTTGCCTTCATATATATTATAAAATTTCACGAAATTCATGCTTCTCTTGCATACTAGTGTTTGCAGAAGCCAGTGCTCTGATAATGCTCTTTCCCTTTTCTCTTACTTCTCCTAGTTCTCATGTCTCTGAACTTTATTCTTCTACTGTTGTGTTTTGATATGGCAGCAAAGAGATTTGTTGCCCCACAAAAAGGGTCATCATTGTATGACATGATTTTTTTTCCTTCTTTTGTTAAATTAAGTTGGATTAACACTAACTTCAAAAC
>Glyma08g05220.6 sequence type=transcript gene model=Glyma08g05220 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
AAAACCCCGAAAAAAGAAAAAGGTTGGAAAGTGCTGTGACAGCACATAAAAGAAGGCCCACGGAAATTTCATTTCATTGAGTTCCCCTTTGCCAAGTCTTGTCTTGTGTTTGTTGCAGTTGCGGTTGCGGTTGCGATTGCGATGGTGAAATCGAACGAGAACGGTTCTGGTTCCGTTTCGGTGCCTCCTTTCCTGAAAAAATGTTACGATATGGTGGAAGACCGCAACACTGATTCTATCATCCGTTGGAGCGATGGCGGTGACAGCTTTGTCATCTCCGACATCACTCAATTCTCCGTCACGCTCCTTCCCACCTATTTCAAACACAACAATTTCTCCAGTTTCATCAGACAACTCAATATCTATGGTTTCAGGAAAATTGATACGGATTGCTGGGAATTTGCCAATGAGAACTTTGTTAGAGGTCAAAAGCATTTGTTGAAGAATATACGTAGAAGGAAACATCCACACAGTGCAGATCAGCAAAAAGCATTGCCACAGCAAGACAATTGTGATGAACCATCACAAGAAGCACCGTATCATGGCCTTTGGAAAGAAGTTGAGAATCTAAAACTTGATAAAAATTCGCTCACGCAAGAATTGGTCAAACTTAGGCAACACCAGGAATCTGCTGAGAATAAGTTGCTGCTCCTGAGTGATCGCCTTCAAGGAATGGAAAAGCATCAGCAGCAGATGTTATCATTTTTAGTCATGGTTGTGCAAAGCCCTGGGTTCATGGTTCAGCTTCTTCATCCTAAGGAAAATAATTGGCATTTGGCTGAATCATGGAATATATTGGATCAAGATAAACAAGATGACAAGCCAGTTGCTTCTGATGGGATGATAATAAAGTATAAACCACCTGTAGGTGAAAAACTAAAGCCTGTAGTTCCTCTGTCTCCTGGTTTCGAAAAGCAAACAGAACCCGAGCTTTCTGCAGAAGGGCTAAAAGACTTGTGCGTCAGTTCTGAATTCTTGAAAGTGCTTCTGGATGAAAAATTATCTCCATTAGAAAATCATTCTCCATTTCTCCTACCAGATTTACCTGATGATGGTTCATGGGAACAGCTTTTTCTAGGTAGTCCTTTCATGGGAAACATTCAAGATTCTAATAAAGAAAGTGAGGGGCACACCAATGGTGGAATGGAGATGGAACCAACAATATCTGAGACTCCAAATGAAAATTCTCGAACTTTTGAATCGATGATTGTAGAGATGGAGAAAACTCGAGAATGAGTTGGAGTTGTATGCACATGGTGGGCTGTCTTCTTGGAATCCATCAGATATTTTTCAGCTGGGCTGTCTCATACTGAGCTAATGGAGCTTTAGTTTCTGAAACTAACAATATATAGGGAAGGAAGTAATAATGTCCATCAGATATTTTTCAGCTGGGCTGTCTTCACAGATTACTTCACACTATAATTATATTATAGTATTAAGTCGCAATTATTTTCTCTCCCATCTTCCTTCAGCAGTTGTTAGATCCTCTTCTAGAATCCATATTTTGGCTTCCTGATACATGGTGTCGGAGATCAGGAGTTGTATGGTAGTGCACAAGTGCGGCGACCTATATATATAGCGGATCAATTATTTCTTTTATGGAAAATTGTAAGGGAAAACGGCAACTTTATTTTTTGTGCCACATTAAACAGTGGCACTTGCCTTCATATATATTATAAAATTTCACGAAATTCATGCTTCTCTTGCATACTAGTGTTTGCAGAAGCCAGTGCTCTGATAATGCTCTTTCCCTTTTCTCTTACTTCTCCTAGTTCTCATGTCTCTGAACTTTATTCTTCTACTGTTGTGTTTTGATATGGCAGCAAAGAGATTTGTTGCCCCACAAAAAGGGTCATCATTGTATGACATGATTTTTTTTCCTTCTTTTGTTAAATTAAGTTGGATTAACACTAACTTCAAAAC
Coding sequences of Glyma08g05220
