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Report for Sequence Feature Glyma07g10475

Feature Type:gene_model
Chromosome:Gm07
Start:8751277
stop:8756338
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma07g10475
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G66930AT Annotation by Michelle Graham. TAIR10: Protein kinase superfamily protein | chr1:24970523-24973069 FORWARD LENGTH=674 SoyBaseE_val: 1.00E-102ISS
GO:0006468GO-bp Annotation by Michelle Graham. GO Biological Process: protein phosphorylation SoyBaseN/AISS
GO:0005886GO-cc Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane SoyBaseN/AISS
GO:0004672GO-mf Annotation by Michelle Graham. GO Molecular Function: protein kinase activity SoyBaseN/AISS
GO:0004674GO-mf Annotation by Michelle Graham. GO Molecular Function: protein serine/threonine kinase activity SoyBaseN/AISS
GO:0004713GO-mf Annotation by Michelle Graham. GO Molecular Function: protein tyrosine kinase activity SoyBaseN/AISS
GO:0005524GO-mf Annotation by Michelle Graham. GO Molecular Function: ATP binding SoyBaseN/AISS
GO:0016301GO-mf Annotation by Michelle Graham. GO Molecular Function: kinase activity SoyBaseN/AISS
GO:0016772GO-mf Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring phosphorus-containing groups SoyBaseN/AISS
KOG2345 KOG Serine/threonine protein kinase/TGF-beta stimulated factor JGI ISS
PTHR24420Panther FAMILY NOT NAMED JGI ISS
PTHR24420:SF441Panther SUBFAMILY NOT NAMED JGI ISS
PF00069PFAM Protein kinase domain JGI ISS
UniRef100_G7KMN1UniRef Annotation by Michelle Graham. Most informative UniRef hit: Kinase R-like protein n=1 Tax=Medicago truncatula RepID=G7KMN1_MEDTR SoyBaseE_val: 0ISS
UniRef100_UPI000233909CUniRef Annotation by Michelle Graham. Best UniRef hit: UPI000233909C related cluster n=1 Tax=unknown RepID=UPI000233909C SoyBaseE_val: 0ISS

Expression Patterns of Glyma07g10475
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma07g10475 not represented in the dataset
Glyma07g10475 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma07g10475 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.07g094200 Wm82.a2.v1IGC As supplied by JGI

References for Glyma07g10475
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma07g10475
>Glyma07g10475.1   sequence type=CDS   gene model=Glyma07g10475   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTCAATACTCAATAATCATATCCCCATGCTCCTTACGTCCCTACGCACCATCTCTTGGTTATTGTTAACCACTTTGCCTCAGTCTCAGTCTCAAACACCCGCTGATCACAGTTTTTCTGTTTGTAATGAGCAGTCATACAACTGCGGAACATTGTCCAACATCTCCTATCCTTTCTGGGGACTCAACCGATCCCGTCAATGTGGCCGCGGTGGTGACGCATTCAAGCTCACATGCCATGATGATAAGACTACTTCAATCCGAATTGCCACTCAAAATTTCACAGTGAAGGACATCAACATCACCGCTCAAACCATGATATTGGTGCGAGCAGACCTTGCCCTCAACGTTTGTTCTCCGCAATTTGGGGACACTTATTTGAGTCCTAGTCTGTTCCAGTATGGTTCATCCGTGTACAACATCACCATATTCTACAATTGCTCCTCCACATCCTATATAGATACCAGTCTTGCGGCATTCAAGTGTGGATATGAGAATACTCTCTTTACTGATGGTGTAGAATATGGGCTGTTGAGAACATTTCCATGGCTTGAGAGATGCGGGCGACAAGTCCAAGTGCCGCTAGATGTCGTTTATGATAGTAACGGTGGGCGTGATTTTCTGAAACAAGCTTTCACTAGCGGCTTTCTGGTCAACTATACTGTTCTCAACACTGTTCCTGTTGACAATAGTAAAGTTAATTTGACAAGGAAAATCATCGTAGCTGTTGGTGTGGTAATGGGAGGATTCATAACATGCATCGTAATAATTTACTGTTGTAGCTGTAAATATATGTCATCAACACAAGTAAAATTTTGGTTGACGGGAAAGAATGACCTAGATATCGAAGCATTCTTAAAAGATCGTGGAACTCTAGCACAAAAGAGATATAAATTTTCAGAAGTCAAGAAAATGACCAACTCCTTCAAAGTTAAACTGGGTGAAGGTGGCTTTGGTGCTGTATACAAAGGAGAGCTACTCAGTGGTTGCCCTGTGGCCGTAAAAATATTAAATTCATCTAAAGGAAATGGTGAAGGCTTTATCAATGAGGTTTCTAGTATTAGTAGAACTGCTCATGTTAATGTTGTCACACTTTTTGGATTCTGCTTGGAAGACAGCAAGAAAGCTCTCATCTATGAATTTATGCATAATGGTTCCCTTGACAAGTTTATTTACAACAAGGGACTTGAAGCTACTGCATCATTGAGTTGGGATAATTTGTGGCAAATTTCCTTAGGGATAGCCCGAGGACTAGAGTATTTGCATAGGGGATGCAACACTCGTATCTTACATTTTGATATAAAACCACATAACATTCTTCTGGACGAGAACTTTTGCCCCAAGATATCAGATTTTGGGCTTGCAAAGCTTTGTCCTAGGAAAGAGAGCATTATTTCCATGTCATATGCTAGAGGGACAGTAGGATATGTTGCTCCAGAAGTGTGCAACAAACACTTTGGTGGAATTTCACACAAATCTGATGTCTACAGCTATGGAATGATGCTGCTTGAAATGGTGGGAGTGAAGAAGAATATTAATGCAGAAGTCAGTCAGACA
Predicted protein sequences of Glyma07g10475
>Glyma07g10475.1   sequence type=predicted peptide   gene model=Glyma07g10475   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MSILNNHIPMLLTSLRTISWLLLTTLPQSQSQTPADHSFSVCNEQSYNCGTLSNISYPFWGLNRSRQCGRGGDAFKLTCHDDKTTSIRIATQNFTVKDINITAQTMILVRADLALNVCSPQFGDTYLSPSLFQYGSSVYNITIFYNCSSTSYIDTSLAAFKCGYENTLFTDGVEYGLLRTFPWLERCGRQVQVPLDVVYDSNGGRDFLKQAFTSGFLVNYTVLNTVPVDNSKVNLTRKIIVAVGVVMGGFITCIVIIYCCSCKYMSSTQVKFWLTGKNDLDIEAFLKDRGTLAQKRYKFSEVKKMTNSFKVKLGEGGFGAVYKGELLSGCPVAVKILNSSKGNGEGFINEVSSISRTAHVNVVTLFGFCLEDSKKALIYEFMHNGSLDKFIYNKGLEATASLSWDNLWQISLGIARGLEYLHRGCNTRILHFDIKPHNILLDENFCPKISDFGLAKLCPRKESIISMSYARGTVGYVAPEVCNKHFGGISHKSDVYSYGMMLLEMVGVKKNINAEVSQT






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