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Report for Sequence Feature Glyma07g29094

Feature Type:gene_model
Chromosome:Gm07
Start:33609563
stop:33610994
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma07g29094
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G63200AT Annotation by Michelle Graham. TAIR10: tetratricopeptide repeat (TPR)-containing protein | chr5:25349043-25352899 FORWARD LENGTH=649 SoyBaseE_val: 2.00E-26ISS
GO:0000956GO-bp Annotation by Michelle Graham. GO Biological Process: nuclear-transcribed mRNA catabolic process SoyBaseN/AISS
GO:0008150GO-bp Annotation by Michelle Graham. GO Biological Process: biological process SoyBaseN/AISS
GO:0005575GO-cc Annotation by Michelle Graham. GO Cellular Compartment: cellular component SoyBaseN/AISS
PTHR23083Panther O-LINKED N-ACETYLGLUCOSAMINE TRANSFERASE, OGT JGI ISS
PTHR23083:SF146Panther SUBFAMILY NOT NAMED JGI ISS
UniRef100_G8A2H1UniRef Annotation by Michelle Graham. Most informative UniRef hit: UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase 110 kDa subunit n=1 Tax=Medicago truncatula RepID=G8A2H1_MEDTR SoyBaseE_val: 8.00E-40ISS
UniRef100_I1KC84UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1KC84_SOYBN SoyBaseE_val: 7.00E-50ISS

Expression Patterns of Glyma07g29094
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma07g29094 not represented in the dataset
Glyma07g29094 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma07g29094 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments

References for Glyma07g29094
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma07g29094
>Glyma07g29094.1   sequence type=CDS   gene model=Glyma07g29094   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTTGCTTTCTTTAGTTCAGATTCACCAAGCACAATGCCTGATACTAGAAAGTTCATCCGAAAATAGTTCAGATAAAGAACTTGAACCTCATGAACTTGAAGAGATTCTTTCTAAGCTGAAAGAGTTAGTGAAGTCAGATATCAGACAGATAGCTGTATGGAACACACTGGGTTTTATCCTTTTTAAAATTGGTCGTGTGAAGAGTGTTGTCTCAGTTTTGTCATCATTGTTGTCCATTGCACCAGAGAACTATGATTGCATAGGAAATCTTGGGATAGCTTATCTTCAAATGTAA
Predicted protein sequences of Glyma07g29094
>Glyma07g29094.1   sequence type=predicted peptide   gene model=Glyma07g29094   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MLLSLVQIHQAQCLILESSSENSSDKELEPHELEEILSKLKELVKSDIRQIAVWNTLGFILFKIGRVKSVVSVLSSLLSIAPENYDCIGNLGIAYLQM*






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