Report for Sequence Feature Glyma07g31150
Feature Type: gene_model
Chromosome: Gm07
Start: 36104540
stop: 36105754
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma07g31150
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT1G61170 AT
Annotation by Michelle Graham. TAIR10: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G11125.1); Has 54 Blast hits to 54 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 0; Plants - 34; Viruses - 1; Other Eukaryotes - 2 (source: NCBI BLink). | chr1:22549718-22550473 FORWARD L
SoyBase E_val: 4.00E-10 ISS
GO:0006499 GO-bp
Annotation by Michelle Graham. GO Biological Process: N-terminal protein myristoylation
SoyBase N/A ISS
GO:0005634 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: nucleus
SoyBase N/A ISS
GO:0003674 GO-mf
Annotation by Michelle Graham. GO Molecular Function: molecular function
SoyBase N/A ISS
UniRef100_I1KLF7 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1KLF7_SOYBN
SoyBase E_val: 2.00E-116 ISS
UniRef100_Q1W1G0 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: CK25 n=1 Tax=Nicotiana tabacum RepID=Q1W1G0_TOBAC
SoyBase E_val: 2.00E-09 ISS
Expression Patterns of Glyma07g31150
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Paralogs of Glyma07g31150
Paralog Evidence Comments
Glyma13g25331 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma07g31150 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.07g192300 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma07g31150
Coding sequences of Glyma07g31150
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma07g31150.2 sequence type=CDS gene model=Glyma07g31150 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGGTTGTTGTGTTAGTAGTCACAAAACCCCAACCTCTTCTTCACTAGCAAAATTCCATGATCCACCAAAACCTCTCATTAAACCTTCAGAAAGCAGTAGTGCAGAGGAGGCTGTGAAGGAACTGCTCTTGGAAACCCCCAAATGGAACCCGACAACCTTTGCCAAATCAAAACCACAAAAGCCACACCAAAACACAAACTTTCACAGATTTAAGGATGAAAAAAGCAAGGTTGAGAAGAGGGCATTGACATTGTCCATTTACAAAGCCGAAGACACCACCTCAGCAGAAGTTTGCAGCTTGAGCGAAACCGTGTCCACAGATACTTCAATCGCCAACCAGATAGAAGAAACGCGCAAAAGGGTCGATACATCTCAGCCCAAATTGCAGAAAAATCGTTCATTTCCCGGTGAAAGAAGAGAGAGAACGGTGGTGCATGGCGCAAGGAACAATAGTGTTGGGTCTGTGAAGTTGGTTCAGTGCAGAGACCAAACAGCTAAGAAAATTGGTAACGGCGGAACGCGTCGCCGGAGAGATCCCACCGAGAATTCTCTCCGGCGGTCAAGGTCGCCGGCCACCGTTTCCGGCGCCGGAGAAGCTAGGCCCGTCACGGGTCGGAGCCCATCTGTTAAAAAACTTGACCGGTCCACTACAAGGATCAGAACCGGAACGGCGGAAAACGGTTGCCGGAAAAGGGAAAATCCGACGACGGCGGGGAAATGGTATTCCGCCGGTGAGTCATTGGAGAATCCACTTGTGTCATTGGAATGCTTCATCTTTACATAG
Predicted protein sequences of Glyma07g31150
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma07g31150.2 sequence type=predicted peptide gene model=Glyma07g31150 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MGCCVSSHKTPTSSSLAKFHDPPKPLIKPSESSSAEEAVKELLLETPKWNPTTFAKSKPQKPHQNTNFHRFKDEKSKVEKRALTLSIYKAEDTTSAEVCSLSETVSTDTSIANQIEETRKRVDTSQPKLQKNRSFPGERRERTVVHGARNNSVGSVKLVQCRDQTAKKIGNGGTRRRRDPTENSLRRSRSPATVSGAGEARPVTGRSPSVKKLDRSTTRIRTGTAENGCRKRENPTTAGKWYSAGESLENPLVSLECFIFT*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
