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Feature Type: gene_model Chromosome: Gm07 Start: 44641813 stop: 44645344 Source: JGI Version: Wm82.a1.v1.1 High confidence: yes

A newer version of this gene model can be found here:

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G08565	AT	Annotation by Michelle Graham. TAIR10: Transcription initiation Spt4-like protein | chr5:2775964-2777154 FORWARD LENGTH=116	SoyBase	E_val: 3.00E-71	ISS
GO:0000394	GO-bp	Annotation by Michelle Graham. GO Biological Process: RNA splicing, via endonucleolytic cleavage and ligation	SoyBase	N/A	ISS
GO:0006355	GO-bp	Annotation by Michelle Graham. GO Biological Process: regulation of transcription, DNA-dependent	SoyBase	N/A	ISS
GO:0006366	GO-bp	Annotation by Michelle Graham. GO Biological Process: transcription from RNA polymerase II promoter	SoyBase	N/A	ISS
GO:0032786	GO-bp	Annotation by Michelle Graham. GO Biological Process: positive regulation of DNA-dependent transcription, elongation	SoyBase	N/A	ISS
GO:0005634	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: nucleus	SoyBase	N/A	ISS
GO:0008270	GO-mf	Annotation by Michelle Graham. GO Molecular Function: zinc ion binding	SoyBase	N/A	ISS
KOG3490	KOG	Transcription elongation factor SPT4	JGI		ISS
PTHR12882	Panther	SUPPRESSOR OF TY 4	JGI		ISS
PF06093	PFAM	Spt4/RpoE2 zinc finger	JGI		ISS
UniRef100_B9RGK4	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Suppressor of ty, putative n=1 Tax=Ricinus communis RepID=B9RGK4_RICCO	SoyBase	E_val: 1.00E-71	ISS
UniRef100_I1KNU2	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Glycine max RepID=I1KNU2_SOYBN	SoyBase	E_val: 8.00E-82	ISS

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Paralog	Evidence	Comments
Glyma17g00245	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.07g274100	Wm82.a2.v1	IGC	As supplied by JGI

Schmutz et al. 2010   Genome sequence of the palaeopolyploid soybean   Nature 2010, 463:178-183