Report for Sequence Feature Glyma07g13611
Feature Type: gene_model
Chromosome: Gm07
Start: 12609537
stop: 12618154
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma07g13611
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT2G44745 AT
Annotation by Michelle Graham. TAIR10: WRKY family transcription factor | chr2:18447482-18449004 REVERSE LENGTH=218
SoyBase E_val: 1.00E-72 ISS
GO:0006355 GO-bp
Annotation by Michelle Graham. GO Biological Process: regulation of transcription, DNA-dependent
SoyBase N/A ISS
GO:0009718 GO-bp
Annotation by Michelle Graham. GO Biological Process: anthocyanin-containing compound biosynthetic process
SoyBase N/A ISS
GO:0005634 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: nucleus
SoyBase N/A ISS
GO:0003700 GO-mf
Annotation by Michelle Graham. GO Molecular Function: sequence-specific DNA binding transcription factor activity
SoyBase N/A ISS
GO:0043565 GO-mf
Annotation by Michelle Graham. GO Molecular Function: sequence-specific DNA binding
SoyBase N/A ISS
PF03106 PFAM
WRKY DNA -binding domain
JGI ISS
UniRef100_F8RKQ9 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: STP n=1 Tax=Medicago truncatula RepID=F8RKQ9_MEDTR
SoyBase E_val: 3.00E-123 ISS
UniRef100_UPI0002338943 UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI0002338943 related cluster n=1 Tax=unknown RepID=UPI0002338943
SoyBase E_val: 3.00E-177 ISS
Proteins Associated with Glyma07g13611
Locus Gene Symbol Protein Name
WRKY107 WRKY Transcription Factor
Expression Patterns of Glyma07g13611
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Gene model name correspondences to Glyma07g13611 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.07g116300 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma07g13611
Coding sequences of Glyma07g13611
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma07g13611.1 sequence type=CDS gene model=Glyma07g13611 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGAAGGAGAGAGAGGTGTCAGTCCCAATTTTGAGCTCCAAGTTTCATTCACAAACACCCCTCAAGCGATCCATGAAATGGGTTTTGTTCAATTTGAAGAAAACCAGGTTCTTAGTTTCTTGGCACCCTCTGCTCAATCCCAATCTTGTCAGCTCTCTCAATCTCTAAACGCCGGCAGCAGCGGTAGCAATACTGCTGTGGCCGCTACCACCACATTCACCGTCACTGCCACCACCTCCGGATCCGGAGCAACAATTGGTTTCAGCCATAATGACCTTGTCTCCAGAACTTCTTGGAATAATAATGAACAGGTGCGAACACTGGATCCCAAAGCTGTCAATGACGAAAATTGCACCGGAAATACTAGTGATGGTGGCAACAACACATGGTGGAGAAGTGCAGGCTCAGAGAAGAACAAGATGAAAGTGAGGAGGAAGCTGAGAGAGCCACGGTTTTGTTTCCAAACAAGAAGTGATGTAGATGTGCTTGATGATGGTTACAAATGGAGGAAGTATGGTCAGAAAGTTGTGAAGAATAGCCTTCACCCAAGAAGTTACTACCGCTGTACCCATAACAACTGTAGGGTGAAGAAAAGAGTTGAACGACTATCTGAAGATTGTCGTATGGTAATAACTACCTACGAAGGCAGACACAACCACTCTCCTTGTGATGACTCAAATTCATCGGAACATGAATGTTTCACCTCTTTTTGA
Predicted protein sequences of Glyma07g13611
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma07g13611.1 sequence type=predicted peptide gene model=Glyma07g13611 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MEGERGVSPNFELQVSFTNTPQAIHEMGFVQFEENQVLSFLAPSAQSQSCQLSQSLNAGSSGSNTAVAATTTFTVTATTSGSGATIGFSHNDLVSRTSWNNNEQVRTLDPKAVNDENCTGNTSDGGNNTWWRSAGSEKNKMKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHECFTSF*