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Report for Sequence Feature Glyma07g28981

Feature Type:gene_model
Chromosome:Gm07
Start:33366040
stop:33367122
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G08410AT Annotation by Michelle Graham. TAIR10: P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:2646307-2649106 FORWARD LENGTH=589 SoyBaseE_val: 4.00E-54ISS
GO:0008150GO-bp Annotation by Michelle Graham. GO Biological Process: biological process SoyBaseN/AISS
GO:0005525GO-mf Annotation by Michelle Graham. GO Molecular Function: GTP binding SoyBaseN/AISS
PTHR11089Panther GTP-BINDING PROTEIN-RELATED JGI ISS
PTHR11089:SF7Panther PUTATIVE NUCLEOTIDE BINDING PROTEIN JGI ISS
UniRef100_G7JES9UniRef Annotation by Michelle Graham. Most informative UniRef hit: Large subunit GTPase-like protein n=1 Tax=Medicago truncatula RepID=G7JES9_MEDTR SoyBaseE_val: 1.00E-54ISS
UniRef100_I1LRL9UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1LRL9_SOYBN SoyBaseE_val: 4.00E-100ISS

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma07g28981 not represented in the dataset

Glyma07g28981 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection
Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Corresponding NameAnnotation VersionEvidenceComments
Glyma.07g176900 Wm82.a2.v1IGC As supplied by JGI

Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

>Glyma07g28981.1   sequence type=CDS   gene model=Glyma07g28981   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGGGAAGAAGCAGAACGAGATCCAGAAAATAGGGCTAGGCCGAGCCCAGGTGAAGCAGCACAACCAGATGATCCAACAGGGCAAGGACAAGTCTCGCTTCTACAGGAAGAAGTTCCTTGAATCCTTCACCGAAGTCTTCGACATCAACGTTGTCGTCAAGCAATCCCTAGAACCCCTCCCCGAACTCGCCCCTGCCATTTCAACCACTCTCATCAGCCTTGAACCAAGTTCCGTGCCCGATGAAACGACGACATCGGAAGAAGTGAGGAAGCAGCAAAAGCAAGAGGAGGCGCTCCACACCAGCAGCCTCCGCGTTCCTTGCCGCCCGCCGTGGACTCCCGACATGTCCGCGGATGAGCTGAACACCAGCAAAACGCAAGCTTTCTTGACCTGGCGCCGCAGCTTGGTGAGGCTTGAGGAGAATAAGAAGCTTGTTCTTACTCCGTTTGAGAAGAATCTTGACATCTGGAGACAGCTCTGGCGGGTTGTTGAGCGCAGTGATCTGTTATGTTGGTATCATCTTTGA

>Glyma07g28981.1   sequence type=predicted peptide   gene model=Glyma07g28981   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MGKKQNEIQKIGLGRAQVKQHNQMIQQGKDKSRFYRKKFLESFTEVFDINVVVKQSLEPLPELAPAISTTLISLEPSSVPDETTTSEEVRKQQKQEEALHTSSLRVPCRPPWTPDMSADELNTSKTQAFLTWRRSLVRLEENKKLVLTPFEKNLDIWRQLWRVVERSDLLCWYHL*







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