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Report for Sequence Feature Glyma07g36166

Feature Type:gene_model
Chromosome:Gm07
Start:41568367
stop:41571830
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma07g36166
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G53480AT Annotation by Michelle Graham. TAIR10: pleiotropic drug resistance 9 | chr3:19825366-19831644 FORWARD LENGTH=1450 SoyBaseE_val: 0ISS
GO:0000041GO-bp Annotation by Michelle Graham. GO Biological Process: transition metal ion transport SoyBaseN/AISS
GO:0006855GO-bp Annotation by Michelle Graham. GO Biological Process: drug transmembrane transport SoyBaseN/AISS
GO:0009926GO-bp Annotation by Michelle Graham. GO Biological Process: auxin polar transport SoyBaseN/AISS
GO:0010359GO-bp Annotation by Michelle Graham. GO Biological Process: regulation of anion channel activity SoyBaseN/AISS
GO:0048364GO-bp Annotation by Michelle Graham. GO Biological Process: root development SoyBaseN/AISS
GO:0071366GO-bp Annotation by Michelle Graham. GO Biological Process: cellular response to indolebutyric acid stimulus SoyBaseN/AISS
GO:0005886GO-cc Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane SoyBaseN/AISS
GO:0009506GO-cc Annotation by Michelle Graham. GO Cellular Compartment: plasmodesma SoyBaseN/AISS
GO:0016020GO-cc Annotation by Michelle Graham. GO Cellular Compartment: membrane SoyBaseN/AISS
GO:0000166GO-mf Annotation by Michelle Graham. GO Molecular Function: nucleotide binding SoyBaseN/AISS
GO:0005215GO-mf Annotation by Michelle Graham. GO Molecular Function: transporter activity SoyBaseN/AISS
GO:0005524GO-mf Annotation by Michelle Graham. GO Molecular Function: ATP binding SoyBaseN/AISS
GO:0016887GO-mf Annotation by Michelle Graham. GO Molecular Function: ATPase activity SoyBaseN/AISS
GO:0017111GO-mf Annotation by Michelle Graham. GO Molecular Function: nucleoside-triphosphatase activity SoyBaseN/AISS
GO:0042626GO-mf Annotation by Michelle Graham. GO Molecular Function: ATPase activity, coupled to transmembrane movement of substances SoyBaseN/AISS
KOG0061 KOG Transporter, ABC superfamily (Breast cancer resistance protein) JGI ISS
PTHR19241Panther ATP-BINDING CASSETTE TRANSPORTER JGI ISS
PTHR19241:SF96Panther JGI ISS
PF01061PFAM ABC-2 type transporter JGI ISS
UniRef100_B9RFG3UniRef Annotation by Michelle Graham. Most informative UniRef hit: ATP-binding cassette transporter, putative n=1 Tax=Ricinus communis RepID=B9RFG3_RICCO SoyBaseE_val: 0ISS
UniRef100_UPI000233F3B0UniRef Annotation by Michelle Graham. Best UniRef hit: UPI000233F3B0 related cluster n=1 Tax=unknown RepID=UPI000233F3B0 SoyBaseE_val: 0ISS

Expression Patterns of Glyma07g36166
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma07g36166 not represented in the dataset
Glyma07g36166 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma07g36166 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.07g234000 Wm82.a2.v1IGC As supplied by JGI