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma08g05220.4 sequence type=CDS gene model=Glyma08g05220 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGTGAAATCGAACGAGAACGGTTCTGGTTCCGTTTCGGTGCCTCCTTTCCTGAAAAAATGTTACGATATGGTGGAAGACCGCAACACTGATTCTATCATCCGTTGGAGCGATGGCGGTGACAGCTTTGTCATCTCCGACATCACTCAATTCTCCGTCACGCTCCTTCCCACCTATTTCAAACACAACAATTTCTCCAGTTTCATCAGACAACTCAATATCTATGGTTTCAGGAAAATTGATACGGATTGCTGGGAATTTGCCAATGAGAACTTTGTTAGAGGTCAAAAGCATTTGTTGAAGAATATACGTAGAAGGAAACATCCACACAGTGCAGATCAGCAAAAAGCATTGCCACAGCAAGACAATTGTGATGAACCATCACAAGAAGCACCGTATCATGGCCTTTGGAAAGAAGTTGAGAATCTAAAACTTGATAAAAATTCGCTCACGCAAGAATTGGTCAAACTTAGGCAACACCAGGAATCTGCTGAGAATAAGTTGCTGCTCCTGAGTGATCGCCTTCAAGGAATGGAAAAGCATCAGCAGCAGATGTTATCATTTTTAGTCATGGTTGTGCAAAGCCCTGGGTTCATGGTTCAGCTTCTTCATCCTAAGGAAAATAATTGGCATTTGGCTGAATCATGGAATATATTGGATCAAGATAAACAAGATGACAAGCCAGTTGCTTCTGATGGGATGATAATAAAGTATAAACCACCTGTAGGTGAAAAACTAAAGCCTGTAGTTCCTCTGTCTCCTGGTTTCGAAAAGCAAACAGAACCCGAGCTTTCTGCAGAAGGGCTAAAAGACTTGTGCGTCAGTTCTGAATTCTTGAAAGTGCTTCTGGATGAAAAATTATCTCCATTAGAAAATCATTCTCCATTTCTCCTACCAGATTTACCTGATGATGGTTCATGGGAACAGCTTTTTCTAGGTAGTCCTTTCATGGGAAACATTCAAGATTCTAATAAAGAAAGTGAGGGGCACACCAATGGTGGAATGGAGATGGAACCAACAATATCTGAGACTCCAAATGAAAATTCTCGAACTTTTGAATCGATGATTGTAGAGATGGAGAAAACTCGAGAATGA
>Glyma08g05220.5 sequence type=CDS gene model=Glyma08g05220 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGTGAAATCGAACGAGAACGGTTCTGGTTCCGTTTCGGTGCCTCCTTTCCTGAAAAAATGTTACGATATGGTGGAAGACCGCAACACTGATTCTATCATCCGTTGGAGCGATGGCGGTGACAGCTTTGTCATCTCCGACATCACTCAATTCTCCGTCACGCTCCTTCCCACCTATTTCAAACACAACAATTTCTCCAGTTTCATCAGACAACTCAATATCTATGGTTTCAGGAAAATTGATACGGATTGCTGGGAATTTGCCAATGAGAACTTTGTTAGAGGTCAAAAGCATTTGTTGAAGAATATACGTAGAAGGAAACATCCACACAGTGCAGATCAGCAAAAAGCATTGCCACAGCAAGACAATTGTGATGAACCATCACAAGAAGCACCGTATCATGGCCTTTGGAAAGAAGTTGAGAATCTAAAACTTGATAAAAATTCGCTCACGCAAGAATTGGTCAAACTTAGGCAACACCAGGAATCTGCTGAGAATAAGTTGCTGCTCCTGAGTGATCGCCTTCAAGGAATGGAAAAGCATCAGCAGCAGATGTTATCATTTTTAGTCATGGTTGTGCAAAGCCCTGGGTTCATGGTTCAGCTTCTTCATCCTAAGGAAAATAATTGGCATTTGGCTGAATCATGGAATATATTGGATCAAGATAAACAAGATGACAAGCCAGTTGCTTCTGATGGGATGATAATAAAGTATAAACCACCTGTAGGTGAAAAACTAAAGCCTGTAGTTCCTCTGTCTCCTGGTTTCGAAAAGCAAACAGAACCCGAGCTTTCTGCAGAAGGGCTAAAAGACTTGTGCGTCAGTTCTGAATTCTTGAAAGTGCTTCTGGATGAAAAATTATCTCCATTAGAAAATCATTCTCCATTTCTCCTACCAGATTTACCTGATGATGGTTCATGGGAACAGCTTTTTCTAGGTAGTCCTTTCATGGGAAACATTCAAGATTCTAATAAAGAAAGTGAGGGGCACACCAATGGTGGAATGGAGATGGAACCAACAATATCTGAGACTCCAAATGAAAATTCTCGAACTTTTGAATCGATGATTGTAGAGATGGAGAAAACTCGAGAATGA
