Report for Sequence Feature Glyma07g33310
Feature Type: gene_model
Chromosome: Gm07
Start: 38232861
stop: 38237885
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma07g33310
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT2G15730 AT
Annotation by Michelle Graham. TAIR10: P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr2:6849797-6851881 FORWARD LENGTH=344
SoyBase E_val: 0 ISS
GO:0008150 GO-bp
Annotation by Michelle Graham. GO Biological Process: biological process
SoyBase N/A ISS
GO:0005794 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: Golgi apparatus
SoyBase N/A ISS
GO:0003674 GO-mf
Annotation by Michelle Graham. GO Molecular Function: molecular function
SoyBase N/A ISS
UniRef100_G7JMG0 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Nodulation protein H n=1 Tax=Medicago truncatula RepID=G7JMG0_MEDTR
SoyBase E_val: 0 ISS
UniRef100_I1KLY1 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1KLY1_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma07g33310
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Paralogs of Glyma07g33310
Paralog Evidence Comments
Glyma02g15180 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma07g33310 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.07g210900 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma07g33310
Coding sequences of Glyma07g33310
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma07g33310.1 sequence type=CDS gene model=Glyma07g33310 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGCAGATGATCTCTCTTCCTTCGCCAAGGATGCTTTGCTTGTGAAGGGTTTGAAGAGTTCCACTTTGGTGTGGAGGCTTATTGTTTTGACCCTTGCAATGGTCTCTGGCGTGTATATATGTTCAATTTGTCTGAAGCAGATAGGCACTAGCAGCAAGATTGGTTTTTTAGACATCAAGGTTGTTCAAAAGCCATGCCCGGAACCTAACATTGAACCTTGGGAGATTCCTTTTGTGCATTACCCTCACCCCAAAACTTACAGCAGGGCGGAATGTGCTTGCCACCCTGTGCGCTATTTCGCTATTCTGTCAATGCAGAGATCCGGGAGTGGATGGTTTGAGACGTTTTTAAACAGTCATGCTAACATAAGCTCAAATGGGGAAATCTTTTCGGTTAAGGTGAGAAGGAGTAACATGTCAACAATAACAGAGACTCTGGATACAATTTATAATCTAGACTGGTTAAGTAGTGCTTCAAAAAATGAGTGCACCACTGCTGTTGGTTTGAAGTGGATGCTTAATCAGGGATTGATGCAGCATCATGAAGAAATTGCTGAGTATTTCAGAATACACGGTGTTTCGCTCATATTTCTTTTCAGAAGGAATCTTTTGCGCCGGATGGTTTCTGTACTTGCAAATGAATATGATAGGAATGCTAAGCTATTAAACGGGACTCACAAATCTCATGTTCATTCACCAAAGGAGGCAGAAATACTTGCAAAATACAAGCCCACAATCAATTCAACTTTGCTGATTGCACAACTTAAACAAGTGAACGAAACCACCACCAAAGCTTTGGAATATTTCAAGAGCACCAGGCACATTATCCTGTACTATGAAGACATCGTCAAAAACCGCACTAAATTAAGGGACGTTCAGGATTTTCTAAAGGTTCCTCAAATGGATTTAAAGAGTCGTCAGGTGAAGATACATAAAGGGTCCTTATCTAGCCAAGTTGAAAACTGGAATGATATAAGCAAGGCACTAACAGGAACACCATACGAGAGTTTCATCCACGAAGATTATCGTAGGTAG
Predicted protein sequences of Glyma07g33310
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma07g33310.1 sequence type=predicted peptide gene model=Glyma07g33310 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MADDLSSFAKDALLVKGLKSSTLVWRLIVLTLAMVSGVYICSICLKQIGTSSKIGFLDIKVVQKPCPEPNIEPWEIPFVHYPHPKTYSRAECACHPVRYFAILSMQRSGSGWFETFLNSHANISSNGEIFSVKVRRSNMSTITETLDTIYNLDWLSSASKNECTTAVGLKWMLNQGLMQHHEEIAEYFRIHGVSLIFLFRRNLLRRMVSVLANEYDRNAKLLNGTHKSHVHSPKEAEILAKYKPTINSTLLIAQLKQVNETTTKALEYFKSTRHIILYYEDIVKNRTKLRDVQDFLKVPQMDLKSRQVKIHKGSLSSQVENWNDISKALTGTPYESFIHEDYRR*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
