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Report for Sequence Feature Glyma08g04911

Feature Type:gene_model
Chromosome:Gm08
Start:3502620
stop:3505873
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma08g04911
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G38260AT Annotation by Michelle Graham. TAIR10: Protein kinase superfamily protein | chr5:15283692-15285837 REVERSE LENGTH=638 SoyBaseE_val: 2.00E-131ISS
GO:0006468GO-bp Annotation by Michelle Graham. GO Biological Process: protein phosphorylation SoyBaseN/AISS
GO:0005886GO-cc Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane SoyBaseN/AISS
GO:0004672GO-mf Annotation by Michelle Graham. GO Molecular Function: protein kinase activity SoyBaseN/AISS
GO:0004674GO-mf Annotation by Michelle Graham. GO Molecular Function: protein serine/threonine kinase activity SoyBaseN/AISS
GO:0005524GO-mf Annotation by Michelle Graham. GO Molecular Function: ATP binding SoyBaseN/AISS
GO:0016301GO-mf Annotation by Michelle Graham. GO Molecular Function: kinase activity SoyBaseN/AISS
GO:0016772GO-mf Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring phosphorus-containing groups SoyBaseN/AISS
KOG1187 KOG Serine/threonine protein kinase JGI ISS
PTHR24420Panther FAMILY NOT NAMED JGI ISS
PTHR24420:SF441Panther SUBFAMILY NOT NAMED JGI ISS
PF07714PFAM Protein tyrosine kinase JGI ISS
UniRef100_G7L9S6UniRef Annotation by Michelle Graham. Most informative UniRef hit: Kinase R-like protein n=1 Tax=Medicago truncatula RepID=G7L9S6_MEDTR SoyBaseE_val: 2.00E-173ISS
UniRef100_UPI00023389EEUniRef Annotation by Michelle Graham. Best UniRef hit: UPI00023389EE related cluster n=1 Tax=unknown RepID=UPI00023389EE SoyBaseE_val: 0ISS

Expression Patterns of Glyma08g04911
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma08g04911 not represented in the dataset
Glyma08g04911 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma08g04911 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.08g044300 Wm82.a2.v1IGC As supplied by JGI

