SoyBase
SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
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A newer version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT1G13920 | AT | Annotation by Michelle Graham. TAIR10: Remorin family protein | chr1:4758188-4759754 FORWARD LENGTH=345 | SoyBase | E_val: 1.00E-40 | ISS |
| GO:0008150 | GO-bp | Annotation by Michelle Graham. GO Biological Process: biological process | SoyBase | N/A | ISS |
| GO:0005737 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm | SoyBase | N/A | ISS |
| GO:0003677 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: DNA binding | SoyBase | N/A | ISS |
| PF03763 | PFAM | Remorin, C-terminal region | JGI | ISS | |
| UniRef100_B9RCW8 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RCW8_RICCO | SoyBase | E_val: 3.00E-44 | ISS |
| UniRef100_I1NDJ3 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein (Fragment) n=1 Tax=Glycine max RepID=I1NDJ3_SOYBN | SoyBase | E_val: 5.00E-115 | ISS |
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Glyma07g35321 not represented in the dataset |
Glyma07g35321 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|---|---|---|
| Glyma.07g226700 | Wm82.a2.v1 | IGC | As supplied by JGI |
| Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma07g35321.2 sequence type=transcript gene model=Glyma07g35321 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high TGGAACACATAAAAACCCATTGGTCTCTCTCTCATGTCATGCATAGATGCTAAAGACATCATTGAACCAGTTGTTCTTTATACTTTATACCCTTTGGAACTTCCACAGGCTAGTGTGCATTAAATGTTCAAAGGGACACAATTTTTATTTAAAGTGAAAATCTGACATATATAAATATTTTTTTCTTCTTCCTAGAAAATTTACTTTGGTCTTTTACAAATTTTCATCTGAGAAATCTGCTAGATTAGAAATTGTGGTCAAGAAAACCAATTAAAATCCCATGCTTAATGGTAAGTTTCCAAGGAAGAAAAGAATACCTGTCTTCCCCCACAAGGCACTTAATTGAGTTCCAAACCAGACAACACATGCAAGGTATATTTAACCTTGCTTGTACTAGGTTTCTTCCTTTTCAAATAAGCACCAACCAACCACTCTGATTAGTTGATAACAAAGCATTTGCTAATAAAAGGGAAGTTAGAGATCAGAAAATTCTTATATTTCTTCCTATAGAATGGAAACTTTGATGAAGCAGATAAGAACGAAATTAACTGGTGCAGAGGAGAAGAATAAAGCTGATCTGGGTGGCAGCAGGGATCAGAAAGTTACAACACAGAAAACCCCATCCTTCAAAGATAAGAAAAAGGCTCAGAATTGGTTTCAGAGACAATTTTCAAGAACCATGAGTCATGATTATGACGCAGAAATGGAGCTTGCCACAGCAGTAGCTGCTGCTGCATTCGCAATTTTTTCACTAGAGGGTTCACTAATTCCACAGCAAAAGAAAAAGAGGGAGACACCTTTGACCAGAGGCAAAAGCAAAGTGGATGATACAAAACCTCCAATTTCTCAGTTTGGTGGCACATCAAGGCAGTTCTCAGTGGATTTGAAGAGGCCTGAAAAAACCATGACCCCTGCACCATCAATGAGGAGGAGTTCAACTTTTGGTGAAAAGGTGAAGAGTAGCACTGATGGTAAAAAACCTGAGATCCAAGCCCCAAAAAGGACTACAACTTTTGGTGATGAGCACTCGGTGAACACTGGTGAAATAAAACCTGAGACCCCACTACCAAGAGTTGCTCCACCAGTTCATCAGCAAATGCCTTTAAGGCCACCGCCACCTCCATTGCCACCACCGCCACCGCCACCAATCAGGCAGACTTCAGCAAGACCAGGTACCAATGGAACAAAAGCAGATGCCTGGGAGAGGGAGGAGTTGGAAAAGATCAAAGAAAGGTACGAGAAGTTGTTGGAAACGATAGATTCATGGGAAAAGAGGAAGAAGGCGAAAGCAATACGCAAGCTAAATAAGCATCAGCATAGTGAAAGTGAACGGAAAAGGGCGAAAGTGTTGAAGAAATATCAAGATAAGATGAGCTATATTAGTCAAATTGCAGGGGGAGCAAGAGCACAAGCAGAGGAAAGACGAAGGAGTGAAGTGCTCAAAGCAAAAGAGAAGGCAAATATAATTAGAACAACGGGCAAAATTCCAGGGCCATGCTCTTGCTTCTAACAACACCAATTATATATATGTACATATTACATAACATCACTAATTAAAGTTTGGGTATAACAAAAAGAATATGTAATTAATTATCTGTTTTACAATTCTGTGATTTCTAACTGTAAAGCTCTCTTTACACATTGTAGTGGGA >Glyma07g35321.3 sequence type=transcript gene model=Glyma07g35321 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high TGGAACACATAAAAACCCATTGGTCTCTCTCTCATGTCATGCATAGATGCTAAAGACATCATTGAACCAGTTGTTCTTTATACTTTATACCCTTTGGAACTTCCACAGGCTAGTGTGCATTAAATGTTCAAAGGGACACAATTTTTATTTAAAGTGAAAATCTGACATATATAAATATTTTTTTCTTCTTCCTAGAAAATTTACTTTGGTCTTTTACAAATTTTCATCTGAGAAATCTGCTAGATTAGAAATTGTGGTCAAGAAAACCAATTAAAATCCCATGCTTAATGGTAAGTTTCCAAGGAAGAAAAGAATACCTGTCTTCCCCCACAAGGCACTTAATTGAGTTCCAAACCAGACAACACATGCAAGGTATATTTAACCTTGCTTGTACTAGGTTTCTTCCTTTTCAAATAAGCACCAACCAACCACTCTGATTAGTTGATAACAAAGCATTTGCTAATAAAAGGGAAGTTAGAGATCAGAAAATTCTTATATTTCTTCCTATAGAATGGAAACTTTGATGAAGCAGATAAGAGGAGAAGAATAAAGCTGATCTGGGTGGCAGCAGGGATCAGAAAGTTACAACACAGAAAACCCCATCCTTCAAAGATAAGAAAAAGGCTCAGAATTGGTTTCAGAGACAATTTTCAAGAACCATGAGTCATGATTATGACGCAGAAATGGAGCTTGCCACAGCAGTAGCTGCTGCTGCATTCGCAATTTTTTCACTAGAGGGTTCACTAATTCCACAGCAAAAGAAAAAGAGGGAGACACCTTTGACCAGAGGCAAAAGCAAAGTGGATGATACAAAACCTCCAATTTCTCAGTTTGGTGGCACATCAAGGCAGTTCTCAGTGGATTTGAAGAGGCCTGAAAAAACCATGACCCCTGCACCATCAATGAGGAGGAGTTCAACTTTTGGTGAAAAGGTGAAGAGTAGCACTGATGGTAAAAAACCTGAGATCCAAGCCCCAAAAAGGACTACAACTTTTGGTGATGAGCACTCGGTGAACACTGGTGAAATAAAACCTGAGACCCCACTACCAAGAGTTGCTCCACCAGTTCATCAGCAAATGCCTTTAAGGCCACCGCCACCTCCATTGCCACCACCGCCACCGCCACCAATCAGGCAGACTTCAGCAAGACCAGGTACCAATGGAACAAAAGCAGATGCCTGGGAGAGGGAGGAGTTGGAAAAGATCAAAGAAAGGTACGAGAAGTTGTTGGAAACGATAGATTCATGGGAAAAGAGGAAGAAGGCGAAAGCAATACGCAAGCTAAATAAGCATCAGCATAGTGAAAGTGAACGGAAAAGGGCGAAAGTGTTGAAGAAATATCAAGATAAGATGAGCTATATTAGTCAAATTGCAGGGGGAGCAAGAGCACAAGCAGAGGAAAGACGAAGGAGTGAAGTGCTCAAAGCAAAAGAGAAGGCAAATATAATTAGAACAACGGGCAAAATTCCAGGGCCATGCTCTTGCTTCTAACAACACCAATTATATATATGTACATATTACATAACATCACTAATTAAAGTTTGGGTATAACAAAAAGAATATGTAATTAATTATCTGTTTTACAATTCTGTGATTTCTAACTGTAAAGCTCTCTTTACACATTGTAGTGGGA
