SoyBase
SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
|
A newer version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT4G29210 | AT | Annotation by Michelle Graham. TAIR10: gamma-glutamyl transpeptidase 4 | chr4:14400990-14403319 FORWARD LENGTH=637 | SoyBase | E_val: 0 | ISS |
| GO:0006751 | GO-bp | Annotation by Michelle Graham. GO Biological Process: glutathione catabolic process | SoyBase | N/A | ISS |
| GO:0006805 | GO-bp | Annotation by Michelle Graham. GO Biological Process: xenobiotic metabolic process | SoyBase | N/A | ISS |
| GO:0005773 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: vacuole | SoyBase | N/A | ISS |
| GO:0003840 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: gamma-glutamyltransferase activity | SoyBase | N/A | ISS |
| GO:0016756 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: glutathione gamma-glutamylcysteinyltransferase activity | SoyBase | N/A | ISS |
| KOG2410 | KOG | Gamma-glutamyltransferase | JGI | ISS | |
| PTHR11686 | Panther | GAMMA GLUTAMYL TRANSPEPTIDASES | JGI | ISS | |
| PF01019 | PFAM | Gamma-glutamyltranspeptidase | JGI | ISS | |
| UniRef100_G7KHZ7 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Gamma-glutamyltranspeptidase n=1 Tax=Medicago truncatula RepID=G7KHZ7_MEDTR | SoyBase | E_val: 0 | ISS |
| UniRef100_I1KJR9 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1KJR9_SOYBN | SoyBase | E_val: 0 | ISS |
|
Glyma07g15150 not represented in the dataset |
Glyma07g15150 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
| Paralog | Evidence | Comments |
|---|---|---|
| Glyma01g00850 | IGC | Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3. |
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|---|---|---|
| Glyma.07g126200 | Wm82.a2.v1 | IGC | As supplied by JGI |
| Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma07g15150.2 sequence type=transcript gene model=Glyma07g15150 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high