Report for Sequence Feature Glyma07g30210
Feature Type: gene_model
Chromosome: Gm07
Start: 35262290
stop: 35269060
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma07g30210
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT2G14170 AT
Annotation by Michelle Graham. TAIR10: aldehyde dehydrogenase 6B2 | chr2:5977727-5981899 REVERSE LENGTH=607
SoyBase E_val: 0 ISS
GO:0006979 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to oxidative stress
SoyBase N/A ISS
GO:0008152 GO-bp
Annotation by Michelle Graham. GO Biological Process: metabolic process
SoyBase N/A ISS
GO:0015996 GO-bp
Annotation by Michelle Graham. GO Biological Process: chlorophyll catabolic process
SoyBase N/A ISS
GO:0055114 GO-bp
Annotation by Michelle Graham. GO Biological Process: oxidation-reduction process
SoyBase N/A ISS
GO:0005737 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm
SoyBase N/A ISS
GO:0005739 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: mitochondrion
SoyBase N/A ISS
GO:0004028 GO-mf
Annotation by Michelle Graham. GO Molecular Function: 3-chloroallyl aldehyde dehydrogenase activity
SoyBase N/A ISS
GO:0004491 GO-mf
Annotation by Michelle Graham. GO Molecular Function: methylmalonate-semialdehyde dehydrogenase (acylating) activity
SoyBase N/A ISS
GO:0005507 GO-mf
Annotation by Michelle Graham. GO Molecular Function: copper ion binding
SoyBase N/A ISS
GO:0016491 GO-mf
Annotation by Michelle Graham. GO Molecular Function: oxidoreductase activity
SoyBase N/A ISS
KOG2450
KOG
Aldehyde dehydrogenase
JGI ISS
PTHR11699 Panther
ALDEHYDE DEHYDROGENASE-RELATED
JGI ISS
PTHR11699:SF27 Panther
gb def: aldehyde dehydrogenase [nostoc sp. pcc 7120]
JGI ISS
PF00171 PFAM
Aldehyde dehydrogenase family
JGI ISS
UniRef100_B9RX74 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Methylmalonate-semialdehyde dehydrogenase, putative n=1 Tax=Ricinus communis RepID=B9RX74_RICCO
SoyBase E_val: 0 ISS
UniRef100_I1KL66 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1KL66_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma07g30210
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Paralogs of Glyma07g30210
Paralog Evidence Comments
Glyma08g07110 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma07g30210 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.07g183600 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma07g30210
Coding sequences of Glyma07g30210
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma07g30210.1 sequence type=CDS gene model=Glyma07g30210 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGTTGCGGCTGTCGATTCAACGAGTGAGGAAGTTGAACTTTCTCAGTCCCCAGATCTCTGCTTTGGGAAGGTCCCATTTGTCAACTGCTGCTGAACCATCTTCCAGTAAGAGCAATCCACCGAGGGTTCCAAATCTTATTGGAGGCAGTTTTGTTGACTCAAAAGCATCAACTGTCATTGATGTTATAAACCCAGCAACCCAAGAAGTTGTTTCACAAGTTCCTTTGTCTACTGATGAAGAGTTTAAGGAAGCTGTATCAGCAGCAAAGAAGGCATTTCCATCATGGCGTAACACTCCAATTACAACACGCCAACGTGTTATGCTGAAGCTTCAAGAGCTTATACGCAGAGATATGGATAAACTTGCTCTGAATGTGACCACTGAACAAGGAAAGACATTGAAGGATGCCCAAGGAGATGTATTTCGTGGTTTAGAGGTGGTGGAACATGCTTGTGGGATGGCAACTCTGCAAATGGGGGAGTATGTTTCCAATGTATCACATGGAATTGATACTTATAGCATTAGAGAACCACTTGGTGTTTGTGCTGGTATTTGTCCTTTCAACTTTCCTGCAATGATTCCCTTGTGGATGTTTCCTATGGCTATTACCTGTGGTAATACCTTTGTTCTAAAACCATCAGAGAAAGACCCAGGTGCTTCTGTAATGCTTGCAGAATTGGCATTGGAGGCTGGTTTGCCTGAGGGTGTCTTAAATATAGTTCATGGAACCCATGATATTGTGAATGCTATTTGTGATGATGACGACATCAAAGCCATATCCTTTGTTGGTTCAAATGTTGCCGGAATGCACATATATTCAAGAGCAGCAGCTAAAGGGAAACGCGTTCAGTCTAACATGGGAGCCAAAAATCATGCGATTGTCATGGCAGATGCAAATGTTGATGCTACTCTTAATGCTTTAGTTGCTGCTGGTTTTGGTGCTGCTGGACAAAGGTGTATGGCTCTCAGTACAGTTGTTTTTGTTGGAGGCTCAAAACCATGGGAGGATAAACTTTTAGAGCATGCCAAAGCTCTTAAAGTAAATGCCGGAACTGAACCTGATACAGATCTTGGTCCGGTGATCAGCAAGCAGGCAAAGGAGAGAATACACAGATTAGTTCAATCTGGGGTTGAAAGTGGTGCCAGACTACTGCTTGATGGAAGAAATATAGTGGTCCCAGGATATGAATCTGGCAATTTTATTGGTCCAACCATCTTATCAGATATCAATGCCAACATGGAGTGCTACAAGGAGGAAATTTTTGGCCCAGTTCTTCTTTTCATGGAGGCTGATAGCTTGGAAGAAGCCATAAACATTATCAACAGTAACAAGTACGGAAATGGTGCTTCTATATTTACTACATCTGGTGTTGCTGCAAGGAAATTTCAGACTGAGATAGAGGCTGGACAGGTTGGCATCAATGTCCCCATTCCAGTTCCTTTGCCCTTCTTCTCATTTACCGGCAACAAGGCATCGTTTGCCGGTGATCTCAACTTCTATGGCAAGGCAGGGGTTAACTTCTATACACAGATTAAGACAATAACACAACAATGGAAGGATTCAACTGGTGGTAGCAAGATTAACTTGGCAATGCCAACCTCTCAAAAATAA
Predicted protein sequences of Glyma07g30210
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma07g30210.1 sequence type=predicted peptide gene model=Glyma07g30210 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MLRLSIQRVRKLNFLSPQISALGRSHLSTAAEPSSSKSNPPRVPNLIGGSFVDSKASTVIDVINPATQEVVSQVPLSTDEEFKEAVSAAKKAFPSWRNTPITTRQRVMLKLQELIRRDMDKLALNVTTEQGKTLKDAQGDVFRGLEVVEHACGMATLQMGEYVSNVSHGIDTYSIREPLGVCAGICPFNFPAMIPLWMFPMAITCGNTFVLKPSEKDPGASVMLAELALEAGLPEGVLNIVHGTHDIVNAICDDDDIKAISFVGSNVAGMHIYSRAAAKGKRVQSNMGAKNHAIVMADANVDATLNALVAAGFGAAGQRCMALSTVVFVGGSKPWEDKLLEHAKALKVNAGTEPDTDLGPVISKQAKERIHRLVQSGVESGARLLLDGRNIVVPGYESGNFIGPTILSDINANMECYKEEIFGPVLLFMEADSLEEAINIINSNKYGNGASIFTTSGVAARKFQTEIEAGQVGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVNFYTQIKTITQQWKDSTGGSKINLAMPTSQK*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