>Glyma07g35321.1 sequence type=CDS gene model=Glyma07g35321 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGAAACTTTGATGAAGCAGATAAGAACGAAATTAACTGGTGCAGAGGAGAAGAATAAAGCTGATCTGGGTGGCAGCAGGGATCAGAAAGTTACAACACAGAAAACCCCATCCTTCAAAGATAAGAAAAAGGCTCAGAATTGGTTTCAGAGACAATTTTCAAGAACCATGAGTCATGATTATGACGCAGAAATGGAGCTTGCCACAGCAGTAGCTGCTGCTGCATTCGCAATTTTTTCACTAGAGGGTTCACTAATTCCACAGCAAAAGAAAAAGAGGGAGACACCTTTGACCAGAGGCAAAAGCAAAGTGGATGATACAAAACCTCCAATTTCTCAGTTTGGTGGCACATCAAGGCAGTTCTCAGGGTTTAAAAATGACCAAAGTAACAATGCTACAGTGGATTTGAAGAGGCCTGAAAAAACCATGACCCCTGCACCATCAATGAGGAGGAGTTCAACTTTTGGTGAAAAGGTGAAGAGTAGCACTGATGGTAAAAAACCTGAGATCCAAGCCCCAAAAAGGACTACAACTTTTGGTGATGAGCACTCGGTGAACACTGGTGAAATAAAACCTGAGACCCCACTACCAAGAGTTGCTCCACCAGTTCATCAGCAAATGCCTTTAAGGCCACCGCCACCTCCATTGCCACCACCGCCACCGCCACCAATCAGGCAGACTTCAGCAAGACCAGGTACCAATGGAACAAAAGCAGATGCCTGGGAGAGGGAGGAGTTGGAAAAGATCAAAGAAAGGTACGAGAAGTTGTTGGAAACGATAGATTCATGGGAAAAGAGGAAGAAGGCGAAAGCAATACGCAAGCTAAATAAGCATCAGCATAGTGAAAGTGAACGGAAAAGGGCGAAAGTGTTGAAGAAATATCAAGATAAGATGAGCTATATTAGTCAAATTGCAGGGGGAGCAAGAGCACAAGCAGAGGAAAGACGAAGGAGTGAAGTGCTCAAAGCAAAAGAGAAGGCAAATATAATTAGAACAACGGGCAAAATTCCAGGGCCATGCTCTTGCTTCTAA >Glyma07g35321.2 sequence type=CDS gene model=Glyma07g35321 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGAAACTTTGATGAAGCAGATAAGAACGAAATTAACTGGTGCAGAGGAGAAGAATAAAGCTGATCTGGGTGGCAGCAGGGATCAGAAAGTTACAACACAGAAAACCCCATCCTTCAAAGATAAGAAAAAGGCTCAGAATTGGTTTCAGAGACAATTTTCAAGAACCATGAGTCATGATTATGACGCAGAAATGGAGCTTGCCACAGCAGTAGCTGCTGCTGCATTCGCAATTTTTTCACTAGAGGGTTCACTAATTCCACAGCAAAAGAAAAAGAGGGAGACACCTTTGACCAGAGGCAAAAGCAAAGTGGATGATACAAAACCTCCAATTTCTCAGTTTGGTGGCACATCAAGGCAGTTCTCAGTGGATTTGAAGAGGCCTGAAAAAACCATGACCCCTGCACCATCAATGAGGAGGAGTTCAACTTTTGGTGAAAAGGTGAAGAGTAGCACTGATGGTAAAAAACCTGAGATCCAAGCCCCAAAAAGGACTACAACTTTTGGTGATGAGCACTCGGTGAACACTGGTGAAATAAAACCTGAGACCCCACTACCAAGAGTTGCTCCACCAGTTCATCAGCAAATGCCTTTAAGGCCACCGCCACCTCCATTGCCACCACCGCCACCGCCACCAATCAGGCAGACTTCAGCAAGACCAGGTACCAATGGAACAAAAGCAGATGCCTGGGAGAGGGAGGAGTTGGAAAAGATCAAAGAAAGGTACGAGAAGTTGTTGGAAACGATAGATTCATGGGAAAAGAGGAAGAAGGCGAAAGCAATACGCAAGCTAAATAAGCATCAGCATAGTGAAAGTGAACGGAAAAGGGCGAAAGTGTTGAAGAAATATCAAGATAAGATGAGCTATATTAGTCAAATTGCAGGGGGAGCAAGAGCACAAGCAGAGGAAAGACGAAGGAGTGAAGTGCTCAAAGCAAAAGAGAAGGCAAATATAATTAGAACAACGGGCAAAATTCCAGGGCCATGCTCTTGCTTCTAA >Glyma07g35321.3 sequence