SoyBase
SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
|
A newer version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| UniRef100_I1KPP2 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1KPP2_SOYBN | SoyBase | E_val: 1.00E-81 | ISS |
|
Glyma08g03010 not represented in the dataset |
Glyma08g03010 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|---|---|---|
| Glyma.08g026600 | Wm82.a2.v1 | IGC | As supplied by JGI |
| Glyma08g03005 | Wm82.a1.v1.1 | IGC | Correspondences based on a combination of genome sequence coordinate overlap (fjoin) and sequence similarity (ungapped blastn) |
| Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma08g03010.3 sequence type=CDS gene model=Glyma08g03010 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGTTCTGGTCTTTTATGTGTTTATTATCTGAAATTTGGCATGATTTGGCGACCTACGGTGCATGGATATTTATTGGATATGTATTCACACGCCATATCATGGGTATTTATTGGATTGGGTATTTGGTGAATATTGGCATGATTTGGCAAGCTACAATGCATGGGTGGTTAACAGTTGCCACAACCCTACATTACAGCCTGCAATATCATAGTAGCGTTATATCCTATTGCATTCATGCATTTTCTAATGCATATCATGTTGCAGTTTATCTTGTGCTTAATGGTCGTTGCATGATGTGGGAGTTATGTTTCTATTTGATGTTTAATTTGTTGTGTTTTTTAACCACTATGTGTTCTGTGTTGAAATAG
>Glyma08g03010.3 sequence type=predicted peptide gene model=Glyma08g03010 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MFWSFMCLLSEIWHDLATYGAWIFIGYVFTRHIMGIYWIGYLVNIGMIWQATMHGWLTVATTLHYSLQYHSSVISYCIHAFSNAYHVAVYLVLNGRCMMWELCFYLMFNLLCFLTTMCSVLK*
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||
|
|
|
