Glyma07g10731 - SoyBase

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Report for Sequence Feature Glyma07g10731

Feature Type:	gene_model
Chromosome:	Gm07
Start:	8964618
stop:	8969194
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma07g10731

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT1G18390	AT	Annotation by Michelle Graham. TAIR10: Protein kinase superfamily protein \| chr1:6327463-6329935 FORWARD LENGTH=654	SoyBase	E_val: 1.00E-87	ISS
GO:0002679	GO-bp	Annotation by Michelle Graham. GO Biological Process: respiratory burst involved in defense response	SoyBase	N/A	ISS
GO:0006468	GO-bp	Annotation by Michelle Graham. GO Biological Process: protein phosphorylation	SoyBase	N/A	ISS
GO:0006984	GO-bp	Annotation by Michelle Graham. GO Biological Process: ER-nucleus signaling pathway	SoyBase	N/A	ISS
GO:0009407	GO-bp	Annotation by Michelle Graham. GO Biological Process: toxin catabolic process	SoyBase	N/A	ISS
GO:0010200	GO-bp	Annotation by Michelle Graham. GO Biological Process: response to chitin	SoyBase	N/A	ISS
GO:0010583	GO-bp	Annotation by Michelle Graham. GO Biological Process: response to cyclopentenone	SoyBase	N/A	ISS
GO:0034976	GO-bp	Annotation by Michelle Graham. GO Biological Process: response to endoplasmic reticulum stress	SoyBase	N/A	ISS
GO:0005576	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: extracellular region	SoyBase	N/A	ISS
GO:0005886	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane	SoyBase	N/A	ISS
GO:0004672	GO-mf	Annotation by Michelle Graham. GO Molecular Function: protein kinase activity	SoyBase	N/A	ISS
GO:0004674	GO-mf	Annotation by Michelle Graham. GO Molecular Function: protein serine/threonine kinase activity	SoyBase	N/A	ISS
GO:0004713	GO-mf	Annotation by Michelle Graham. GO Molecular Function: protein tyrosine kinase activity	SoyBase	N/A	ISS
GO:0005524	GO-mf	Annotation by Michelle Graham. GO Molecular Function: ATP binding	SoyBase	N/A	ISS
GO:0016301	GO-mf	Annotation by Michelle Graham. GO Molecular Function: kinase activity	SoyBase	N/A	ISS
GO:0016772	GO-mf	Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring phosphorus-containing groups	SoyBase	N/A	ISS
KOG1187	KOG	Serine/threonine protein kinase	JGI		ISS
PTHR24420	Panther	FAMILY NOT NAMED	JGI		ISS
PTHR24420:SF426	Panther	SUBFAMILY NOT NAMED	JGI		ISS
PF07714	PFAM	Protein tyrosine kinase	JGI		ISS
UniRef100_B9SFY5	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Wall-associated kinase, putative n=1 Tax=Ricinus communis RepID=B9SFY5_RICCO	SoyBase	E_val: 2.00E-88	ISS
UniRef100_I1KJ01	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1KJ01_SOYBN	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma07g10731

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma07g10731 not represented in the dataset	Glyma07g10731 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Paralogs of Glyma07g10731

Paralog	Evidence	Comments
Glyma09g31293	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.

Gene model name correspondences to Glyma07g10731 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.07g096100	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma07g10731

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Transcripts of Glyma07g10731