type=CDS gene model=Glyma07g35321 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGAGTCATGATTATGACGCAGAAATGGAGCTTGCCACAGCAGTAGCTGCTGCTGCATTCGCAATTTTTTCACTAGAGGGTTCACTAATTCCACAGCAAAAGAAAAAGAGGGAGACACCTTTGACCAGAGGCAAAAGCAAAGTGGATGATACAAAACCTCCAATTTCTCAGTTTGGTGGCACATCAAGGCAGTTCTCAGTGGATTTGAAGAGGCCTGAAAAAACCATGACCCCTGCACCATCAATGAGGAGGAGTTCAACTTTTGGTGAAAAGGTGAAGAGTAGCACTGATGGTAAAAAACCTGAGATCCAAGCCCCAAAAAGGACTACAACTTTTGGTGATGAGCACTCGGTGAACACTGGTGAAATAAAACCTGAGACCCCACTACCAAGAGTTGCTCCACCAGTTCATCAGCAAATGCCTTTAAGGCCACCGCCACCTCCATTGCCACCACCGCCACCGCCACCAATCAGGCAGACTTCAGCAAGACCAGGTACCAATGGAACAAAAGCAGATGCCTGGGAGAGGGAGGAGTTGGAAAAGATCAAAGAAAGGTACGAGAAGTTGTTGGAAACGATAGATTCATGGGAAAAGAGGAAGAAGGCGAAAGCAATACGCAAGCTAAATAAGCATCAGCATAGTGAAAGTGAACGGAAAAGGGCGAAAGTGTTGAAGAAATATCAAGATAAGATGAGCTATATTAGTCAAATTGCAGGGGGAGCAAGAGCACAAGCAGAGGAAAGACGAAGGAGTGAAGTGCTCAAAGCAAAAGAGAAGGCAAATATAATTAGAACAACGGGCAAAATTCCAGGGCCATGCTCTTGCTTCTAA
>Glyma07g35321.1 sequence type=predicted peptide gene model=Glyma07g35321 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high METLMKQIRTKLTGAEEKNKADLGGSRDQKVTTQKTPSFKDKKKAQNWFQRQFSRTMSHDYDAEMELATAVAAAAFAIFSLEGSLIPQQKKKRETPLTRGKSKVDDTKPPISQFGGTSRQFSGFKNDQSNNATVDLKRPEKTMTPAPSMRRSSTFGEKVKSSTDGKKPEIQAPKRTTTFGDEHSVNTGEIKPETPLPRVAPPVHQQMPLRPPPPPLPPPPPPPIRQTSARPGTNGTKADAWEREELEKIKERYEKLLETIDSWEKRKKAKAIRKLNKHQHSESERKRAKVLKKYQDKMSYISQIAGGARAQAEERRRSEVLKAKEKANIIRTTGKIPGPCSCF* >Glyma07g35321.2 sequence type=predicted peptide gene model=Glyma07g35321 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high METLMKQIRTKLTGAEEKNKADLGGSRDQKVTTQKTPSFKDKKKAQNWFQRQFSRTMSHDYDAEMELATAVAAAAFAIFSLEGSLIPQQKKKRETPLTRGKSKVDDTKPPISQFGGTSRQFSVDLKRPEKTMTPAPSMRRSSTFGEKVKSSTDGKKPEIQAPKRTTTFGDEHSVNTGEIKPETPLPRVAPPVHQQMPLRPPPPPLPPPPPPPIRQTSARPGTNGTKADAWEREELEKIKERYEKLLETIDSWEKRKKAKAIRKLNKHQHSESERKRAKVLKKYQDKMSYISQIAGGARAQAEERRRSEVLKAKEKANIIRTTGKIPGPCSCF* >Glyma07g35321.3 sequence type=predicted peptide gene model=Glyma07g35321 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MSHDYDAEMELATAVAAAAFAIFSLEGSLIPQQKKKRETPLTRGKSKVDDTKPPISQFGGTSRQFSVDLKRPEKTMTPAPSMRRSSTFGEKVKSSTDGKKPEIQAPKRTTTFGDEHSVNTGEIKPETPLPRVAPPVHQQMPLRPPPPPLPPPPPPPIRQTSARPGTNGTKADAWEREELEKIKERYEKLLETIDSWEKRKKAKAIRKLNKHQHSESERKRAKVLKKYQDKMSYISQIAGGARAQAEERRRSEVLKAKEKANIIRTTGKIPGPCSCF*
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||
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