Report for Sequence Feature Glyma07g30970
Feature Type: gene_model
Chromosome: Gm07
Start: 35936945
stop: 35940863
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma07g30970
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT4G21470 AT
Annotation by Michelle Graham. TAIR10: riboflavin kinase/FMN hydrolase | chr4:11431284-11433197 FORWARD LENGTH=379
SoyBase E_val: 0 ISS
GO:0008152 GO-bp
Annotation by Michelle Graham. GO Biological Process: metabolic process
SoyBase N/A ISS
GO:0009231 GO-bp
Annotation by Michelle Graham. GO Biological Process: riboflavin biosynthetic process
SoyBase N/A ISS
GO:0016036 GO-bp
Annotation by Michelle Graham. GO Biological Process: cellular response to phosphate starvation
SoyBase N/A ISS
GO:0019375 GO-bp
Annotation by Michelle Graham. GO Biological Process: galactolipid biosynthetic process
SoyBase N/A ISS
GO:0045892 GO-bp
Annotation by Michelle Graham. GO Biological Process: negative regulation of transcription, DNA-dependent
SoyBase N/A ISS
GO:0009507 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: chloroplast
SoyBase N/A ISS
GO:0003824 GO-mf
Annotation by Michelle Graham. GO Molecular Function: catalytic activity
SoyBase N/A ISS
GO:0003919 GO-mf
Annotation by Michelle Graham. GO Molecular Function: FMN adenylyltransferase activity
SoyBase N/A ISS
GO:0008531 GO-mf
Annotation by Michelle Graham. GO Molecular Function: riboflavin kinase activity
SoyBase N/A ISS
GO:0016787 GO-mf
Annotation by Michelle Graham. GO Molecular Function: hydrolase activity
SoyBase N/A ISS
KOG3110
KOG
Riboflavin kinase
JGI ISS
PTHR22749 Panther
RIBOFLAVIN KINASE/FMN ADENYLYLTRANSFERASE
JGI ISS
PF00702 PFAM
haloacid dehalogenase-like hydrolase
JGI ISS
PF01687 PFAM
Riboflavin kinase
JGI ISS
UniRef100_B7FII7 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Riboflavin kinase n=3 Tax=Medicago truncatula RepID=B7FII7_MEDTR
SoyBase E_val: 0 ISS
UniRef100_I1KLD6 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1KLD6_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma07g30970
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma07g30970
Paralog Evidence Comments
Glyma08g06330 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma07g30970 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.07g190300 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma07g30970
Coding sequences of Glyma07g30970
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma07g30970.1 sequence type=CDS gene model=Glyma07g30970 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGTCGGTGGCGAAGAAGTTGATTAGATGCGTCATCCTTGACTTGGACGGCACGCTGCTCAACACAGATGGCATCGTAGGCAACGTTTTGAAGGTTATGTTAGGTAAATACGGAAAGGAATGGGACGGAAGAGAAGCTCAGAAGATAATTGGAACGACGCCGTTTGAGGCCGCTGCTGCGGTTGTGCAAGATTATCAACTTCCCTGCTCCGCCATTGAATTCCTCTCCGAAATTTCGCCACTCTTCTCTGACCAGTGGTGCAACATTAAAGCACTTCCTGGTGCTAATAGGTTGGTTAAACATTTGAAGAGTCATGGAGTTCCTATGGCCTTGGCGTCAAACTCTCCAAGGGAAAGCATCGAAGCCAAAATATCCTATCATGATGGATGGAAGAATTCTTTCTCTGTTATAATTGGTGGAGATGAAGTAAGAACAGGGAAACCTTCCCCTGAAATATTCCTTGAAGCTGCTAGGAGGTTAAACATGGAGCCTTCCAGCTGTCTTGTTATTGAAGACTCTCTACCTGGGGTTACTGCAGGAAAGACTGCTGAAATGGAAGTAGTTGTTGTACCATCACTTCCAAAACAGTCGCATCTCTATACTGCAGCAGATGAGGTGATCAATTCCCTACTTGATTTGCGACTCGAAAAGTGGGGTCTGCCTCCATTTGAAGATTGGGTGGAGGGAACTTTGCCCGTAGATCCCTGGTATATTGGTGGTCCTGTTGTCAAGGGATTTGGTCGTGGCTCAAAGGTACTTGGGATCCCTACAGCCAATTTATCAACAGAGGGCTATTCAGATCTCCTTTCAGAGTATCCTGCAGGTGTTTATTTTGGTTGGGCTGGATTGTCGGCAAGAGGTGTTTTTAAAATGGTGATGAGCATTGGTTGGAATCCATATTTCAACAACAAAGAAAAGGCTATAGAACCATGGTTACTCCATGACTTTAATGAAGATTTCTATGGGGAAGAACTGCGGCTTGTTATAGTTGGTTACATACGTCCCGAGGTCAATTTTTCATCCCTTGAAAGCTTGGTAGCTAAAATTCATGAAGATCGAAGAGTTGCTGAGAGGGCTCTTGATCTTCCCTTATATTCAAGTTTTAAGAATGATTCGTATTTGAGAAGCTCTTAG
Predicted protein sequences of Glyma07g30970
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma07g30970.1 sequence type=predicted peptide gene model=Glyma07g30970 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MSVAKKLIRCVILDLDGTLLNTDGIVGNVLKVMLGKYGKEWDGREAQKIIGTTPFEAAAAVVQDYQLPCSAIEFLSEISPLFSDQWCNIKALPGANRLVKHLKSHGVPMALASNSPRESIEAKISYHDGWKNSFSVIIGGDEVRTGKPSPEIFLEAARRLNMEPSSCLVIEDSLPGVTAGKTAEMEVVVVPSLPKQSHLYTAADEVINSLLDLRLEKWGLPPFEDWVEGTLPVDPWYIGGPVVKGFGRGSKVLGIPTANLSTEGYSDLLSEYPAGVYFGWAGLSARGVFKMVMSIGWNPYFNNKEKAIEPWLLHDFNEDFYGEELRLVIVGYIRPEVNFSSLESLVAKIHEDRRVAERALDLPLYSSFKNDSYLRSS*