Report for Sequence Feature Glyma07g05100
Feature Type: gene_model
Chromosome: Gm07
Start: 3769705
stop: 3780748
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma07g05100
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT3G14270 AT
Annotation by Michelle Graham. TAIR10: phosphatidylinositol-4-phosphate 5-kinase family protein | chr3:4754624-4761185 FORWARD LENGTH=1791
SoyBase E_val: 0 ISS
GO:0007033 GO-bp
Annotation by Michelle Graham. GO Biological Process: vacuole organization
SoyBase N/A ISS
GO:0007165 GO-bp
Annotation by Michelle Graham. GO Biological Process: signal transduction
SoyBase N/A ISS
GO:0009555 GO-bp
Annotation by Michelle Graham. GO Biological Process: pollen development
SoyBase N/A ISS
GO:0010256 GO-bp
Annotation by Michelle Graham. GO Biological Process: endomembrane system organization
SoyBase N/A ISS
GO:0044267 GO-bp
Annotation by Michelle Graham. GO Biological Process: cellular protein metabolic process
SoyBase N/A ISS
GO:0046488 GO-bp
Annotation by Michelle Graham. GO Biological Process: phosphatidylinositol metabolic process
SoyBase N/A ISS
GO:0005737 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm
SoyBase N/A ISS
GO:0005739 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: mitochondrion
SoyBase N/A ISS
GO:0005768 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: endosome
SoyBase N/A ISS
GO:0000285 GO-mf
Annotation by Michelle Graham. GO Molecular Function: 1-phosphatidylinositol-3-phosphate 5-kinase activity
SoyBase N/A ISS
GO:0005524 GO-mf
Annotation by Michelle Graham. GO Molecular Function: ATP binding
SoyBase N/A ISS
GO:0008270 GO-mf
Annotation by Michelle Graham. GO Molecular Function: zinc ion binding
SoyBase N/A ISS
GO:0016307 GO-mf
Annotation by Michelle Graham. GO Molecular Function: phosphatidylinositol phosphate kinase activity
SoyBase N/A ISS
GO:0016308 GO-mf
Annotation by Michelle Graham. GO Molecular Function: 1-phosphatidylinositol-4-phosphate 5-kinase activity
SoyBase N/A ISS
GO:0035091 GO-mf
Annotation by Michelle Graham. GO Molecular Function: phosphatidylinositol binding
SoyBase N/A ISS
GO:0046872 GO-mf
Annotation by Michelle Graham. GO Molecular Function: metal ion binding
SoyBase N/A ISS
KOG0230
KOG