References for Glyma08g04911
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma08g04911
>Glyma08g04911.1   sequence type=CDS   gene model=Glyma08g04911   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTTCAAATTTGCATTTTTTTTTGCCTTTTTTCTTTTTTTCACTACTAATACTACCTCCGGAAGCCACAACAACACATCATCCTGTCCTACTAACAGCTGCAAAAATGGACCTAAGATCAGTTACCCATTTTGGTTTTCCCAAGGTTCCCTTCCTGATCAATATTGCGGTTACCAAGAACTTGGGCTTTTTTGTGATGACAATGGCAACGCTATTTTTTCTCCACCCCCAGGTAAATACTATTACGTAAAAGACATAGACTATGCAAACCATATACTTAAGCTCGTTGATTTTGACACTGCAAACATAACTTGTCCAAGGGCACTTCACAGCTTTCCCTTGGGCAACCTACCACTCTCTCACTCCCCTTTGAACTCAAACCTCAACTTTTACTACAACTGCACTCACTACCCTTCTTCTGGTGTGCCTCCTATCGAGTGTCTAAGTTCTGGGGCAAACCGGTCTTTTGTGTTTCTGATGGGGAACGAGACCGAAGGTTTCGACTGTCAGGAAAAAGTTGTGGTGGCAGTGTTGAAGGATCAGATCACAAGTCATGATGATGGCGGCTTGATCAACGAGTTTGCTGGGGCCATGAATGAAGGCTTCTTGCTTGATTGGCAAACAACTACGAATTGCGCCGAGTGCGAGGCTAGTAATGGAACTTGTGGTTACAGTAACACCAGGAAGGAGACGCTGTGCTTTTGCAAGGATGGCACCACAAAAAGCAATACATGTCAAGGGGGAGGGGGAAGCAGAACCGGTTTGTCAAGGTTAATTATAGGTTTAATAATAGGTGGAGGAATTGGTGCACTGCTGATATGCATCCTAGTTTACAGTTTTAGACGAAAATTATCACCAATTGTGTCAGAAATCCGGAAGGTCAAAAAGATTCATCAAGACATTGAGGCCCTCATAAGAAGTAATGGACCTCTTCCCATAAAAAGATATTCATATTCAGAGATAAAGAAAATGACCAATTCTTTTCAATCCAAACTGGGACAAGGTGGCTATGGTCAAGTATATAAAGGAAATCTAAGCAACAACTCTCCTGTGGCAGTGAAGGTACTGAATGCTTCCAAAGGGAACGGGGAAGAATTTATGAACGAAGTTATAAGCATCAGTAGAACGTCCCATGTAAATATTGTTAATCTCCTTGGTTTTTGTCTTGAAGGCCAGAAGAAAGCACTTGTCTACGATTACATGCCCAATGGATCCCTTGAAAAGTTTATACACAACAAGAATTTGGAAACCAATCCACCTTTGAGTTGGGAAAGATTACACCACATTGCTGAAGGGATAGCTAAAGGACTGGAGTACTTGCATAGAGGGTGCAACACTCGGATATTACATTTTGACATAAAACCAAGCAACATCCTTTTGGACAAAAAGTTCTGTCCCAAAATCTCTGATTTTGGGATGGCTAAGCTCTGCTCAAATACACAAAGTATCATATCTATGTATGGTGCTAGAGGGACAGTTGGGTATATAGCTCCAGAAGTGTGGAACAGAAACTTTGGAGGGGTGTCATATAAGTCTGATGTCTATAGTTATGGAATGATGATTTTGGAAATGGTCGGAGGAAGGCAAAGTATCAGTATTGAAGCAAGTCATTCAAGTGAGACATATTTTCCTGATTGGATATACAAGCATGTTGAGTTGGGAAGCAATTTAGCATGGGATGAAGGTATGACCACAGATGAAAATGAAATTTGTAAGAAAATGATTATTGTGGGATTGTGGTGCATACAAACAATCCCATCTGACAGGCCTGCTATGAGTAAGGTGGTTGAAATGTTAGAAGGAAGCATAGATCAGTTGCAAATTCCACCAAAGCCATTCATATTTAGTCCTACCAAAACCCAAGTGGATATTTGCACCACTACTAGTAGCTCTGATTGA
Predicted protein sequences of Glyma08g04911
>Glyma08g04911.1   sequence type=predicted peptide   gene model=Glyma08g04911   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MFKFAFFFAFFLFFTTNTTSGSHNNTSSCPTNSCKNGPKISYPFWFSQGSLPDQYCGYQELGLFCDDNGNAIFSPPPGKYYYVKDIDYANHILKLVDFDTANITCPRALHSFPLGNLPLSHSPLNSNLNFYYNCTHYPSSGVPPIECLSSGANRSFVFLMGNETEGFDCQEKVVVAVLKDQITSHDDGGLINEFAGAMNEGFLLDWQTTTNCAECEASNGTCGYSNTRKETLCFCKDGTTKSNTCQGGGGSRTGLSRLIIGLIIGGGIGALLICILVYSFRRKLSPIVSEIRKVKKIHQDIEALIRSNGPLPIKRYSYSEIKKMTNSFQSKLGQGGYGQVYKGNLSNNSPVAVKVLNASKGNGEEFMNEVISISRTSHVNIVNLLGFCLEGQKKALVYDYMPNGSLEKFIHNKNLETNPPLSWERLHHIAEGIAKGLEYLHRGCNTRILHFDIKPSNILLDKKFCPKISDFGMAKLCSNTQSIISMYGARGTVGYIAPEVWNRNFGGVSYKSDVYSYGMMILEMVGGRQSISIEASHSSETYFPDWIYKHVELGSNLAWDEGMTTDENEICKKMIIVGLWCIQTIPSDRPAMSKVVEMLEGSIDQLQIPPKPFIFSPTKTQVDICTTTSSSD*






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