Glyma07g27134 - SoyBase

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Report for Sequence Feature Glyma07g27134

Feature Type:	gene_model
Chromosome:	Gm07
Start:	30102131
stop:	30106486
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma07g27134

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT3G10410	AT	Annotation by Michelle Graham. TAIR10: SERINE CARBOXYPEPTIDASE-LIKE 49 \| chr3:3235518-3238063 REVERSE LENGTH=516	SoyBase	E_val: 6.00E-48	ISS
GO:0006508	GO-bp	Annotation by Michelle Graham. GO Biological Process: proteolysis	SoyBase	N/A	ISS
GO:0005576	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: extracellular region	SoyBase	N/A	ISS
GO:0005773	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: vacuole	SoyBase	N/A	ISS
GO:0005829	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: cytosol	SoyBase	N/A	ISS
GO:0004185	GO-mf	Annotation by Michelle Graham. GO Molecular Function: serine-type carboxypeptidase activity	SoyBase	N/A	ISS
PTHR11802	Panther	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	JGI		ISS
PF00450	PFAM	Serine carboxypeptidase	JGI		ISS
UniRef100_B9SCI8	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Serine carboxypeptidase, putative n=1 Tax=Ricinus communis RepID=B9SCI8_RICCO	SoyBase	E_val: 3.00E-53	ISS
UniRef100_I1LTM8	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1LTM8_SOYBN	SoyBase	E_val: 7.00E-80	ISS

Expression Patterns of Glyma07g27134

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma07g27134 not represented in the dataset	Glyma07g27134 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma07g27134 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.07g172400	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma07g27134

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma07g27134

Limit To All Plant Sequences

>Glyma07g27134.1   sequence type=CDS   gene model=Glyma07g27134   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTTCTACTTCTTCTTTGAATCTCAAAGCAGTAAGAATGATTGTGTTGTCATATCGCTGACTAGAGGACCAAGATGCAGCAATGAACTAGGTTTGTTTTGTTCAAATGGTCCTTTTCAGCTTACCAAGAACTTGTCTCTTGAGTGGAATGACTATGGCTGGGACAAGCATCCTAGTTCCAACCCCAACCCAGATTCATATGCTGGACACTACAGTCTAGCTCTTGCATCTAGGGTTCACCAAGGAAACAAAACAAAAGAAGGAATTCATATATATAAATCTAAAGACAGGGGACTAGTTAAAAAGGCTAATTATGACAGCATCAACAAGTTGATCCCACCATGCAAGCAGGCCATAGAAGCTTACGGCACTGAAGTTGAAGAAACATGCGTATCTTCGTTATATGCTTGCAATAAGATATTCAATTGGATCATGACCATCGCTTACGATGTAAATTACTATGACATTAGAAAGAAATGTGTGGGAGATTTGTGTTATAACTTCTTTGTCATGGAGGATTTCTTAAATAAGAAATTATAG

Predicted protein sequences of Glyma07g27134

Limit To All Plant Sequences

>Glyma07g27134.1   sequence type=predicted peptide   gene model=Glyma07g27134   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MFYFFFESQSSKNDCVVISLTRGPRCSNELGLFCSNGPFQLTKNLSLEWNDYGWDKHPSSNPNPDSYAGHYSLALASRVHQGNKTKEGIHIYKSKDRGLVKKANYDSINKLIPPCKQAIEAYGTEVEETCVSSLYACNKIFNWIMTIAYDVNYYDIRKKCVGDLCYNFFVMEDFLNKKL*

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