Phosphatidylinositol-4-phosphate 5-kinase and related FYVE finger-containing proteins
JGI ISS
PTHR11353 Panther
CHAPERONIN
JGI ISS
PTHR11353:SF14 Panther
FYVE FINGER-CONTAINING PHOSPHOINOSITIDE KINASE, FYV1
JGI ISS
PF00118 PFAM
TCP-1/cpn60 chaperonin family
JGI ISS
PF01363 PFAM
FYVE zinc finger
JGI ISS
PF01504 PFAM
Phosphatidylinositol-4-phosphate 5-Kinase
JGI ISS
UniRef100_G7L966 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: 1-phosphatidylinositol-3-phosphate 5-kinase n=1 Tax=Medicago truncatula RepID=G7L966_MEDTR
SoyBase E_val: 0 ISS
UniRef100_UPI000233850F UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI000233850F related cluster n=1 Tax=unknown RepID=UPI000233850F
SoyBase E_val: 0 ISS
Expression Patterns of Glyma07g05100
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Paralogs of Glyma07g05100
Paralog Evidence Comments
Glyma16g01590 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma07g05100 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.07g045600 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma07g05100
Coding sequences of Glyma07g05100
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma07g05100.1 sequence type=CDS gene model=Glyma07g05100 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGATGCAGTGGACAAGACTTTTTCTGAGCTTGTCAGCATTGTCAAATCATGGATTCCCTGGCGATCTGAGCCAGTAAATGTGTCTAGAGATTTTTGGATGCCCGATCAGAGTTGTAGAGTATGCTACGAGTGTGATTCACAGTTCACCTTATTTAACCGTAAACACCACTGTCGTCTTTGTGGGCGAATTTTCTGTAACAAGTGTACAACAAACTCGGTTCCTGCCCCATTTAGCAACCAAAGGAATTCTTGGGATGAGTTGGAAAAGATTCGCGTTTGTAATTATTGTTACAAGCAATGGGAGCAGGGCATAGTTGCTTTTGATAACAGTATTCCTGTTTCCAATCTGGATAATAGTGCTTCCGGATCAACTTCAAGCGTGGCTAGCAGTAAAACCAGTGCCACTGCAAACAGTAGTAATATTACTCTTTGCTCCATGCCATATTCAGTTGGGTCTTATCAACCAATGCAACAGGGTTCTGTTCTGAACCTGCATAAATCACCTGTGAAGGGGAAAGACCCCGATACTGATAGGGAAGGCTTATCAGCATTAGGAGGGAGGAGTGATCTTGTAGCAGACCTGGGTGATCCATTACCGAAGCAATACAGATTCTCAATAAACAGGAGTGATGATGATGAGGATGAGTATGGTGTATATCGGTCAGATTCTGATATGAGGGATTATCCTCAAGTGAATAACTACTATGTACAAGCTGAGCTTCACGGGATAGGCAACATTGATGGCTCACAGAAAGTGGATCTTGATGGAGAAAACACTAATGCCAAACTCCCTTCAAACTACAGTTTTGACACACAGGATTTGGAAGGAGCCCAAGTTATTGCCAAAAATGAAGATGAACCTTATATCTGTGATGAAAATGAAGCCCCTTCCTCGTTGTATGTTTCAGAGGATGTTGATGCTGAACCTGTTGATTTTGAAAATAATGGACTTCTCTGGCTCCCTCCTGAACCAGAAGATGAAGAAGATGAACAGGAAGCTATTCTGTTTGATGATGATGATGATCATGACGGGAATGCCACCGGAGAGTGGGGCTATCTGCGCAGTTCAAGCAGTTTTGGAAGTGGTGAGTACCGACACAGAGATAGGTCAAGCGAGGAGCACAAGAATGTAATGAAGAATGTAGTTGATGGGCATTTTAGGGCATTGGTATCTCAGCTGTTACAGGTTGAGAACTTACCTGTCGAAGATAATGACAAAAACAGTTGGTTGGAGATTGTCACATCTCTGTCATGGGAAGCTGCTACTTTATTGAAACCAGATATGAGCAAAGGTGGTGGGATGGACCCAGCTGGTTATGTGAAAGTCAAATGCATAGCATGTGGGAGCCGCATTGAAAGTGTGGTGGTTAAAGGAGTTGTTTGTAAGAAAAATGTGGCTCACCGGAGAATGACGTCAAAAGTGGATAAACCTCGCTTGTTGATCCTTGGAGGGGCTCTAGAGTATCAACGTGTTACCAACCTCTTATCTAGTGTAGATACCCTATTGCAGCAGGAAATGGACCATCTGAAGATGGCAGTGGCAAAGATAGCTTCACACCAACCAAACATCTTGTTGGTGGAGAAATCAGTCTCGCGATATGCGCAGGAATATCTTCTTGCAAAGGACATATCTTTGGTTCTCAATGTCAAGAGACCACTTTTGGAGCGCGTAGCACGTTGCACAGGCACTCAAATAGTGCCTTCAATTGATCATCTGTCATCACAAAAGTTGGGTTACTGTGAAACATTTCATGTTGAAAAGTTTCTTGAAGACCTAAATAGTGCTGGTCAGGGTGGGAAAAAAACAATGAAAACATTGATGTTTTTCGAAGGTTGCCCAAAACCATTGGGTTTCACAATTTTACTTAAAGGTGCTGACAAGGATGAATTGAAGAAGGTAAAACATGTGGTTCAGTATGGAGTTTTTGCAGCTTACCATTTGGCTTTGGAGACATCTTTTCTTGCAGATGAAGGAGTCTCCCTGCCAGAAATTCCATTAAACAGTCTGGCCCTTCCTGATAAATCATCATCCATTCAGAGGTCTATTTCAACAGTTCCTGGTTTCGGCATTGCTGACAATGAAAAGCCTCAAGGGCTAGAACCTTACACTGAACCACAGAGAACCAAAAGTCTCACAGCTGCTGATCTAGCCTCGTCAACCTGCGGTACAGGGCCGTGTTTGTCTAATGGTGCTTCTCAATCTATGGCACTTGGATCAAGTCTCAACTATTCAACTGCCTTATACTCCTCCATTGTTGCTTCAGGAAATTCAATTCCAGAATCGCACCATAATAAGCTTCTTTCATGCACTAGTAGAGACACAAATGAAATGAACTCCAAACAAACTGTGGTGGAAGAAACTTCTAGAGTGGACAACACATTAGTTGTTGGGGATGATCCTACTGTAGAGGACCCTGGATCTTCAGAGAAATTATATCAAGGCATGTCAGCTGACACTCCACAAAATGGTGATAGCAAAATCTCTAAAAATCAGTTAAGTGGGTCAGGATCTTTATCTCCAAAAGATGTTCAAAACCATCCCGAGAACCTTGAAATCACAAATGAAGAGCCAGTTCCCGAAAAAGAAGAGTTTCCTCCATCTCCCTCCGACCATCAAAGCATTTTGGTGTCTTTGTCCTCCCGGTGCGTTTGGAAGGGAACTGTATGTGAGAGGTCTCATCTCTTTCGCATTAAATACTATGGCAGCTTTGATAAACCATTGGGTCGATTTCTGCGGGACCATTTATTTGATCAGAGTTATCGATGCCATTCTTGTGAAATGCCATCAGAAGCACATGTGCATTGCTATACTCATCGACAGGGAACACTTACCATATCCGTCAAGAAACTACCAGAAATTATCCTACCTGGTGAAAGGGATGGAAAGATTTGGATGTGGCACAGGTGCTTGCGGTGTCCAAGAATCAACGGCTTTCCTCCTGCTACACAGAGAATAATAATGTCTGATGCTGCTTGGGGTTTATCACTTGGGAAGTTTTTGGAGCTCAGTTTCTCAAACCACGCTGCAGCCAGCAGGGTGGCCAGCTGTGGTCATTCTTTACACAGAGATTGTCTTCGTTTTTATGGATTTGGAAGAATGGTTGCTTGTTTTCGATATGCATCAATTGATGTTCACTCAGTCTACCTTCCCCCCCACACACTTATATTTGATTATGGGAATCAGGATTGGATACAACAAGAATCAGATGAGGTGGTCAATCGGGCAGAGCTTTTATTCTCTGAGGTCCTCAATGGTCTTAGTCAAATTGGAGAGCAAAGATCTAATGCACTCCAAGTCAGTAATGGCCATAAATCACCTGAATTAAGACGCCAAGTTGCTGAACTAGAGGGGATGTTGCAAAAGGAGAAACTAGAATTTGAGGAAACTCTTCAAAAGATTTTGAACCAAGAAAAGAGAAATGGCCAACCTGGGATTGATGTTCTGGAAATTAATCGATTGTGGAGGCAGTTACTTTTTCAATCATATATGTGGGACCACCGTCTTATTTATGCTGCCAACCTAGTCAATTCCAACTATGAATCTGGTTCAAGCAGTCCAATTTCAGAGGATAAGGAGAAACCTACTGATGAAAATCAGATGAGCATTAACTCTATTCATGGTGATCCAAAGCTTAACGGTAGCCCCAGCCATGGAGGAGGAAGTGTAGTAGTTGATGGCAAAATTTCACATGATGCATCGCATCAAGAAATTGACATGGTCAAAAATAAAAATCTTGAGAAAGATGACGAATCTGATCTTCCAAACAGCAAAAGCATAAATGATCAATCCAACCTTTTAGAACCTGAATTGGGTGTTGGCAGAGCTCTCTCTGATGGACCGTTTCCTGTCATTCCTAGTTTGTCTGAAACACTTGATGCAAAATGGACTGGTGAAAACCACTCAGGATATGGAATTCAAAAGGATAACAGTTCTGTAAATCCTGATATACTTATGGCAGATGCTTTGACGACCAGTGCACAAAAAGAAACATATTATCTAGGGGATCGTACAGAAGATCAAAATGGTTCCAAGAGTTTCTATTCTTCTTTTAAAGGTCATGATAATATGGAAGACTCTTCAAACTGGTTAGGAATGCCCTTCTTGAACTTCTATCGCCAATTTAACAGGAACCTTTTTGCTAGTACACAGAAGTTTGATACCCTAGTTGACTACAATCCTGTTTATGTGTCATCTTTCCGGAAGCAAGAACTCCAGGGTGGGGCAAGGCTGCTTCTACCAATTGGTGTCAATGACACTGTAATTCCAGTATATGATGATGAACCCTCAAGTATTATAGCTTATGCCTTAATGTCACCAGAATATCATTTCCAATTAAATGATGAAGGAGAAAGGCCAAGAGAAGGAAATGAGTTCACTTCATCATATTTTTCTGACTCAGGCACCTTGCAGTCATTCTCATCTGTTGACGAAACAGCTTTTGATTCTCAAAAAAGTTTTGGATCGATAGAGGAAATGATATTTTCCATGTCTGGGTCTCGTAATTCATCAATATTGGACCCAATGTTATATACTAAGGCTATGCATGCTAGAGTTTCCTTTGGAGTAGATGGTCCCCTTGGCAAGGTAAAATATTCTGTGACTTGTTACTATGCCAAGCGATTTGAAGCCTTAAGAAGGGTCTGTTGTCCTTCAGAGCTAGACTATATAAGGTCTCTGAGTCGCTGTAAGAAATGGGGAGCTCAAGGTGGGAAGAGTAATGTATTCTTTGCAAAAACTTTGGATGATCGATTTATCATCAAACAAGTTACCAAAACAGAGCTTGAGTCATTCATTAAATTTGGTCCTGAATACTTCAAGTACCTTTCTGAATCCATAGGCACTGGAAGTCCGACTTGCCTGGCAAAGATTCTTGGCATATACCAGGTTACATCAAAGCATCTTAAAGGAGGGAAGGAATCAAGGATGGATGTTTTGGTTATGGAGAATCTTCTGTTTAGGAGGACTGTGACACGACTTTATGATCTTAAAGGATCTTCCAGGTCTCGGTATAATGCAGATAGTACCGGGAAAAACAAAGTTCTACTGGACCAGAACTTAATTGAAGCAATGCCAACTTCTCCTATTTTCGTGGGAAACAAAGCGAAAAGATTGTTAGAGAGAGCTGTCTGGAATGACACTGGTTTTCTTGCTTCAGTTGCTGTGATGGACTATTCTTTACTGGTTGGAGTGGATGAAGAGAAGCATGAGTTGGTTATTGGAATCATTGATTTCATGAGGCAGTATACCTGGGACAAGCATCTTGAAACATGGGTAAAAGCTTCAGGCATCCTTGGAGGACCAAAGAACACATCTCCTACAGTTATATCACCCAAGCAATACAAGAAAAGGTTCAGGAAAGCAATGACCACTTACTTTCTCATGCTTCCTGATCAGTGGTCTCCTTCTATTATTCCTAGTCATTCTCAGTCTGATTTTGGTGAAGACAACACACAACCTAGGACTCCAGCTGAATGA