Limit To All Plant Sequences

>Glyma07g10731.2   sequence type=transcript   gene model=Glyma07g10731   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
TTTTCATAGAAAAATTGACATTTCAGAGTTCAGACTTTTCCATATTTTCTCCGAAGACTTGTGTTCTGCTGTTCACTTCTTCCTTCCTTCCTTCCTTTTCCTCATCATCTTGTTACACTTCTTCTTTCTTTCCTTTTTAGTACTGTTGTTTAGGCTCACATGCTCAGCACAGAGCCACGTGTTGTAACCTTTGCATGTTGCTTACTTTGCATGTCGTGGTGCTGACTGCATAACTTCATCTCAGTGGCAGAGCATTCCTTGAAAGAGGCCATTCATCCAAAAATTGTTGGGGGGACCTTTGTCTTTCTTGGGATTGTTTGTTCTGCACTAGCATCTCAATGGTCCTGCAAATTAGTAATTTCCTCATGAGAATGGGACTTGGTCTCTTTGAGTGCTGCTTCACTAGCTCTTCTTCTGACACGTTTTCAAAGCAGAGTAAGTGGCGAATCTTGCCCTACAAGAAACTTGCAAAAGTCACAAATAATTTTAACCAATCTCATTGTCTTGGAAAGAGAGGATTTGCCACTGAATATTATGGAAAACTTGAGGATGGGCGTGAGATAACGATCCAGTGCTTTAATGAAGACAAGCACCACATGTTGCAACAGTTTATCAATGAAACTGCTATCCTAAACTACTTGCCTCACAAAAATATTGTGTCAATTTACGGGTGTGCTTCTCATCACAAGGAGTCACTACTAGTGCATGAATACCTATCCAATGGCAATCTTGCTTCTCATCTTCAAAGTGAAATAACCAAAAACAGCACACTACCTTGGCTGACTCGATTGGATATAGCCATTGATATTGCAAATTCATTGGACTATCTTCACTATTATGGCATCATCCACCGCAATGTGAAGTCCAGTAATATTCTCCTAGATGTGAACTTTTGTGCTAAGCTTGCTAACCTTCATCTATCCCGGAAACTTCCAGATGGAGTTCCTGTCTATGCTACCCATGTTACTGGTGATATAATTGGGACATGTAGTTATATAGACCCAGAGTATTTGACAAAAGGCCGGCTTAGCGTAAAAAATGATGTTTATAGCTTTGGAGTGGTGTTGTGTGAGCTCTTCTCATCAAAGCTGGCAAAGAATTGGGTTATGAATGAAGAGGATAGTCTTGCTACCATTTTAAGCAGAAAAATTGAAAACCAAACTTTGGTGGAGCTGTTGGATCCAAGACTCGGCTTTGAATCAAACCTTAAGATCAAGCGGATGATGACTGCTACAGCTGAGCTTGCACATCTATGCATGAAATGTCCACAAGAATTAAGGCCAAATATGGAACAGGTGCTAGAGTCACTCGATGGCATAAAGCAAGGAAGATATGAAACAAACTCAACAAAAGCTTTGAAAATCTTCCACCATGCTGAACTTGAAGAAGCTACCAACAAGTTTGACACTTGCCTTGGAAAGGGAGGGTACGGCACCGTGTACTATGGAAAACTTCAAGATGGGCGAGAGGTTGCAATAAAATGTTTCCATGATGAGAGTGAGACAGAAGAGACCATTAAGCAATTCATGAAAGAAACTGCGATCTTAGGTCTCCTGCACCATGAAAATCTGGTTTCACTTTATGGCCGCACTTCTCGCAATTGCAACAAACACATGCTAGTTTACGAGTACATCTCCAATGGCACTCTTACTAAACATCTTCATGAATCTTCTGGTGGTAAACTACCATGGCATAATAGATTGAATATTGCCATTGAAACTGCTACTGCCTTGGTATTTCTTCATGAATCAGGTATCATCCACCGTGATGTAAAAGGGAGTAATATTCTGTTGGATGAAAATTTTACTGTCAAAGTTGCAGATTTTGGATTCTCACGGTCTCTTCCAGATCATGCTACTCATGTTTCAACTATTCCAGTAGGAACTCGTGCTTACATAGATCCTGACTACTATGAATCTGGAAGGGTCAGTGACAAAAGTGATGTCTATAGTTTTGGGGTTGTCTTGTTCGAACTCATATCATCCATCCGCCCAAGTTTAATGGAAGGCACAGATTATGTTACTCTTGCACAGTTTGCAAAGAGAAAAATTTTAAACAAGGAATTAACCGCTGTAGTGGATCAAAGTTTTTGGCTTGGTGTTGACAAAAACATGATGGAAATGATAACAGCAGTGGCAGAGTTAGCATTTCAGTGTGTGCAGTGTCCCAAGGAACTCAGACCATCCATGAAACAGGTGCTAGATACCCTTGAGGGCATAAGGAAAGGAACATGGGGATTCAACCAGATAACATAGTCCTTATTCATGCTACCAACATTCCTGGTTCTATCAAACCATTCATTTGGTTTGTGGTCTAGTAATTGGATTTTGGCTTAACAGAGATGATTTTGTTCTGCAGTATAGGAATTTCAGGTTAGCCCTATTGTAGGTTAGAAATTTACTTGACTATTTAGGGTGTGTTTGTTTTAGCTGGATTACACTTTGAGGCACGTTGAACATGGATCCTTATGTCACTTGGATTCACGTTCAACGTGGTTTAACAGCAATACAAACATGCTGTTACATGATACATGTAAATGCATTCCATGTTCTAAATGTATAAGAAAGACCAAAAGCTGGAAACCATCTCAGAATTGCAGTACATCACTTCAAACATTATCCTCCTCCTCCTCTTTAAAGTAAAAACATGGATAATTCCTTAGTAGAGATAAAGGGAGTTGTCAAATGTCAATATTAAAAATAAAAGGCGTAACCCGTCGGCAGCTGTTGTACA

Coding sequences of Glyma07g10731

Limit To All Plant Sequences

>Glyma07g10731.1   sequence type=CDS   gene model=Glyma07g10731   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGTCCTGCAAATTAGTAATTTCCTCATGAGAATGGGACTTGGTCTCTTTGAGTGCTGCTTCACTAGCTCTTCTTCTGACACGTTTTCAAAGCAGAGTAAGTGGCGAATCTTGCCCTACAAGAAACTTGCAAAAGTCACAAATAATTTTAACCAATCTCATTGTCTTGGAAAGAGAGGATTTGCCACTGAATATTATGGAAAACTTGAGGATGGGCGTGAGATAACGATCCAGTGCTTTAATGAAGACAAGCACCACATGTTGCAACAGTTTATCAATGAAACTGCTATCCTAAACTACTTGCCTCACAAAAATATTGTGTCAATTTACGGGTGTGCTTCTCATCACAAGGAGTCACTACTAGTGCATGAATACCTATCCAATGGCAATCTTGCTTCTCATCTTCAAAGTGAAATAACCAAAAACAGCACACTACCTTGGCTGACTCGATTGGATATAGCCATTGATATTGCAAATTCATTGGACTATCTTCACTATTATGGCATCATCCACCGCAATGTGAAGTCCAGTAATATTCTCCTAGATGTGAACTTTTGTGCTAAGCTTGCTAACCTTCATCTATCCCGGAAACTTCCAGATGGAGTTCCTGTCTATGCTACCCATGTTACTGGTGATATAATTGGGACATGTAGTTATATAGACCCAGAGTATTTGACAAAAGGCCGGCTTAGCGTAAAAAATGATGTTTATAGCTTTGGAGTGGTGTTGTGTGAGCTCTTCTCATCAAAGCTGGCAAAGAATTGGGTTATGAATGAAGAGGATAGTCTTGCTACCATTTTAAGCAGAAAAATTGAAAACCAAACTTTGGTGGAGCTGTTGGATCCAAGACTCGGCTTTGAATCAAACCTTAAGATCAAGCGGATGATGACTGCTACAGCTGAGCTTGCACATCTATGCATGAAATGTCCACAAGAATTAAGGCCAAATATGGAACAGGTGCTAGAGTCACTCGATGGCATAAAGCAAGGAAGATATGAAACAAACTCAACAAAAGCTTTGAAAATCTTCCACCATGCTGAACTTGAAGAAGCTACCAACAAGTTTGACACTTGCCTTGGAAAGGGAGGGTACGGCACCGTGTACTATGGAAAACTTCAAGATGGGCGAGAGGTTGCAATAAAATGTTTCCATGATGAGAGTGAGACAGAAGAGACCATTAAGCAATTCATGAAAGAAACTGCGATCTTAGGTCTCCTGCACCATGAAAATCTGGTTTCACTTTATGGCCGCACTTCTCGCAATTGCAACAAACACATGCTAGTTTACGAGTACATCTCCAATGGCACTCTTACTAAACATCTTCATGAATCTTCTGGTGGTAAACTACCATGGCATAATAGATTGAATATTGCCATTGAAACTGCTACTGCCTTGGTATTTCTTCATGAATCAGGTATCATCCACCGTGATGTAAAAGGGAGTAATATTCTGTTGGATGAAAATTTTACTGTCAAAGTTGCAGATTTTGGATTCTCACGGTCTCTTCCAGATCATGCTACTCATGTTTCAACTATTCCAGTAGGAACTCGTGCTTACATAGATCCTGACTACTATGAATCTGGAAGGGTCAGTGACAAAAGTGATGTCTATAGTTTTGGGGTTGTCTTGTTCGAACTCATATCATCCATCCGCCCAAGTTTAATGGAAGGCACAGATTATGTTACTCTTGCACAGTTTGCAAAGAGAAAAATTTTAAACAAGGAATTAACCGCTGTAGTGGATCAAAGTTTTTGGCTTGGTGTTGACAAAAACATGATGGAAATGATAACAGCAGTGGCAGAGTTAGCATTTCAGTGTGTGCAGTGTCCCAAGGAACTCAGACCATCCATGAAACAGGTGCTAGATACCCTTGAGGGCATAAGGAAAGGAACATGGGGATTCAACCAGATAACATAG

