Glyma07g30781 - SoyBase

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Report for Sequence Feature Glyma07g30781

Feature Type:	gene_model
Chromosome:	Gm07
Start:	35740046
stop:	35747087
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma07g30781

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT1G65790	AT	Annotation by Michelle Graham. TAIR10: receptor kinase 1 \| chr1:24468932-24472329 FORWARD LENGTH=843	SoyBase	E_val: 6.00E-38	ISS
GO:0006468	GO-bp	Annotation by Michelle Graham. GO Biological Process: protein phosphorylation	SoyBase	N/A	ISS
GO:0046777	GO-bp	Annotation by Michelle Graham. GO Biological Process: protein autophosphorylation	SoyBase	N/A	ISS
GO:0048544	GO-bp	Annotation by Michelle Graham. GO Biological Process: recognition of pollen	SoyBase	N/A	ISS
GO:0005634	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: nucleus	SoyBase	N/A	ISS
GO:0005886	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane	SoyBase	N/A	ISS
GO:0016020	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: membrane	SoyBase	N/A	ISS
GO:0004672	GO-mf	Annotation by Michelle Graham. GO Molecular Function: protein kinase activity	SoyBase	N/A	ISS
GO:0004674	GO-mf	Annotation by Michelle Graham. GO Molecular Function: protein serine/threonine kinase activity	SoyBase	N/A	ISS
GO:0005524	GO-mf	Annotation by Michelle Graham. GO Molecular Function: ATP binding	SoyBase	N/A	ISS
GO:0016301	GO-mf	Annotation by Michelle Graham. GO Molecular Function: kinase activity	SoyBase	N/A	ISS
GO:0016772	GO-mf	Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring phosphorus-containing groups	SoyBase	N/A	ISS
GO:0019199	GO-mf	Annotation by Michelle Graham. GO Molecular Function: transmembrane receptor protein kinase activity	SoyBase	N/A	ISS
GO:0030246	GO-mf	Annotation by Michelle Graham. GO Molecular Function: carbohydrate binding	SoyBase	N/A	ISS
PTHR24420	Panther	FAMILY NOT NAMED	JGI		ISS
PTHR24420:SF430	Panther	SUBFAMILY NOT NAMED	JGI		ISS
PF07714	PFAM	Protein tyrosine kinase	JGI		ISS
UniRef100_G7JSW6	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Serine/threonine protein kinase n=1 Tax=Medicago truncatula RepID=G7JSW6_MEDTR	SoyBase	E_val: 5.00E-66	ISS
UniRef100_UPI0002338037	UniRef	Annotation by Michelle Graham. Best UniRef hit: UPI0002338037 related cluster n=1 Tax=unknown RepID=UPI0002338037	SoyBase	E_val: 5.00E-99	ISS

Expression Patterns of Glyma07g30781

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma07g30781 not represented in the dataset	Glyma07g30781 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma07g30781 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.07g188600	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma07g30781

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma07g30781

Limit To All Plant Sequences

>Glyma07g30781.1   sequence type=CDS   gene model=Glyma07g30781   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTCACCGGAATATGCGATGGAAGGACGATATTCAACAAAATCTGATGTATTTAGCTTTGGAGTCTTACTGCTAGAGATTATTGCTGGCAAGAGGAACACAGATTATTGCAAAGAAAGAGCCTCCACAAATTTGATTGGATACGTGTGGATACTTTGGACAGAAGGAAGGGTCTTGGATATAGTTGATTCAACACTGTGTCAGTCTTATCCCCCTGCTCTTGTTCTGAGGTGCATTCAAATTGGTCTATTGCGTGTGCAAGAAAATGCCATCAATAGACCATCCATGCTAGAAGTTGTTTTCATGCTAGGCAATGAAACACCTCTTTCCCCACCCAAAAAGCCAGCATTTTTATTCAATGAGAACCAAGATTTGCCTGAGTCATCAACATCAGGAGGAGGATCTTCAATAAATGAAGTAACAGCTACTAGCATCAGTGCTCGCTAA

Predicted protein sequences of Glyma07g30781

Limit To All Plant Sequences

>Glyma07g30781.1   sequence type=predicted peptide   gene model=Glyma07g30781   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MSPEYAMEGRYSTKSDVFSFGVLLLEIIAGKRNTDYCKERASTNLIGYVWILWTEGRVLDIVDSTLCQSYPPALVLRCIQIGLLRVQENAINRPSMLEVVFMLGNETPLSPPKKPAFLFNENQDLPESSTSGGGSSINEVTATSISAR*

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