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Report for Sequence Feature Glyma08g00210

Feature Type:gene_model
Chromosome:Gm08
Start:7586
stop:8592
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma08g00210
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G30860AT Annotation by Michelle Graham. TAIR10: SET domain group 4 | chr4:15024546-15027427 FORWARD LENGTH=497 SoyBaseE_val: 3.00E-15ISS
GO:0009909GO-bp Annotation by Michelle Graham. GO Biological Process: regulation of flower development SoyBaseN/AISS
GO:0016458GO-bp Annotation by Michelle Graham. GO Biological Process: gene silencing SoyBaseN/AISS
GO:0034968GO-bp Annotation by Michelle Graham. GO Biological Process: histone lysine methylation SoyBaseN/AISS
GO:0000785GO-cc Annotation by Michelle Graham. GO Cellular Compartment: chromatin SoyBaseN/AISS
GO:0005634GO-cc Annotation by Michelle Graham. GO Cellular Compartment: nucleus SoyBaseN/AISS
GO:0008270GO-mf Annotation by Michelle Graham. GO Molecular Function: zinc ion binding SoyBaseN/AISS
GO:0018024GO-mf Annotation by Michelle Graham. GO Molecular Function: histone-lysine N-methyltransferase activity SoyBaseN/AISS
UniRef100_I1KDG2UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1KDG2_SOYBN SoyBaseE_val: 4.00E-68ISS
UniRef100_Q949T8UniRef Annotation by Michelle Graham. Most informative UniRef hit: Histone-lysine N-methyltransferase ASHR3 n=1 Tax=Arabidopsis thaliana RepID=ASHR3_ARATH SoyBaseE_val: 1.00E-12ISS

Expression Patterns of Glyma08g00210
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma08g00210 not represented in the dataset
Glyma08g00210 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma08g00210 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments

References for Glyma08g00210
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma08g00210
>Glyma08g00210.1   sequence type=CDS   gene model=Glyma08g00210   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGCCAGATTTGGGGAACCTATCTCTCTCCGCGGCTCTCAAACTCTCTCACTGCTCCTCCGATGATGCCCTTGACGCTCCTGTCAAAACCCTAACCAATGGCTTCGGTTCCAAACCTGCCTTCGAACCTCGGGTTTTGAAGCGCACCCGTGGCTCCCTGGATCGGGTCAAGAAGCCCCCCACCGCCGACAAGGCCTTCCAAGATTGCCTCAAAGATCCTTTTCTAGTTGGCGCTCCCAAGATGGGTGAATGTTGTTTTTGCTGCCATTTTATTTACCCTGGGGATGATGAGCTCTTGTGTTCTGTTCGAGGATGTGACGCGCGCTACCATTCTGAATGTGCAAAAGAAGAAGCTGTTGGGCCTTCCACTCTGAAAAAATTCAAGTGTCAACAACATGGTTTGGGGTTTGGGGTTAGGGGGAAAAACAACATTCAGTTTGGAGATAAGGGACTGAATGAGACTGGAACTGCTTCCAATTATCATGATACAAAAAGAGAAGGATCACACTTGCTGGAGGAAAATATAAACTGTAGGAGAGTAGGTTTTAGTTTATCAAACCAAGCTTTGGGAGCTTGTTTTAAGCCATAA
Predicted protein sequences of Glyma08g00210
>Glyma08g00210.1   sequence type=predicted peptide   gene model=Glyma08g00210   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MPDLGNLSLSAALKLSHCSSDDALDAPVKTLTNGFGSKPAFEPRVLKRTRGSLDRVKKPPTADKAFQDCLKDPFLVGAPKMGECCFCCHFIYPGDDELLCSVRGCDARYHSECAKEEAVGPSTLKKFKCQQHGLGFGVRGKNNIQFGDKGLNETGTASNYHDTKREGSHLLEENINCRRVGFSLSNQALGACFKP*






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