Report for Sequence Feature Glyma07g11580
Feature Type: gene_model
Chromosome: Gm07
Start: 9782362
stop: 9788619
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma07g11580
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT3G18000 AT
Annotation by Michelle Graham. TAIR10: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr3:6154578-6157331 FORWARD LENGTH=491
SoyBase E_val: 0 ISS
GO:0006656 GO-bp
Annotation by Michelle Graham. GO Biological Process: phosphatidylcholine biosynthetic process
SoyBase N/A ISS
GO:0008152 GO-bp
Annotation by Michelle Graham. GO Biological Process: metabolic process
SoyBase N/A ISS
GO:0009555 GO-bp
Annotation by Michelle Graham. GO Biological Process: pollen development
SoyBase N/A ISS
GO:0009826 GO-bp
Annotation by Michelle Graham. GO Biological Process: unidimensional cell growth
SoyBase N/A ISS
GO:0009860 GO-bp
Annotation by Michelle Graham. GO Biological Process: pollen tube growth
SoyBase N/A ISS
GO:0010183 GO-bp
Annotation by Michelle Graham. GO Biological Process: pollen tube guidance
SoyBase N/A ISS
GO:0042425 GO-bp
Annotation by Michelle Graham. GO Biological Process: choline biosynthetic process
SoyBase N/A ISS
GO:0048528 GO-bp
Annotation by Michelle Graham. GO Biological Process: post-embryonic root development
SoyBase N/A ISS
GO:0005737 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm
SoyBase N/A ISS
GO:0005829 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: cytosol
SoyBase N/A ISS
GO:0000234 GO-mf
Annotation by Michelle Graham. GO Molecular Function: phosphoethanolamine N-methyltransferase activity
SoyBase N/A ISS
GO:0008168 GO-mf
Annotation by Michelle Graham. GO Molecular Function: methyltransferase activity
SoyBase N/A ISS
KOG1269
KOG
SAM-dependent methyltransferases
JGI ISS
PTHR10108 Panther
METHYLTRANSFERASE
JGI ISS
PTHR10108:SF328 Panther
SUBFAMILY NOT NAMED
JGI ISS
PF08241 PFAM
Methyltransferase domain
JGI ISS
UniRef100_G7KPT7 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Phosphoethanolamine N-methyltransferase n=1 Tax=Medicago truncatula RepID=G7KPT7_MEDTR
SoyBase E_val: 0 ISS
UniRef100_I1L451 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=3 Tax=Glycine max RepID=I1L451_SOYBN
SoyBase E_val: 0 ISS
Proteins Associated with Glyma07g11580
Locus Gene Symbol Protein Name
PEAMT2 Phosphoethanolamine methyltransferase 2
Expression Patterns of Glyma07g11580
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Paralogs of Glyma07g11580
Paralog Evidence Comments
Glyma09g30650 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma07g11580 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.07g102700 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma07g11580