>Glyma08g05220.6 sequence type=CDS gene model=Glyma08g05220 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGTGAAATCGAACGAGAACGGTTCTGGTTCCGTTTCGGTGCCTCCTTTCCTGAAAAAATGTTACGATATGGTGGAAGACCGCAACACTGATTCTATCATCCGTTGGAGCGATGGCGGTGACAGCTTTGTCATCTCCGACATCACTCAATTCTCCGTCACGCTCCTTCCCACCTATTTCAAACACAACAATTTCTCCAGTTTCATCAGACAACTCAATATCTATGGTTTCAGGAAAATTGATACGGATTGCTGGGAATTTGCCAATGAGAACTTTGTTAGAGGTCAAAAGCATTTGTTGAAGAATATACGTAGAAGGAAACATCCACACAGTGCAGATCAGCAAAAAGCATTGCCACAGCAAGACAATTGTGATGAACCATCACAAGAAGCACCGTATCATGGCCTTTGGAAAGAAGTTGAGAATCTAAAACTTGATAAAAATTCGCTCACGCAAGAATTGGTCAAACTTAGGCAACACCAGGAATCTGCTGAGAATAAGTTGCTGCTCCTGAGTGATCGCCTTCAAGGAATGGAAAAGCATCAGCAGCAGATGTTATCATTTTTAGTCATGGTTGTGCAAAGCCCTGGGTTCATGGTTCAGCTTCTTCATCCTAAGGAAAATAATTGGCATTTGGCTGAATCATGGAATATATTGGATCAAGATAAACAAGATGACAAGCCAGTTGCTTCTGATGGGATGATAATAAAGTATAAACCACCTGTAGGTGAAAAACTAAAGCCTGTAGTTCCTCTGTCTCCTGGTTTCGAAAAGCAAACAGAACCCGAGCTTTCTGCAGAAGGGCTAAAAGACTTGTGCGTCAGTTCTGAATTCTTGAAAGTGCTTCTGGATGAAAAATTATCTCCATTAGAAAATCATTCTCCATTTCTCCTACCAGATTTACCTGATGATGGTTCATGGGAACAGCTTTTTCTAGGTAGTCCTTTCATGGGAAACATTCAAGATTCTAATAAAGAAAGTGAGGGGCACACCAATGGTGGAATGGAGATGGAACCAACAATATCTGAGACTCCAAATGAAAATTCTCGAACTTTTGAATCGATGATTGTAGAGATGGAGAAAACTCGAGAATGA
Predicted protein sequences of Glyma08g05220
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma08g05220.4 sequence type=predicted peptide gene model=Glyma08g05220 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MVKSNENGSGSVSVPPFLKKCYDMVEDRNTDSIIRWSDGGDSFVISDITQFSVTLLPTYFKHNNFSSFIRQLNIYGFRKIDTDCWEFANENFVRGQKHLLKNIRRRKHPHSADQQKALPQQDNCDEPSQEAPYHGLWKEVENLKLDKNSLTQELVKLRQHQESAENKLLLLSDRLQGMEKHQQQMLSFLVMVVQSPGFMVQLLHPKENNWHLAESWNILDQDKQDDKPVASDGMIIKYKPPVGEKLKPVVPLSPGFEKQTEPELSAEGLKDLCVSSEFLKVLLDEKLSPLENHSPFLLPDLPDDGSWEQLFLGSPFMGNIQDSNKESEGHTNGGMEMEPTISETPNENSRTFESMIVEMEKTRE*
>Glyma08g05220.5 sequence type=predicted peptide gene model=Glyma08g05220 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MVKSNENGSGSVSVPPFLKKCYDMVEDRNTDSIIRWSDGGDSFVISDITQFSVTLLPTYFKHNNFSSFIRQLNIYGFRKIDTDCWEFANENFVRGQKHLLKNIRRRKHPHSADQQKALPQQDNCDEPSQEAPYHGLWKEVENLKLDKNSLTQELVKLRQHQESAENKLLLLSDRLQGMEKHQQQMLSFLVMVVQSPGFMVQLLHPKENNWHLAESWNILDQDKQDDKPVASDGMIIKYKPPVGEKLKPVVPLSPGFEKQTEPELSAEGLKDLCVSSEFLKVLLDEKLSPLENHSPFLLPDLPDDGSWEQLFLGSPFMGNIQDSNKESEGHTNGGMEMEPTISETPNENSRTFESMIVEMEKTRE*
>Glyma08g05220.6 sequence type=predicted peptide gene model=Glyma08g05220 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MVKSNENGSGSVSVPPFLKKCYDMVEDRNTDSIIRWSDGGDSFVISDITQFSVTLLPTYFKHNNFSSFIRQLNIYGFRKIDTDCWEFANENFVRGQKHLLKNIRRRKHPHSADQQKALPQQDNCDEPSQEAPYHGLWKEVENLKLDKNSLTQELVKLRQHQESAENKLLLLSDRLQGMEKHQQQMLSFLVMVVQSPGFMVQLLHPKENNWHLAESWNILDQDKQDDKPVASDGMIIKYKPPVGEKLKPVVPLSPGFEKQTEPELSAEGLKDLCVSSEFLKVLLDEKLSPLENHSPFLLPDLPDDGSWEQLFLGSPFMGNIQDSNKESEGHTNGGMEMEPTISETPNENSRTFESMIVEMEKTRE*