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Report for Sequence Feature Glyma07g13020

Feature Type:gene_model
Chromosome:Gm07
Start:11497398
stop:11498205
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G55230AT Annotation by Michelle Graham. TAIR10: microtubule-associated proteins 65-1 | chr5:22402716-22405182 FORWARD LENGTH=587 SoyBaseE_val: 1.00E-15ISS
GO:0000272GO-bp Annotation by Michelle Graham. GO Biological Process: polysaccharide catabolic process SoyBaseN/AISS
GO:0000910GO-bp Annotation by Michelle Graham. GO Biological Process: cytokinesis SoyBaseN/AISS
GO:0001578GO-bp Annotation by Michelle Graham. GO Biological Process: microtubule bundle formation SoyBaseN/AISS
GO:0005982GO-bp Annotation by Michelle Graham. GO Biological Process: starch metabolic process SoyBaseN/AISS
GO:0007020GO-bp Annotation by Michelle Graham. GO Biological Process: microtubule nucleation SoyBaseN/AISS
GO:0008283GO-bp Annotation by Michelle Graham. GO Biological Process: cell proliferation SoyBaseN/AISS
GO:0009664GO-bp Annotation by Michelle Graham. GO Biological Process: plant-type cell wall organization SoyBaseN/AISS
GO:0019344GO-bp Annotation by Michelle Graham. GO Biological Process: cysteine biosynthetic process SoyBaseN/AISS
GO:0030244GO-bp Annotation by Michelle Graham. GO Biological Process: cellulose biosynthetic process SoyBaseN/AISS
GO:0031116GO-bp Annotation by Michelle Graham. GO Biological Process: positive regulation of microtubule polymerization SoyBaseN/AISS
GO:0043622GO-bp Annotation by Michelle Graham. GO Biological Process: cortical microtubule organization SoyBaseN/AISS
GO:0046785GO-bp Annotation by Michelle Graham. GO Biological Process: microtubule polymerization SoyBaseN/AISS
GO:0048193GO-bp Annotation by Michelle Graham. GO Biological Process: Golgi vesicle transport SoyBaseN/AISS
GO:0048528GO-bp Annotation by Michelle Graham. GO Biological Process: post-embryonic root development SoyBaseN/AISS
GO:0051302GO-bp Annotation by Michelle Graham. GO Biological Process: regulation of cell division SoyBaseN/AISS
GO:0051322GO-bp Annotation by Michelle Graham. GO Biological Process: anaphase SoyBaseN/AISS
GO:0005634GO-cc Annotation by Michelle Graham. GO Cellular Compartment: nucleus SoyBaseN/AISS
GO:0005737GO-cc Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm SoyBaseN/AISS
GO:0005819GO-cc Annotation by Michelle Graham. GO Cellular Compartment: spindle SoyBaseN/AISS
GO:0005829GO-cc Annotation by Michelle Graham. GO Cellular Compartment: cytosol SoyBaseN/AISS
GO:0005874GO-cc Annotation by Michelle Graham. GO Cellular Compartment: microtubule SoyBaseN/AISS
GO:0009524GO-cc Annotation by Michelle Graham. GO Cellular Compartment: phragmoplast SoyBaseN/AISS
GO:0009574GO-cc Annotation by Michelle Graham. GO Cellular Compartment: preprophase band SoyBaseN/AISS
GO:0010005GO-cc Annotation by Michelle Graham. GO Cellular Compartment: cortical microtubule, transverse to long axis SoyBaseN/AISS
GO:0055028GO-cc Annotation by Michelle Graham. GO Cellular Compartment: cortical microtubule SoyBaseN/AISS
GO:0005515GO-mf Annotation by Michelle Graham. GO Molecular Function: protein binding SoyBaseN/AISS
GO:0008017GO-mf Annotation by Michelle Graham. GO Molecular Function: microtubule binding SoyBaseN/AISS
GO:0046983GO-mf Annotation by Michelle Graham. GO Molecular Function: protein dimerization activity SoyBaseN/AISS
UniRef100_B9SYY2UniRef Annotation by Michelle Graham. Most informative UniRef hit: Protein regulator of cytokinesis, putative n=1 Tax=Ricinus communis RepID=B9SYY2_RICCO SoyBaseE_val: 4.00E-15ISS
UniRef100_I1M6L8UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Glycine max RepID=I1M6L8_SOYBN SoyBaseE_val: 5.00E-17ISS

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma07g13020 not represented in the dataset

Glyma07g13020 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection
Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Corresponding NameAnnotation VersionEvidenceComments
Glyma.07g120100 Wm82.a2.v1IGC As supplied by JGI

Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

>Glyma07g13020.1   sequence type=CDS   gene model=Glyma07g13020   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
GAAATATGGGATGAGGTTGGTGAGAGCAACGAGACAAGATGCTTCTTCAGTTGGAGCATGAGTGCTTGGAAGTGTACAAGAGAAAGGTTGAGCAGGCTGCCAAGTCAAGGGCGCAGCTACTTTAAGCTTTGTCTGATGCTAAGCTTGAGCTTTCCACTCTTCTATCAACACTTGGAGAAAAGAGCTTGGCTGGAATTGTTAACTGAGAATACTTCTGGAACTATCAAAGAACAGCTTGCAACTATAGCACCAGTACTTGAACAATTATGGCAACAAAAGGAAGAAAGAATTAAGGAGTTCTTGGATGCACAAGGTAAAAAACAGAGGTTGCACAAGGTAATGCATTTAGAACATTTCTTCTCCTTAATTTTTATTTATGCAATAGTTGTTAAATATATAAGCTCTCAAATGTTAGGAATTTTGATATACTGTGGTTTTTGTCTTGCTAATCAGTGGCATTACCTACTAAATTTTTCTGTTTTATTTCAGGGTTTTGCATCTCTCCCTACAGGAATACAGTTAAAACTCTATAAATTAATAATGTCAGGATCGGAGAAATTTATTAATTTAGAGAGTTATTAA

>Glyma07g13020.1   sequence type=predicted peptide   gene model=Glyma07g13020   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
EIWDEVGESNETRCFFSWSMSAWKCTRERLSRLPSQGRSYFKLCLMLSLSFPLFYQHLEKRAWLELLTENTSGTIKEQLATIAPVLEQLWQQKEERIKEFLDAQGKKQRLHKVMHLEHFFSLIFIYAIVVKYISSQMLGILIYCGFCLANQWHYLLNFSVLFQGFASLPTGIQLKLYKLIMSGSEKFINLESY*







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