References for Glyma07g36166
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma07g36166
>Glyma07g36166.1   sequence type=CDS   gene model=Glyma07g36166   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
CTTCCCCTGATTGTTGTGGTGCATTCTTTTTTATACGTTCAAGGGGACATTTCTTACAATGGACACATGCTAGAAGAATTCATTCCTCAGAAATCCTCAGCGTATGTAAGCCAATATGATCTGCATATTCCAGAAATGACTGTGAGGGAAACACTTGATTTCTCAGCACGTTGTCAAGGCGTAGGAAGCCACTCCGAACTTCTGATGGAAATCAGTAGAAAGGAGAAAGAGGCAGGAATAGTCCCAGACCCTGATTTAGATGCATATATGGCAACATCAATTAAAGCTCTAAAGAGTAGCCTTCAGACAGACTATATTTTAAAGATACTTGGTCTTGATATATGTGCCAATACATCAGTTGATATAAGAAGAGGTATATCTGGTGGTCAAAAGAAAAGGTTAACTACAGGAGAGATGATTGTTGGACCAACAAAAGCACTCTTTATGGATGAAATATCCAATGGTTTAGACAGCTCCACTACTTTCCAGATTATCTCTTGTCTTCAGCATCTGGTGCATATCACAAATGCCACTGCATTAATTTCACTCCTTCAGCCAGCACCAGAGACCTTTGATCTCTTTGATGATATTGTTTTAATGGCAGAAGGGAAAATTGTGTACCACGGACCGCATGATTATATACTTGAGTTCTTTGAGGACTGTGGGTTTAAATGCCCACAAAGAAAAGGCACTGCTGACTTTCTTCAAGAAGTTACCTCTACGAAAGATCAAGCACGGTATTGGAATAGCTCAGAAAAACCTTACAGTTATGTTTCAATTGACCACCACAAGAATGCCCTTGTATTTAAAAAATACTCATTAACAAAATGGGAATTATTTAAGGCTTGCATGATGAGGGAAATTCTTCTAATGAAAAGAAACTCTTTTGTTTATGTATTCAAGTCAACACAGCTTGTCACTGTTGCATTTGTAGCAATGACTGTTTTCATTCGAACACAAATGGCTGTTGATGTGCTCCATGGGAATTATTTTATGGGTTCATCGTTTTATTCACTCATCATACTTCTCGTTGATGGATTTCCGGAACTATCTATGACTGTATCAAGACTTGCAGTGATTTACAAGCAAAAGGAGTTGTGTTTTTTTCCTGCCTGGGCTTATACAATTCCATCTGCTGTTTTAAAGATTCCGCTTTCATTGTTGGAATCTTTCATTTGGACAACACTTTCTTATTATGTCATTGTCATTGGGTTCTTTCGCCAGTTCCTTCTCTCATTTATCATACACATGACTTCGGTATCCATGTTTCGATTCATTGCCACAATTTGTCAAACTGTGGTTGCTTCTGTGACAGCTGGTACTATGACCATACTAGTTGTTTTACTATTTGGTGGCTTCATCATTCCAAAACAAGATAAATGGGGATTTTGGGTTTCTCCTTTGACATATGGAGAGATAGGCTTAACTGTGAATGAATTTCTTGCTCCTAGGTGGGAAAAGATGTCTGGAAACAGAACATTGGGCCAGCAAGTACTTGAAAGCCGATCATCATAA
Predicted protein sequences of Glyma07g36166
>Glyma07g36166.1   sequence type=predicted peptide   gene model=Glyma07g36166   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
LPLIVVVHSFLYVQGDISYNGHMLEEFIPQKSSAYVSQYDLHIPEMTVRETLDFSARCQGVGSHSELLMEISRKEKEAGIVPDPDLDAYMATSIKALKSSLQTDYILKILGLDICANTSVDIRRGISGGQKKRLTTGEMIVGPTKALFMDEISNGLDSSTTFQIISCLQHLVHITNATALISLLQPAPETFDLFDDIVLMAEGKIVYHGPHDYILEFFEDCGFKCPQRKGTADFLQEVTSTKDQARYWNSSEKPYSYVSIDHHKNALVFKKYSLTKWELFKACMMREILLMKRNSFVYVFKSTQLVTVAFVAMTVFIRTQMAVDVLHGNYFMGSSFYSLIILLVDGFPELSMTVSRLAVIYKQKELCFFPAWAYTIPSAVLKIPLSLLESFIWTTLSYYVIVIGFFRQFLLSFIIHMTSVSMFRFIATICQTVVASVTAGTMTILVVLLFGGFIIPKQDKWGFWVSPLTYGEIGLTVNEFLAPRWEKMSGNRTLGQQVLESRSS*






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