CCTGAACCTCGATATTTTATTCAGAAAATATCCTGACCACCGATAACTTCTTCGGGTAGTTGAGCTCATCATTCATCATACTATAAATTTTTATTATCCGAAAATATCTTTTAGATCTAACACAAGATAACACAACACCACGTGAAATCTATGCGTTAAGAAAAGGCACAAGTTGAGAATGAGAACAATAGTATAATATTATAAGGGTGTGCTTCCTAATCCAATCCAATTCATCAGTGAGGCACCCAGCTCATTTAAGGTGCTTCAACAGCATCATCTGCATCAATATCATCGTCCTTAATTGTGGAGACACAACATCATGGATTCTCCTTTGTTGTCACAAGACCATGTTTTGCCCAACAAACACACATGGAAGATGAGCCTTTGTGCTATCGTGGCTATCACAATTGTTGGACTAGTAGTCAGAGGCAACACTAGCTATGGAATACTGTCCGGAGCAGAAAAATATAATGATGGAATCGCAACCAATCAGGGAGATATTGTTGAATCAGATGTGGGAGTTGTTGCAACCGATGATGCTCGGTGTTCTGCAATTGGTGTTTCAATGCTTAGGCAGGGTGGACATGCTGTTGATGCTGCAGTGGCAGCAGCATTATGCATTGGTGTTGTTTTCTCGGCATCAAGTGGTATAGGAGGTGGCGCTTTCATGGTTGTTCGATCTTCTTCATCCTCTCAAACTCAAGCTTTTGACATGAGAGAAACTGCTCCTTTAGCTGCTTCACAGAATATGTATCAGAACAATCCCAAAGGTAAGACCTTAGGTCCATTGTCAATGGGAGTACCTGGTGAATTAGCTGGCCTTCATGCAGCCTGGTTGAAGCATGGACGATTGCCATGGAAAACCTTATTCCAACCAGCTATAGAACTTGCTGGAAAGGGTTTTGTTGTTACTCCTACTCTTGGAGAGTACATGGCTGCTGATGCAAATAAGATATTGGATGATCCTGGGTTAAGAAAACTATATGCACCCAATGGAACTTTGTTGAAAGCTGGGGATGTGTGTAGAAATGTTGAACTTGGTAGCACCTTGGAGGTAGTGGCTGAGCAAGGGCCACAAGCTTTCTACAATGGAACCATTGGTGAAAATTTAGTCAAGGATGTCAGAGATGCTGGTGGGATTTTAACAATGGAGGATTTACACAATTACAAGTTGGAAGTAACAGATGCAACGACTGTGAATGTGATGGGATACACCATATATGGAATGCCACCTCCTTCATCTGGAACACTTGCTCTTTCTCTGGTTCTGAACATCTTGGGCAGTTATGGAGGTTCTAATGCTGCAAGGGGAAATCTTGGTCTACATCGACTAATAGAAGCTCTGAAACACATGTGGGCTGTTCGAATGAACTTGGGTGACCCCAACTTTGTAAACATTGATGATACTATATCCAAAATGCTTTCCCCATCTTTTGCAAAAGATATTCAGCACATGATACTTGATAACACTACTTTCCCTCCAGAGTACTATATGAACAGGTGGAGTCAACTTAGCGATCACGGGACAAGCCATATGTGCATTGTCGATGCTGATAGAAATGCTGTATCACTAACAACAACTGTTAACTATCATTTTGGAGCCGGGTTTCGTTCTACTTCTACTGGTATCTTGGTCAACAATGAGATGGATGACTTCTCTACTCCCACTGATATATCCCCGGATAAACTACCTCCCGCTCCAGCAAATTTTATTGAACCAAACAAAAGACCATTGTCTTCCATGACTCCTCTTATTGTCACAAAGGATGATCAGTTGGTTGGGGTACTTGGAGGGAGCGGTGGAATGAACATTATTGCAGCTGTAGTTCAAGTCTTTCTTAATCATTTCATCTTGGGAATGAAACCCTTGGATGCAGTTGTGAGCCCAAGGATCTATCACAAGGTTATAGCTAACCTTTTTTCAGATAATTCCTTGATGTGTGATGCTCCAAACCACAATCTAATTTTGATTTGTATCTCACGCAGCTAATACCAAATGTAGTTCGTTATGAGAACTTGACTGCTCATAATGGCGATCACATTGAGCTTTCAAAAGAAAGTAGGCTTTTCCTAGAAGAGAGAGGTCATCAACTGAGAGGTTCTGAAGCACTAGCTGTGACTCAGCTTATTGTGCAAACTCTTAAAACGCCTATGAACTTCAATAGGAAAGTTGGTGAAAACACCAAATCACTTACAAAGCATGGCACTCTAACAGCAGTAAGTGACCCTAGAAAGGGTGGATGTCCAGCTGCTGTTTAATTATATTGATCAATTCAGGTTCAAAATTGTTAAAAAACACAGACATTTCAAAACAATTTTCAATTTTTTAGCCATGTTGTATCAACACCATCCAGGACAAAAAAAAAAAGAAAACGATTTGGTCATCATTCTTCAAACAATTAAAAACCCGATGAAACTTTGTTTCTGATACCGCAGTTACGCACTTAGAAGACAAGGTGAACTGTTTTTTGCGAGAATAATAAGCCATTGGTTAGTTATTGTGGGATAAAATAGTTTGAACGAGGCATGAAGCTTATGAATTAAGTAAAGGTTCATATAGTGAGAGAATTGGTGCCCTTGGGGCATTGTGAGATGGAAACACTCCTATAGTGTGTGTTCTAATTTGTAATAGAGAGGTTCTTCCCCACTCTTTGAGAATGATACAAGTTCCTATAAAAGAAACAATCAAATTTAGAGTATTAAATGCCAAAGAAAGAGTATTACAAGAGTATTAAAAGTTTATTCCAAACATAGATATCATGTCCTGACTGCATACCATTTTCATGCTCAGTGCTTACTCGAAGTAGTGGCAGACTTGCAGGAAGGCCAGAGTTTTTTTGTAAAACTGTTCAATATAGTATTGATATCACTCCGGATCTGAAGCCATTTTTTTCCTTTCTTTCTCCCGTTTTCCTTTAAACGAAATCGCTTAGTAAAGAATGACTGGAATAGGACGACCACTCTGTACAGTTCGGATTTTGTTTAGATCCCATTTTCGTTTGAAGGAAATTGCAGCTTCTTCTGTTTCGTTTGAAGGAAATTGCAGCTTCTTCTGTAGGTTAATGCATAAGAAAGCATGGTCAACAAAACTTGCCATCAACTGATCTAATGTCACTAATTAAAGCCTATTGATATCAATAAATTAACCAAACACACATTACATCTGTAGCAGTATTACGTGTTCAGATGAAAACCCATGAATGGTTTTATATTACATCTCTAGCATGTCCTCTCATGCAATTTGCTCTGAAATTCAACTTTTATTAATGGAGGAAAGATTGTACACTACACTACACCCTTTGGTCATAAAGGCTCCAAAATTATGCATGAATTGAACCAACTATTTCCAAAAACTTTAGATGAAAACATACAAATGGTTTTATATAACATCTTTAAAAATTAGGACCATGCTACAGCCCGG
>Glyma07g15150.1 sequence type=CDS gene model=Glyma07g15150 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGATTCTCCTTTGTTGTCACAAGACCATGTTTTGCCCAACAAACACACATGGAAGATGAGCCTTTGTGCTATCGTGGCTATCACAATTGTTGGACTAGTAGTCAGAGGCAACACTAGCTATGGAATACTGTCCGGAGCAGAAAAATATAATGATGGAATCGCAACCAATCAGGGAGATATTGTTGAATCAGATGTGGGAGTTGTTGCAACCGATGATGCTCGGTGTTCTGCAATTGGTGTTTCAATGCTTAGGCAGGGTGGACATGCTGTTGATGCTGCAGTGGCAGCAGCATTATGCATTGGTGTTGTTTTCTCGGCATCAAGTGGTATAGGAGGTGGCGCTTTCATGGTTGTTCGATCTTCTTCATCCTCTCAAACTCAAGCTTTTGACATGAGAGAAACTGCTCCTTTAGCTGCTTCACAGAATATGTATCAGAACAATCCCAAAGGTAAGACCTTAGGTCCATTGTCAATGGGAGTACCTGGTGAATTAGCTGGCCTTCATGCAGCCTGGTTGAAGCATGGACGATTGCCATGGAAAACCTTATTCCAACCAGCTATAGAACTTGCTGGAAAGGGTTTTGTTGTTACTCCTACTCTTGGAGAGTACATGGCTGCTGATGCAAATAAGATATTGGATGATCCTGGGTTAAGAAAACTATATGCACCCAATGGAACTTTGTTGAAAGCTGGGGATGTGTGTAGAAATGTTGAACTTGGTAGCACCTTGGAGGTAGTGGCTGAGCAAGGGCCACAAGCTTTCTACAATGGAACCATTGGTGAAAATTTAGTCAAGGATGTCAGAGATGCTGGTGGGATTTTAACAATGGAGGATTTACACAATTACAAGTTGGAAGTAACAGATGCAACGACTGTGAATGTGATGGGATACACCATATATGGAATGCCACCTCCTTCATCTGGAACACTTGCTCTTTCTCTGGTTCTGAACATCTTGGGCAGTTATGGAGGTTCTAATGCTGCAAGGGGAAATCTTGGTCTACATCGACTAATAGAAGCTCTGAAACACATGTGGGCTGTTCGAATGAACTTGGGTGACCCCAACTTTGTAAACATTGATGATACTATATCCAAAATGCTTTCCCCATCTTTTGCAAAAGATATTCAGCACATGATACTTGATAACACTACTTTCCCTCCAGAGTACTATATGAACAGGTGGAGTCAACTTAGCGATCACGGGACAAGCCATATGTGCATTGTCGATGCTGATAGAAATGCTGTATCACTAACAACAACTGTTAACTATCATTTTGGAGCCGGGTTTCGTTCTACTTCTACTGGTATCTTGGTCAACAATGAGATGGATGACTTCTCTACTCCCACTGATATATCCCCGGATAAACTACCTCCCGCTCCAGCAAATTTTATTGAACCAAACAAAAGACCATTGTCTTCCATGACTCCTCTTATTGTCACAAAGGATGATCAGTTGGTTGGGGTACTTGGAGGGAGCGGTGGAATGAACATTATTGCAGCTGTAGTTCAAGTCTTTCTTAATCATTTCATCTTGGGAATGAAACCCTTGGATGCAGTTGTGAGCCCAAGGATCTATCACAAGCTAATACCAAATGTAGTTCGTTATGAGAACTTGACTGCTCATAATGGCGATCACATTGAGCTTTCAAAAGAAAGTAGGCTTTTCCTAGAAGAGAGAGGTCATCAACTGAGAGGTTCTGAAGCACTAGCTGTGACTCAGCTTATTGTGCAAACTCTTAAAACGCCTATGAACTTCAATAGGAAAGTTGGTGAAAACACCAAATCACTTACAAAGCATGGCACTCTAACAGCAGTAAGTGACCCTAGAAAGGGTGGATGTCCAGCTGCTGTTTAA >Glyma07g15150.2 sequence type=CDS gene model=Glyma07g15150 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGATTCTCCTTTGTTGTCACAAGACCATGTTTTGCCCAACAAACACACATGGAAGATGAGCCTTTGTGCTATCGTGGCTATCACAATTGTTGGACTAGTAGTCAGAGGCAACACTAGCTATGGAATACTGTCCGGAGCAGAAAAATATAATGATGGAATCGCAACCAATCAGGGAGATATTGTTGAATCAGATGTGGGAGTTGTTGCAACCGATGATGCTCGGTGTTCTGCAATTGGTGTTTCAATGCTTAGGCAGGGTGGACATGCTGTTGATGCTGCAGTGGCAGCAGCATTATGCATTGGTGTTGTTTTCTCGGCATCAAGTGGTATAGGAGGTGGCGCTTTCATGGTTGTTCGATCTTCTTCATCCTCTCAAACTCAAGCTTTTGACATGAGAGAAACTGCTCCTTTAGCTGCTTCACAGAATATGTATCAGAACAATCCCAAAGGTAAGACCTTAGGTCCATTGTCAATGGGAGTACCTGGTGAATTAGCTGGCCTTCATGCAGCCTGGTTGAAGCATGGACGATTGCCATGGAAAACCTTATTCCAACCAGCTATAGAACTTGCTGGAAAGGGTTTTGTTGTTACTCCTACTCTTGGAGAGTACATGGCTGCTGATGCAAATAAGATATTGGATGATCCTGGGTTAAGAAAACTATATGCACCCAATGGAACTTTGTTGAAAGCTGGGGATGTGTGTAGAAATGTTGAACTTGGTAGCACCTTGGAGGTAGTGGCTGAGCAAGGGCCACAAGCTTTCTACAATGGAACCATTGGTGAAAATTTAGTCAAGGATGTCAGAGATGCTGGTGGGATTTTAACAATGGAGGATTTACACAATTACAAGTTGGAAGTAACAGATGCAACGACTGTGAATGTGATGGGATACACCATATATGGAATGCCACCTCCTTCATCTGGAACACTTGCTCTTTCTCTGGTTCTGAACATCTTGGGCAGTTATGGAGGTTCTAATGCTGCAAGGGGAAATCTTGGTCTACATCGACTAATAGAAGCTCTGAAACACATGTGGGCTGTTCGAATGAACTTGGGTGACCCCAACTTTGTAAACATTGATGATACTATATCCAAAATGCTTTCCCCATCTTTTGCAAAAGATATTCAGCACATGATACTTGATAACACTACTTTCCCTCCAGAGTACTATATGAACAGGTGGAGTCAACTTAGCGATCACGGGACAAGCCATATGTGCATTGTCGATGCTGATAGAAATGCTGTATCACTAACAACAACTGTTAACTATCATTTTGGAGCCGGGTTTCGTTCTACTTCTACTGGTATCTTGGTCAACAATGAGATGGATGACTTCTCTACTCCCACTGATATATCCCCGGATAAACTACCTCCCGCTCCAGCAAATTTTATTGAACCAAACAAAAGACCATTGTCTTCCATGACTCCTCTTATTGTCACAAAGGATGATCAGTTGGTTGGGGTACTTGGAGGGAGCGGTGGAATGAACATTATTGCAGCTGTAGTTCAAGTCTTTCTTAATCATTTCATCTTGGGAATGAAACCCTTGGATGCAGTTGTGAGCCCAAGGATCTATCACAAGGTTATAGCTAACCTTTTTTCAGATAATTCCTTGATGTGTGATGCTCCAAACCACAATCTAATTTTGATTTGTATCTCACGCAGCTAA
>Glyma07g15150.1 sequence type=predicted peptide gene model=Glyma07g15150 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MDSPLLSQDHVLPNKHTWKMSLCAIVAITIVGLVVRGNTSYGILSGAEKYNDGIATNQGDIVESDVGVVATDDARCSAIGVSMLRQGGHAVDAAVAAALCIGVVFSASSGIGGGAFMVVRSSSSSQTQAFDMRETAPLAASQNMYQNNPKGKTLGPLSMGVPGELAGLHAAWLKHGRLPWKTLFQPAIELAGKGFVVTPTLGEYMAADANKILDDPGLRKLYAPNGTLLKAGDVCRNVELGSTLEVVAEQGPQAFYNGTIGENLVKDVRDAGGILTMEDLHNYKLEVTDATTVNVMGYTIYGMPPPSSGTLALSLVLNILGSYGGSNAARGNLGLHRLIEALKHMWAVRMNLGDPNFVNIDDTISKMLSPSFAKDIQHMILDNTTFPPEYYMNRWSQLSDHGTSHMCIVDADRNAVSLTTTVNYHFGAGFRSTSTGILVNNEMDDFSTPTDISPDKLPPAPANFIEPNKRPLSSMTPLIVTKDDQLVGVLGGSGGMNIIAAVVQVFLNHFILGMKPLDAVVSPRIYHKLIPNVVRYENLTAHNGDHIELSKESRLFLEERGHQLRGSEALAVTQLIVQTLKTPMNFNRKVGENTKSLTKHGTLTAVSDPRKGGCPAAV* >Glyma07g15150.2 sequence type=predicted peptide gene model=Glyma07g15150 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MDSPLLSQDHVLPNKHTWKMSLCAIVAITIVGLVVRGNTSYGILSGAEKYNDGIATNQGDIVESDVGVVATDDARCSAIGVSMLRQGGHAVDAAVAAALCIGVVFSASSGIGGGAFMVVRSSSSSQTQAFDMRETAPLAASQNMYQNNPKGKTLGPLSMGVPGELAGLHAAWLKHGRLPWKTLFQPAIELAGKGFVVTPTLGEYMAADANKILDDPGLRKLYAPNGTLLKAGDVCRNVELGSTLEVVAEQGPQAFYNGTIGENLVKDVRDAGGILTMEDLHNYKLEVTDATTVNVMGYTIYGMPPPSSGTLALSLVLNILGSYGGSNAARGNLGLHRLIEALKHMWAVRMNLGDPNFVNIDDTISKMLSPSFAKDIQHMILDNTTFPPEYYMNRWSQLSDHGTSHMCIVDADRNAVSLTTTVNYHFGAGFRSTSTGILVNNEMDDFSTPTDISPDKLPPAPANFIEPNKRPLSSMTPLIVTKDDQLVGVLGGSGGMNIIAAVVQVFLNHFILGMKPLDAVVSPRIYHKVIANLFSDNSLMCDAPNHNLILICISRS*
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||
|
|
|