Predicted protein sequences of Glyma07g05100
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma07g05100.1 sequence type=predicted peptide gene model=Glyma07g05100 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MDAVDKTFSELVSIVKSWIPWRSEPVNVSRDFWMPDQSCRVCYECDSQFTLFNRKHHCRLCGRIFCNKCTTNSVPAPFSNQRNSWDELEKIRVCNYCYKQWEQGIVAFDNSIPVSNLDNSASGSTSSVASSKTSATANSSNITLCSMPYSVGSYQPMQQGSVLNLHKSPVKGKDPDTDREGLSALGGRSDLVADLGDPLPKQYRFSINRSDDDEDEYGVYRSDSDMRDYPQVNNYYVQAELHGIGNIDGSQKVDLDGENTNAKLPSNYSFDTQDLEGAQVIAKNEDEPYICDENEAPSSLYVSEDVDAEPVDFENNGLLWLPPEPEDEEDEQEAILFDDDDDHDGNATGEWGYLRSSSSFGSGEYRHRDRSSEEHKNVMKNVVDGHFRALVSQLLQVENLPVEDNDKNSWLEIVTSLSWEAATLLKPDMSKGGGMDPAGYVKVKCIACGSRIESVVVKGVVCKKNVAHRRMTSKVDKPRLLILGGALEYQRVTNLLSSVDTLLQQEMDHLKMAVAKIASHQPNILLVEKSVSRYAQEYLLAKDISLVLNVKRPLLERVARCTGTQIVPSIDHLSSQKLGYCETFHVEKFLEDLNSAGQGGKKTMKTLMFFEGCPKPLGFTILLKGADKDELKKVKHVVQYGVFAAYHLALETSFLADEGVSLPEIPLNSLALPDKSSSIQRSISTVPGFGIADNEKPQGLEPYTEPQRTKSLTAADLASSTCGTGPCLSNGASQSMALGSSLNYSTALYSSIVASGNSIPESHHNKLLSCTSRDTNEMNSKQTVVEETSRVDNTLVVGDDPTVEDPGSSEKLYQGMSADTPQNGDSKISKNQLSGSGSLSPKDVQNHPENLEITNEEPVPEKEEFPPSPSDHQSILVSLSSRCVWKGTVCERSHLFRIKYYGSFDKPLGRFLRDHLFDQSYRCHSCEMPSEAHVHCYTHRQGTLTISVKKLPEIILPGERDGKIWMWHRCLRCPRINGFPPATQRIIMSDAAWGLSLGKFLELSFSNHAAASRVASCGHSLHRDCLRFYGFGRMVACFRYASIDVHSVYLPPHTLIFDYGNQDWIQQESDEVVNRAELLFSEVLNGLSQIGEQRSNALQVSNGHKSPELRRQVAELEGMLQKEKLEFEETLQKILNQEKRNGQPGIDVLEINRLWRQLLFQSYMWDHRLIYAANLVNSNYESGSSSPISEDKEKPTDENQMSINSIHGDPKLNGSPSHGGGSVVVDGKISHDASHQEIDMVKNKNLEKDDESDLPNSKSINDQSNLLEPELGVGRALSDGPFPVIPSLSETLDAKWTGENHSGYGIQKDNSSVNPDILMADALTTSAQKETYYLGDRTEDQNGSKSFYSSFKGHDNMEDSSNWLGMPFLNFYRQFNRNLFASTQKFDTLVDYNPVYVSSFRKQELQGGARLLLPIGVNDTVIPVYDDEPSSIIAYALMSPEYHFQLNDEGERPREGNEFTSSYFSDSGTLQSFSSVDETAFDSQKSFGSIEEMIFSMSGSRNSSILDPMLYTKAMHARVSFGVDGPLGKVKYSVTCYYAKRFEALRRVCCPSELDYIRSLSRCKKWGAQGGKSNVFFAKTLDDRFIIKQVTKTELESFIKFGPEYFKYLSESIGTGSPTCLAKILGIYQVTSKHLKGGKESRMDVLVMENLLFRRTVTRLYDLKGSSRSRYNADSTGKNKVLLDQNLIEAMPTSPIFVGNKAKRLLERAVWNDTGFLASVAVMDYSLLVGVDEEKHELVIGIIDFMRQYTWDKHLETWVKASGILGGPKNTSPTVISPKQYKKRFRKAMTTYFLMLPDQWSPSIIPSHSQSDFGEDNTQPRTPAE*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