Coding sequences of Glyma07g11580
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma07g11580.2 sequence type=CDS gene model=Glyma07g11580 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGAGGTAAGAACGAACGAAGTTGCAAAGCAAAGAATAGAAGACGAAGGGTATAGAGCTCATAACAATCCATTTGGTCTTAATTTGTTTCTGTTTTCTTCATTCTGTCAGCCATATATGGCTTCCTTGGCGACGGTGCAAGATGAACGTTGCGTTCAGAGAAGCTACTGGATTGAACATACCACAGATTTGTCCGTAGAGTCAATGATGCTCGATTCCAACGCCTCTGATCTCGACAAGGAAGAAAGACCCGAAGTTTTGTCCCTACTACCAGCATATGAAGGAAAATCAGTTGTAGAACTTGGAGCAGGTATTGGAAGATTCACAGGTGAATTGGCCAAGAAAGCTGGCCAGTTGCTTGCTGTGGATTTCATTGAGAGTGCTATAAAGAAGAATGAAAGCATTAATGGACACCACAAGAATGTCAAGTTCATGTGTGCTGATGTCACTTCTCCAAACTTGCATATTTCTGAAGGATCAGTTGATCTGATGTTCTCCAATTGGTTACTCATGTATCTTTCAGATAAAGAGGTTGAGAATTTAGCTGCAAGGATGATCAAATGGTTAAAAGTTGGTGGATATGTATTCTTCAGAGAATCATGTTTCCACCAATCTGGAGATTCCAAGAGAAAATACAACCCGACTCACTATAGGGAGCCTAGATTTTACACTAAGGTATTTAAAGAGTGCCATACGAGTGATGATACCCGGAATTCCTTTGAACTTTCCCTTGTTGGATGTAAATGTATTGGAGCTTATGTCCGAAATAAGAAGAATCAAAATCAGATTTGCTGGATATGGAAAAAAGTTAGATCACAGGATGATAGGGGGTTCCAGAGGTTCTTAGATAGTGTTGAGTATAATCATAAGGATATTTTACTTTATGAGAGTGTTTTTGGTCAAGGTTTTGTGAGCACAGGAGGACTTGAAACAACCAAGGAATTCGTGGCAAAGTTGGGACTAAAACCTGGCCAGAAAGTACTGGATGTTGGTTGTGGTACTGGGGGAGGTGACATTTACATGGCAGAAAATTTTGATGTTGAGGTTGTTGGCATTGACCTCTCCATAAACATAATTTCTCTTGCCATTGAACGTGCTATTGGACTCAAATGCTGTGTAGAATTTGAGTGTGCCGATTGCACTAAAAAAACATTTCCTGTGAATACATTTGATGTAATCTATTCCCGTGACACATTGTTACACATCAAAGATAAGCCATCACTATTCAGATCATTTTACAAATGGTTGAAGCGTGGAGGTACACTTCTGATTACTGATTACTGCAAAAGTGAAGGAAGTCTATCATTAGGATATGCTGAGTATATAAAGAAAGGGGGATATTATATTCATGACATGAAAACATATTGTCGGATGCTCGAGAATGCTGGATTTGATGATGTTGTTGCCGAGGATCGAACTAATTTGTTCATGAAAACACTACAACAGGAGTTAAATGCCCTTCACAGCAAGAAGGATGATTTCATTGATGACTTCTCGGAGGAAGACTACAATGAAATTACTGAAAGATGGAAGGCCAAGCAGATGCGGGGGGCAGATGGTGAACAAATATGGAGCTTGTTCATTGCCAAGAAATAA
Predicted protein sequences of Glyma07g11580
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma07g11580.2 sequence type=predicted peptide gene model=Glyma07g11580 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MEVRTNEVAKQRIEDEGYRAHNNPFGLNLFLFSSFCQPYMASLATVQDERCVQRSYWIEHTTDLSVESMMLDSNASDLDKEERPEVLSLLPAYEGKSVVELGAGIGRFTGELAKKAGQLLAVDFIESAIKKNESINGHHKNVKFMCADVTSPNLHISEGSVDLMFSNWLLMYLSDKEVENLAARMIKWLKVGGYVFFRESCFHQSGDSKRKYNPTHYREPRFYTKVFKECHTSDDTRNSFELSLVGCKCIGAYVRNKKNQNQICWIWKKVRSQDDRGFQRFLDSVEYNHKDILLYESVFGQGFVSTGGLETTKEFVAKLGLKPGQKVLDVGCGTGGGDIYMAENFDVEVVGIDLSINIISLAIERAIGLKCCVEFECADCTKKTFPVNTFDVIYSRDTLLHIKDKPSLFRSFYKWLKRGGTLLITDYCKSEGSLSLGYAEYIKKGGYYIHDMKTYCRMLENAGFDDVVAEDRTNLFMKTLQQELNALHSKKDDFIDDFSEEDYNEITERWKAKQMRGADGEQIWSLFIAKK*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