>Glyma07g10731.2   sequence type=CDS   gene model=Glyma07g10731   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGTCCTGCAAATTAGTAATTTCCTCATGAGAATGGGACTTGGTCTCTTTGAGTGCTGCTTCACTAGCTCTTCTTCTGACACGTTTTCAAAGCAGAGTAAGTGGCGAATCTTGCCCTACAAGAAACTTGCAAAAGTCACAAATAATTTTAACCAATCTCATTGTCTTGGAAAGAGAGGATTTGCCACTGAATATTATGGAAAACTTGAGGATGGGCGTGAGATAACGATCCAGTGCTTTAATGAAGACAAGCACCACATGTTGCAACAGTTTATCAATGAAACTGCTATCCTAAACTACTTGCCTCACAAAAATATTGTGTCAATTTACGGGTGTGCTTCTCATCACAAGGAGTCACTACTAGTGCATGAATACCTATCCAATGGCAATCTTGCTTCTCATCTTCAAAGTGAAATAACCAAAAACAGCACACTACCTTGGCTGACTCGATTGGATATAGCCATTGATATTGCAAATTCATTGGACTATCTTCACTATTATGGCATCATCCACCGCAATGTGAAGTCCAGTAATATTCTCCTAGATGTGAACTTTTGTGCTAAGCTTGCTAACCTTCATCTATCCCGGAAACTTCCAGATGGAGTTCCTGTCTATGCTACCCATGTTACTGGTGATATAATTGGGACATGTAGTTATATAGACCCAGAGTATTTGACAAAAGGCCGGCTTAGCGTAAAAAATGATGTTTATAGCTTTGGAGTGGTGTTGTGTGAGCTCTTCTCATCAAAGCTGGCAAAGAATTGGGTTATGAATGAAGAGGATAGTCTTGCTACCATTTTAAGCAGAAAAATTGAAAACCAAACTTTGGTGGAGCTGTTGGATCCAAGACTCGGCTTTGAATCAAACCTTAAGATCAAGCGGATGATGACTGCTACAGCTGAGCTTGCACATCTATGCATGAAATGTCCACAAGAATTAAGGCCAAATATGGAACAGGTGCTAGAGTCACTCGATGGCATAAAGCAAGGAAGATATGAAACAAACTCAACAAAAGCTTTGAAAATCTTCCACCATGCTGAACTTGAAGAAGCTACCAACAAGTTTGACACTTGCCTTGGAAAGGGAGGGTACGGCACCGTGTACTATGGAAAACTTCAAGATGGGCGAGAGGTTGCAATAAAATGTTTCCATGATGAGAGTGAGACAGAAGAGACCATTAAGCAATTCATGAAAGAAACTGCGATCTTAGGTCTCCTGCACCATGAAAATCTGGTTTCACTTTATGGCCGCACTTCTCGCAATTGCAACAAACACATGCTAGTTTACGAGTACATCTCCAATGGCACTCTTACTAAACATCTTCATGAATCTTCTGGTGGTAAACTACCATGGCATAATAGATTGAATATTGCCATTGAAACTGCTACTGCCTTGGTATTTCTTCATGAATCAGGTATCATCCACCGTGATGTAAAAGGGAGTAATATTCTGTTGGATGAAAATTTTACTGTCAAAGTTGCAGATTTTGGATTCTCACGGTCTCTTCCAGATCATGCTACTCATGTTTCAACTATTCCAGTAGGAACTCGTGCTTACATAGATCCTGACTACTATGAATCTGGAAGGGTCAGTGACAAAAGTGATGTCTATAGTTTTGGGGTTGTCTTGTTCGAACTCATATCATCCATCCGCCCAAGTTTAATGGAAGGCACAGATTATGTTACTCTTGCACAGTTTGCAAAGAGAAAAATTTTAAACAAGGAATTAACCGCTGTAGTGGATCAAAGTTTTTGGCTTGGTGTTGACAAAAACATGATGGAAATGATAACAGCAGTGGCAGAGTTAGCATTTCAGTGTGTGCAGTGTCCCAAGGAACTCAGACCATCCATGAAACAGGTGCTAGATACCCTTGAGGGCATAAGGAAAGGAACATGGGGATTCAACCAGATAACATAG

