|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT5G55230 | AT | Annotation by Michelle Graham. TAIR10: microtubule-associated proteins 65-1 | chr5:22402716-22405182 FORWARD LENGTH=587 | SoyBase | E_val: 1.00E-15 | ISS |
GO:0000272 | GO-bp | Annotation by Michelle Graham. GO Biological Process: polysaccharide catabolic process | SoyBase | N/A | ISS |
GO:0000910 | GO-bp | Annotation by Michelle Graham. GO Biological Process: cytokinesis | SoyBase | N/A | ISS |
GO:0001578 | GO-bp | Annotation by Michelle Graham. GO Biological Process: microtubule bundle formation | SoyBase | N/A | ISS |
GO:0005982 | GO-bp | Annotation by Michelle Graham. GO Biological Process: starch metabolic process | SoyBase | N/A | ISS |
GO:0007020 | GO-bp | Annotation by Michelle Graham. GO Biological Process: microtubule nucleation | SoyBase | N/A | ISS |
GO:0008283 | GO-bp | Annotation by Michelle Graham. GO Biological Process: cell proliferation | SoyBase | N/A | ISS |
GO:0009664 | GO-bp | Annotation by Michelle Graham. GO Biological Process: plant-type cell wall organization | SoyBase | N/A | ISS |
GO:0019344 | GO-bp | Annotation by Michelle Graham. GO Biological Process: cysteine biosynthetic process | SoyBase | N/A | ISS |
GO:0030244 | GO-bp | Annotation by Michelle Graham. GO Biological Process: cellulose biosynthetic process | SoyBase | N/A | ISS |
GO:0031116 | GO-bp | Annotation by Michelle Graham. GO Biological Process: positive regulation of microtubule polymerization | SoyBase | N/A | ISS |
GO:0043622 | GO-bp | Annotation by Michelle Graham. GO Biological Process: cortical microtubule organization | SoyBase | N/A | ISS |
GO:0046785 | GO-bp | Annotation by Michelle Graham. GO Biological Process: microtubule polymerization | SoyBase | N/A | ISS |
GO:0048193 | GO-bp | Annotation by Michelle Graham. GO Biological Process: Golgi vesicle transport | SoyBase | N/A | ISS |
GO:0048528 | GO-bp | Annotation by Michelle Graham. GO Biological Process: post-embryonic root development | SoyBase | N/A | ISS |
GO:0051302 | GO-bp | Annotation by Michelle Graham. GO Biological Process: regulation of cell division | SoyBase | N/A | ISS |
GO:0051322 | GO-bp | Annotation by Michelle Graham. GO Biological Process: anaphase | SoyBase | N/A | ISS |
GO:0005634 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: nucleus | SoyBase | N/A | ISS |
GO:0005737 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm | SoyBase | N/A | ISS |
GO:0005819 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: spindle | SoyBase | N/A | ISS |
GO:0005829 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cytosol | SoyBase | N/A | ISS |
GO:0005874 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: microtubule | SoyBase | N/A | ISS |
GO:0009524 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: phragmoplast | SoyBase | N/A | ISS |
GO:0009574 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: preprophase band | SoyBase | N/A | ISS |
GO:0010005 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cortical microtubule, transverse to long axis | SoyBase | N/A | ISS |
GO:0055028 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cortical microtubule | SoyBase | N/A | ISS |
GO:0005515 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: protein binding | SoyBase | N/A | ISS |
GO:0008017 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: microtubule binding | SoyBase | N/A | ISS |
GO:0046983 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: protein dimerization activity | SoyBase | N/A | ISS |
UniRef100_B9SYY2 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Protein regulator of cytokinesis, putative n=1 Tax=Ricinus communis RepID=B9SYY2_RICCO | SoyBase | E_val: 4.00E-15 | ISS |
UniRef100_I1M6L8 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Glycine max RepID=I1M6L8_SOYBN | SoyBase | E_val: 5.00E-17 | ISS |
Glyma07g13020 not represented in the dataset |
Glyma07g13020 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.07g120100 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma07g13020.1 sequence type=CDS gene model=Glyma07g13020 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high GAAATATGGGATGAGGTTGGTGAGAGCAACGAGACAAGATGCTTCTTCAGTTGGAGCATGAGTGCTTGGAAGTGTACAAGAGAAAGGTTGAGCAGGCTGCCAAGTCAAGGGCGCAGCTACTTTAAGCTTTGTCTGATGCTAAGCTTGAGCTTTCCACTCTTCTATCAACACTTGGAGAAAAGAGCTTGGCTGGAATTGTTAACTGAGAATACTTCTGGAACTATCAAAGAACAGCTTGCAACTATAGCACCAGTACTTGAACAATTATGGCAACAAAAGGAAGAAAGAATTAAGGAGTTCTTGGATGCACAAGGTAAAAAACAGAGGTTGCACAAGGTAATGCATTTAGAACATTTCTTCTCCTTAATTTTTATTTATGCAATAGTTGTTAAATATATAAGCTCTCAAATGTTAGGAATTTTGATATACTGTGGTTTTTGTCTTGCTAATCAGTGGCATTACCTACTAAATTTTTCTGTTTTATTTCAGGGTTTTGCATCTCTCCCTACAGGAATACAGTTAAAACTCTATAAATTAATAATGTCAGGATCGGAGAAATTTATTAATTTAGAGAGTTATTAA
>Glyma07g13020.1 sequence type=predicted peptide gene model=Glyma07g13020 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high EIWDEVGESNETRCFFSWSMSAWKCTRERLSRLPSQGRSYFKLCLMLSLSFPLFYQHLEKRAWLELLTENTSGTIKEQLATIAPVLEQLWQQKEERIKEFLDAQGKKQRLHKVMHLEHFFSLIFIYAIVVKYISSQMLGILIYCGFCLANQWHYLLNFSVLFQGFASLPTGIQLKLYKLIMSGSEKFINLESY*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||