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Report for Sequence Feature Glyma08g03391

Feature Type:gene_model
Chromosome:Gm08
Start:2393012
stop:2395416
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma08g03391
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G29490AT Annotation by Michelle Graham. TAIR10: Metallopeptidase M24 family protein | chr4:14487943-14491321 FORWARD LENGTH=486 SoyBaseE_val: 5.00E-38ISS
GO:0009987GO-bp Annotation by Michelle Graham. GO Biological Process: cellular process SoyBaseN/AISS
GO:0004177GO-mf Annotation by Michelle Graham. GO Molecular Function: aminopeptidase activity SoyBaseN/AISS
GO:0030145GO-mf Annotation by Michelle Graham. GO Molecular Function: manganese ion binding SoyBaseN/AISS
PTHR10804Panther PROTEASE FAMILY M24 (METHIONYL AMINOPEPTIDASE, AMINOPEPTIDASE P) JGI ISS
PTHR10804:SF17Panther PROLINE AMINOPEPTIDASE P JGI ISS
PF00557PFAM Metallopeptidase family M24 JGI ISS
PF05195PFAM Aminopeptidase P, N-terminal domain JGI ISS
UniRef100_B9RKB6UniRef Annotation by Michelle Graham. Most informative UniRef hit: Xaa-pro dipeptidase, putative n=1 Tax=Ricinus communis RepID=B9RKB6_RICCO SoyBaseE_val: 1.00E-40ISS
UniRef100_UPI000233870BUniRef Annotation by Michelle Graham. Best UniRef hit: UPI000233870B related cluster n=1 Tax=unknown RepID=UPI000233870B SoyBaseE_val: 1.00E-56ISS

Expression Patterns of Glyma08g03391
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma08g03391 not represented in the dataset
Glyma08g03391 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma08g03391 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.08g030000 Wm82.a2.v1IGC As supplied by JGI

References for Glyma08g03391
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma08g03391
>Glyma08g03391.1   sequence type=CDS   gene model=Glyma08g03391   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAGGGATGAACAAAGGTGTCGATGGAGCTTCATGTCAAAAACAGGGAGAAGCTCCTCACTTCCCTTCGTCAACACCTGTCCGAGTCTTCTCGTCCTCCTTCAAGATGGCGAAGAGCAAACGCGTTACGACACCGATCACTTGAAGCTCTTCATGTATCCTAATCCTGAACCTCGCCATTTCAATTTATCGATCCCTAATTCGATTTGCTTCGCGCTTCGCGGGCAGGAGAGTTTCTTCGCTTACTTTTTTGGAGTCATTGAGCCTGGATTCTATGCAGCTATTGACGTTGCAACTGGGAATTCTATCCTATTTGCTCCCAGGTTACCTTCTGAGTATGCTGTTTGGTTGGGGGTGATTAAGCCACTCTCTTACTTTAAGTCAGAGCTGGAAATTGCTCTTATTCAGTATGCCAATGATATAAGCTCTGAAGCTCATGTTGAGGTTATGAGAAACACCAAGGCGGGCAAGAAGGAGTATCAGCTTGAAAGCATTTTTCTTCACCACACCTGCATGTATGGTGGATGCTGGCATTGCTCCTATACATGTATTTGTGCTACTGGTGATAATAGTGCTGTTCTTCATTATGGCCATGCAGCAGCTCTGATAACTGCTAAATAA
Predicted protein sequences of Glyma08g03391
>Glyma08g03391.1   sequence type=predicted peptide   gene model=Glyma08g03391   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MRDEQRCRWSFMSKTGRSSSLPFVNTCPSLLVLLQDGEEQTRYDTDHLKLFMYPNPEPRHFNLSIPNSICFALRGQESFFAYFFGVIEPGFYAAIDVATGNSILFAPRLPSEYAVWLGVIKPLSYFKSELEIALIQYANDISSEAHVEVMRNTKAGKKEYQLESIFLHHTCMYGGCWHCSYTCICATGDNSAVLHYGHAAALITAK*






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