Predicted protein sequences of Glyma07g10731

Limit To All Plant Sequences

>Glyma07g10731.1   sequence type=predicted peptide   gene model=Glyma07g10731   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MVLQISNFLMRMGLGLFECCFTSSSSDTFSKQSKWRILPYKKLAKVTNNFNQSHCLGKRGFATEYYGKLEDGREITIQCFNEDKHHMLQQFINETAILNYLPHKNIVSIYGCASHHKESLLVHEYLSNGNLASHLQSEITKNSTLPWLTRLDIAIDIANSLDYLHYYGIIHRNVKSSNILLDVNFCAKLANLHLSRKLPDGVPVYATHVTGDIIGTCSYIDPEYLTKGRLSVKNDVYSFGVVLCELFSSKLAKNWVMNEEDSLATILSRKIENQTLVELLDPRLGFESNLKIKRMMTATAELAHLCMKCPQELRPNMEQVLESLDGIKQGRYETNSTKALKIFHHAELEEATNKFDTCLGKGGYGTVYYGKLQDGREVAIKCFHDESETEETIKQFMKETAILGLLHHENLVSLYGRTSRNCNKHMLVYEYISNGTLTKHLHESSGGKLPWHNRLNIAIETATALVFLHESGIIHRDVKGSNILLDENFTVKVADFGFSRSLPDHATHVSTIPVGTRAYIDPDYYESGRVSDKSDVYSFGVVLFELISSIRPSLMEGTDYVTLAQFAKRKILNKELTAVVDQSFWLGVDKNMMEMITAVAELAFQCVQCPKELRPSMKQVLDTLEGIRKGTWGFNQIT*

>Glyma07g10731.2   sequence type=predicted peptide   gene model=Glyma07g10731   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MVLQISNFLMRMGLGLFECCFTSSSSDTFSKQSKWRILPYKKLAKVTNNFNQSHCLGKRGFATEYYGKLEDGREITIQCFNEDKHHMLQQFINETAILNYLPHKNIVSIYGCASHHKESLLVHEYLSNGNLASHLQSEITKNSTLPWLTRLDIAIDIANSLDYLHYYGIIHRNVKSSNILLDVNFCAKLANLHLSRKLPDGVPVYATHVTGDIIGTCSYIDPEYLTKGRLSVKNDVYSFGVVLCELFSSKLAKNWVMNEEDSLATILSRKIENQTLVELLDPRLGFESNLKIKRMMTATAELAHLCMKCPQELRPNMEQVLESLDGIKQGRYETNSTKALKIFHHAELEEATNKFDTCLGKGGYGTVYYGKLQDGREVAIKCFHDESETEETIKQFMKETAILGLLHHENLVSLYGRTSRNCNKHMLVYEYISNGTLTKHLHESSGGKLPWHNRLNIAIETATALVFLHESGIIHRDVKGSNILLDENFTVKVADFGFSRSLPDHATHVSTIPVGTRAYIDPDYYESGRVSDKSDVYSFGVVLFELISSIRPSLMEGTDYVTLAQFAKRKILNKELTAVVDQSFWLGVDKNMMEMITAVAELAFQCVQCPKELRPSMKQVLDTLEGIRKGTWGFNQIT*

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