Report for Sequence Feature Glyma07g37660
Feature Type: gene_model
Chromosome: Gm07
Start: 42648131
stop: 42654161
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma07g37660
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT4G15840 AT
Annotation by Michelle Graham. TAIR10: BTB/POZ domain-containing protein | chr4:8996963-9000852 FORWARD LENGTH=836
SoyBase E_val: 0 ISS
GO:0008150 GO-bp
Annotation by Michelle Graham. GO Biological Process: biological process
SoyBase N/A ISS
PTHR23231 Panther
FAMILY NOT NAMED
JGI ISS
PTHR23231:SF4 Panther
SUBFAMILY NOT NAMED
JGI ISS
PF00651 PFAM
BTB/POZ domain
JGI ISS
UniRef100_G7JLI1 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Kelch-like protein diablo n=1 Tax=Medicago truncatula RepID=G7JLI1_MEDTR
SoyBase E_val: 0 ISS
UniRef100_UPI0002338D6A UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI0002338D6A related cluster n=1 Tax=unknown RepID=UPI0002338D6A
SoyBase E_val: 0 ISS
Expression Patterns of Glyma07g37660
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Paralogs of Glyma07g37660
Paralog Evidence Comments
Glyma17g03000 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma07g37660 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.07g247100 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma07g37660
Coding sequences of Glyma07g37660
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma07g37660.1 sequence type=CDS gene model=Glyma07g37660 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGAGCATGGAGGAGCCTCAGTACCGCGAACATCCCAAAGCCAAAATCGCCACCATTCCGCCGTCGCAGCACTCCGATGGCGCCGCGGCCGAGTTGCGCGGTGTCGATTGCAACCTGGCTTCCCTCTGCGAGCATGTCCAAATCGAAGGCTTCAATTCCGGTTCCTTCTCTGATATCGTTGTCAATGCTATGGGTTCCACTTATCGCCTTCATCGTCTTATCCTCTCTCGCAGTTCGTATTTCAGGAACATGCTTCATGGGCCTTGGAAAGAAGCCGGTGCTCCTGTTGTGACTCTTCATGTTGATGATAAGAATGTTAATGATGAGGCAATTGCAATGGCTTTGGCATATCTATATGGACACCACCCTAAGCTTAATGATAATAATGCATTTCGTGTTCTTGCTGCTGCTTCCTTTCTTGACCTGCAGGATTTGTGTGGAATTTGTACAGATTTCATTATATCTGAGCTGTGGACTTCAAACTTCTTGGCTTATCAGGTGTTTGCGGAGAACCAAGACTATGGCATTCATGGGGAGCGTGTTAGAACTGCATGCTGGGGCTACCTCTGTCAAAGTGGTGGCATGGAATTGAAAGAGGTGCTTCCTAAACTTTCATCTCAAACATTACATGCATTACTGACTTCTAATGATCTGTGGATACCCAATGAAGAGAAACGGTTTGAATTGGCTTTGCATACATTCCTGGCAAAAAGTGCTAATTGCAAGGTTGAACATCATGCGCATGGAATTTCTGGTACTGAGTCTGCAACCAGTGTCCATGCTGATTCTGGTAGCTCCAAGGGAAAAAGTGTGACTGATAGCTGCACTAGTAAGAGGTTGGAAACTGGCATGGGGAAAATGAGTCTTAAAACTGATCTAGAGGACCCTAGCACACCTAGTCTTCTAGTCAAGCTTGCAGATCCAGTGGCAGACTTCAACGACGGGGTTTCTGTTTCCAATGAACGGGTTCAACAAGCTTCATATGCCAGTTCACCAAACCTGAATCCAAGATATTCTTGTGACATGGAAGGACCGTCATTGAGTAATTCATTGCCTGATACAGATGGGATGAGAACATCGTGTTATGTTGAGATGCCTCTTGGTGCTGGAGCTACTGGTATGGGAGCCACTGAAGTGGGTATTGAAGGGCCATCTGAAGAAGGACCTTGCTACCATTTGGAGAACAATAGTTGGTTAGATAGAGATCAATCAAGACATTGCTTTTCATCGAATTCTTGTAATGAGCTCACATCCAGTGATTGGGGAAGATATGGAACACCTTTATTTTCATGGAATGGCCAGGTTGTTGGCAGAAGACAGCTTAAATCTCACCCCAGAGGAAACTACAGAGGTCATGGAGATGAATATGATGCATTTTTCAATATATTTGAAGGGGGTTCCCTTTTATATTGCAATATGTCTTTTGATGCACTTCTAAATGCCAGAAAGCAACTTGAAGAATTAGGTTTCCCTTGCAAAGCTGTAAATGATGGTCTTTGGCTGCAGATGCTTCTTAGTCAGAGGGTACAAGAAATTGCTGCTGATACATGCAAAGTTTGCTCCCTCATGAGTATGGCTTGCACTTGTCAGAAGCAATTTGCATTTTCACATGGAGCTTCTACCACTGGATCTTACGCACAAGAACATAATCAGAACATTATGCCTGGCAATGCGGGAAATATATATGTTGCTGAATCTTCTGCAGGCGAAAGAAATGGCCTTTTTAGACCTGTACGAGTACATGTTAGAGGTGCTATTGATGGGCTTGCAGGTATTGGCCGTGGAACTACATTTGTTCCAGCATCTGCTTCGCCACCTACACGTTTTGTCTTTTCTCGTGTACCATTTGGTGTTGGCAACAGAAACTATCCTCAGTCTGCAGCCAATGATGATTCAGAGACACGTGCTGACCCAAATGGAGACCTGGCTGGAGATGGCTTGACAGCTTTAGTTGGGCTAAGCCTGGGAGGGAGTAATGGAACAAATGTACATACAGAGCTAACACAAAGGGGATATGAAATGGGCTTGCAAAGCAGCATGTCTGGAACTACTGCTGGAGGTGCAAGTACTGGTGGCATTCCCATGCAGATGTTAGAGACACCGGAACATACCATTGGTATAGAATGGGACAATGTCAACAGTAGTTCCATATCACTGGATTTGAAAACACCTTTAAGCCATTTCCCCCCTTTTCGCTTTGGTGTACGTTTTGAGGATGTGCATAGGCTTGGTGATGGCCAGGTCAAGCATTCTCCAGAAGTTTTCTATGCTGGTTCTTTGTGGAAGGTCAGTGTACAAGCTTTTAATGATGAAGACCCCCAGGGACGGCGAACCCTTGGGTTGTTTCTTCACCGTCGGAAGGCAGAGGTAACTGATATACATAGAAAGGTGCATATGTATGTTGACTCGCGGGAAAAGGTGACTGCACGCTACCAGTTGACCGTCCCATCCAAGAGAGAAATGACGGTGTTTGGAAGCTTTAAACAAACAGGCACTCTTCTACCTAAAGCTCCTAAGGGATGGGGATGGCGAACTGCCCTGTTATTTGATGAGCTTGCTGATCTTCTTCAAAACGGTGCCCTAAGGGTCATTGCTGTAGTGCAGCTTGTTTAA
Predicted protein sequences of Glyma07g37660
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma07g37660.1 sequence type=predicted peptide gene model=Glyma07g37660 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MSMEEPQYREHPKAKIATIPPSQHSDGAAAELRGVDCNLASLCEHVQIEGFNSGSFSDIVVNAMGSTYRLHRLILSRSSYFRNMLHGPWKEAGAPVVTLHVDDKNVNDEAIAMALAYLYGHHPKLNDNNAFRVLAAASFLDLQDLCGICTDFIISELWTSNFLAYQVFAENQDYGIHGERVRTACWGYLCQSGGMELKEVLPKLSSQTLHALLTSNDLWIPNEEKRFELALHTFLAKSANCKVEHHAHGISGTESATSVHADSGSSKGKSVTDSCTSKRLETGMGKMSLKTDLEDPSTPSLLVKLADPVADFNDGVSVSNERVQQASYASSPNLNPRYSCDMEGPSLSNSLPDTDGMRTSCYVEMPLGAGATGMGATEVGIEGPSEEGPCYHLENNSWLDRDQSRHCFSSNSCNELTSSDWGRYGTPLFSWNGQVVGRRQLKSHPRGNYRGHGDEYDAFFNIFEGGSLLYCNMSFDALLNARKQLEELGFPCKAVNDGLWLQMLLSQRVQEIAADTCKVCSLMSMACTCQKQFAFSHGASTTGSYAQEHNQNIMPGNAGNIYVAESSAGERNGLFRPVRVHVRGAIDGLAGIGRGTTFVPASASPPTRFVFSRVPFGVGNRNYPQSAANDDSETRADPNGDLAGDGLTALVGLSLGGSNGTNVHTELTQRGYEMGLQSSMSGTTAGGASTGGIPMQMLETPEHTIGIEWDNVNSSSISLDLKTPLSHFPPFRFGVRFEDVHRLGDGQVKHSPEVFYAGSLWKVSVQAFNDEDPQGRRTLGLFLHRRKAEVTDIHRKVHMYVDSREKVTARYQLTVPSKREMTVFGSFKQTGTLLPKAPKGWGWRTALLFDELADLLQNGALRVIAVVQLV*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
