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Report for Sequence Feature Glyma07g26528

Feature Type:gene_model
Chromosome:Gm07
Start:29372203
stop:29373602
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma07g26528
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G42560AT Annotation by Michelle Graham. TAIR10: Abscisic acid-responsive (TB2/DP1, HVA22) family protein | chr5:17015573-17016969 FORWARD LENGTH=296 SoyBaseE_val: 2.00E-29ISS
GO:0007165GO-bp Annotation by Michelle Graham. GO Biological Process: signal transduction SoyBaseN/AISS
GO:0008150GO-bp Annotation by Michelle Graham. GO Biological Process: biological process SoyBaseN/AISS
GO:0009755GO-bp Annotation by Michelle Graham. GO Biological Process: hormone-mediated signaling pathway SoyBaseN/AISS
GO:0005634GO-cc Annotation by Michelle Graham. GO Cellular Compartment: nucleus SoyBaseN/AISS
GO:0003674GO-mf Annotation by Michelle Graham. GO Molecular Function: molecular function SoyBaseN/AISS
PTHR12300Panther HVA22-LIKE PROTEINS JGI ISS
PTHR12300:SF20Panther HVA22-LIKE PROTEIN JGI ISS
PF03134PFAM TB2/DP1, HVA22 family JGI ISS
UniRef100_G7J4Q8UniRef Annotation by Michelle Graham. Most informative UniRef hit: HVA22-like protein i n=1 Tax=Medicago truncatula RepID=G7J4Q8_MEDTR SoyBaseE_val: 7.00E-28ISS
UniRef100_UPI0002337BD8UniRef Annotation by Michelle Graham. Best UniRef hit: UPI0002337BD8 related cluster n=1 Tax=unknown RepID=UPI0002337BD8 SoyBaseE_val: 1.00E-37ISS

Expression Patterns of Glyma07g26528
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma07g26528 not represented in the dataset
Glyma07g26528 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma07g26528 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.07g170600 Wm82.a2.v1IGC As supplied by JGI

References for Glyma07g26528
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma07g26528
>Glyma07g26528.1   sequence type=CDS   gene model=Glyma07g26528   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTACAGTGAAGCTAAGTTGGAATTTTTCATATTTTTGTGGTACCCTAAAACTAAGGGAACAACATATGTGTATGACTCCTTCTTCAGACTATATGTTGCAAAACATGCGACAGAAATTGATCGCAACTTATTGGAACTAAGGACAAGGGCAGGGGATATTGCAGTTTTGTATTGGCAAAGATTGTCATTTGATACGTTTTCCTCTCCGATGATTGAAAAAGATCCAAATGATGCAAGTGAAGGGGCAGAGGATCAATGGAATGTTCAATTGTGA
Predicted protein sequences of Glyma07g26528
>Glyma07g26528.1   sequence type=predicted peptide   gene model=Glyma07g26528   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MYSEAKLEFFIFLWYPKTKGTTYVYDSFFRLYVAKHATEIDRNLLELRTRAGDIAVLYWQRLSFDTFSSPMIEKDPNDASEGAEDQWNVQL*






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