SoyBase
SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
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A newer version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT1G18350 | AT | Annotation by Michelle Graham. TAIR10: MAP kinase kinase 7 | chr1:6315686-6316609 FORWARD LENGTH=307 | SoyBase | E_val: 1.00E-60 | ISS |
| GO:0002229 | GO-bp | Annotation by Michelle Graham. GO Biological Process: defense response to oomycetes | SoyBase | N/A | ISS |
| GO:0006468 | GO-bp | Annotation by Michelle Graham. GO Biological Process: protein phosphorylation | SoyBase | N/A | ISS |
| GO:0009862 | GO-bp | Annotation by Michelle Graham. GO Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway | SoyBase | N/A | ISS |
| GO:0009926 | GO-bp | Annotation by Michelle Graham. GO Biological Process: auxin polar transport | SoyBase | N/A | ISS |
| GO:0042742 | GO-bp | Annotation by Michelle Graham. GO Biological Process: defense response to bacterium | SoyBase | N/A | ISS |
| GO:0004672 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: protein kinase activity | SoyBase | N/A | ISS |
| GO:0004674 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: protein serine/threonine kinase activity | SoyBase | N/A | ISS |
| GO:0004708 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: MAP kinase kinase activity | SoyBase | N/A | ISS |
| GO:0005524 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: ATP binding | SoyBase | N/A | ISS |
| GO:0016301 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: kinase activity | SoyBase | N/A | ISS |
| GO:0016772 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring phosphorus-containing groups | SoyBase | N/A | ISS |
| KOG0581 | KOG | Mitogen-activated protein kinase kinase (MAP2K) | JGI | ISS | |
| PTHR24361 | Panther | MITOGEN-ACTIVATED KINASE KINASE KINASE | JGI | ISS | |
| PTHR24361:SF31 | Panther | JGI | ISS | ||
| PF00069 | PFAM | Protein kinase domain | JGI | ISS | |
| UniRef100_G9JJQ7 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Hematopoietic protein kinase n=1 Tax=Medicago truncatula RepID=G9JJQ7_MEDTR | SoyBase | E_val: 3.00E-80 | ISS |
| UniRef100_UPI00018C6CE5 | UniRef | Annotation by Michelle Graham. Best UniRef hit: UPI00018C6CE5 related cluster n=1 Tax=unknown RepID=UPI00018C6CE5 | SoyBase | E_val: 5.00E-99 | ISS |
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Glyma07g11896 not represented in the dataset |
Glyma07g11896 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|---|---|---|
| Glyma.07g105500 | Wm82.a2.v1 | IGC | As supplied by JGI |
| Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma07g11896.1 sequence type=CDS gene model=Glyma07g11896 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGCCCTTATTCGTCGTCGCCACCCTAACCTCTGCCTCCCCATCTCTAAGCCTATTCAGTGTCGCCCCCACTTCCCCCTTTACTTAACCCTCACCACCACCAAACGCACCACCAATGATGCCATCACCATTGATGACCTTGCGAAACTCATTATTCTCGGCCATGGAAATGGCAGAACCGTCTACAAGGTCTACCATAAAGTCACCTCCATCACTTACGAGTTGAAGATCATCCATGGTGAAATTGACGCCATCACACACTGTCATGCACTCTTAGAAGCATCAATTCTTCGTCGTACCATTGATTGCCTCCATGTGGATCACTTTCATAGCTCTTTCGAGATGCCCATCGGTGATGTGGCAATCCTCATGGAGTACATGGGCGTCCTTAATGGCCTTGCATACCTTCACGCACACAACATTGCGCATCGTGACATCAAGCCCGCAAACATTATCATAAACACTCAAGGGAAGAGTTTGGGTTTGACACTTTTTGAACTCTATGTGGGTCACTTCCCATTACTTCAAGAGGGTCAAAGGCCCAATTGGGCCACTCTTATATGCGTCATTTGCTTTGATGAACCATCGAGCCCCCCAGAGACTGCATCACCAGAATTTTGCAACTTTGTTGAGTGTTGCATCAAGAAGGAGTCTAGCGAAAGGTGGACAACGAGTCAACTCTTGACCCACCCATTTGTTTGCAAAAACTCAAAACCTTGTTAA
>Glyma07g11896.1 sequence type=predicted peptide gene model=Glyma07g11896 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MALIRRRHPNLCLPISKPIQCRPHFPLYLTLTTTKRTTNDAITIDDLAKLIILGHGNGRTVYKVYHKVTSITYELKIIHGEIDAITHCHALLEASILRRTIDCLHVDHFHSSFEMPIGDVAILMEYMGVLNGLAYLHAHNIAHRDIKPANIIINTQGKSLGLTLFELYVGHFPLLQEGQRPNWATLICVICFDEPSSPPETASPEFCNFVECCIKKESSERWTTSQLLTHPFVCKNSKPC*
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||
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