Glyma06g46540 - SoyBase

SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Warning: Undefined variable $sxsome in /var/www/html/include/SeqFeatClass.php on line 665

Warning: Undefined variable $sstart in /var/www/html/include/SeqFeatClass.php on line 665

Warning: Undefined variable $send in /var/www/html/include/SeqFeatClass.php on line 665

Warning: get_headers(): php_network_getaddresses: getaddrinfo for bar.utoronto.ca failed: Temporary failure in name resolution in /var/www/html/include/SeqFeatClass.php on line 1018

Warning: get_headers(https://bar.utoronto.ca/api/efp_image/efp_soybean/soybean/Absolute/Glyma06g46540): Failed to open stream: php_network_getaddresses: getaddrinfo for bar.utoronto.ca failed: Temporary failure in name resolution in /var/www/html/include/SeqFeatClass.php on line 1018

Warning: Trying to access array offset on false in /var/www/html/include/SeqFeatClass.php on line 1019

Warning: get_headers(): php_network_getaddresses: getaddrinfo for bar.utoronto.ca failed: Temporary failure in name resolution in /var/www/html/include/SeqFeatClass.php on line 1020

Warning: get_headers(https://bar.utoronto.ca/api/efp_image/efp_soybean/soybean_severin/Absolute/Glyma06g46540): Failed to open stream: php_network_getaddresses: getaddrinfo for bar.utoronto.ca failed: Temporary failure in name resolution in /var/www/html/include/SeqFeatClass.php on line 1020

Warning: Trying to access array offset on false in /var/www/html/include/SeqFeatClass.php on line 1021

Deprecated: preg_match(): Passing null to parameter #2 ($subject) of type string is deprecated in /var/www/html/include/SeqFeatClass.php on line 1025

Deprecated: preg_match(): Passing null to parameter #2 ($subject) of type string is deprecated in /var/www/html/include/SeqFeatClass.php on line 1031

Report for Sequence Feature Glyma06g46540

Feature Type:	gene_model
Chromosome:	Gm06
Start:	49127081
stop:	49137652
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma06g46540

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G22010	AT	Annotation by Michelle Graham. TAIR10: replication factor C1 \| chr5:7280632-7287037 REVERSE LENGTH=956	SoyBase	E_val: 0	ISS
GO:0006974	GO-bp	Annotation by Michelle Graham. GO Biological Process: response to DNA damage stimulus	SoyBase	N/A	ISS
GO:0009737	GO-bp	Annotation by Michelle Graham. GO Biological Process: response to abscisic acid stimulus	SoyBase	N/A	ISS
GO:0031935	GO-bp	Annotation by Michelle Graham. GO Biological Process: regulation of chromatin silencing	SoyBase	N/A	ISS
GO:0051570	GO-bp	Annotation by Michelle Graham. GO Biological Process: regulation of histone H3-K9 methylation	SoyBase	N/A	ISS
GO:0005622	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: intracellular	SoyBase	N/A	ISS
GO:0005634	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: nucleus	SoyBase	N/A	ISS
GO:0005663	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: DNA replication factor C complex	SoyBase	N/A	ISS
GO:0000166	GO-mf	Annotation by Michelle Graham. GO Molecular Function: nucleotide binding	SoyBase	N/A	ISS
GO:0003677	GO-mf	Annotation by Michelle Graham. GO Molecular Function: DNA binding	SoyBase	N/A	ISS
GO:0003689	GO-mf	Annotation by Michelle Graham. GO Molecular Function: DNA clamp loader activity	SoyBase	N/A	ISS
GO:0005524	GO-mf	Annotation by Michelle Graham. GO Molecular Function: ATP binding	SoyBase	N/A	ISS
GO:0017111	GO-mf	Annotation by Michelle Graham. GO Molecular Function: nucleoside-triphosphatase activity	SoyBase	N/A	ISS
KOG1968	KOG	Replication factor C, subunit RFC1 (large subunit)	JGI		ISS
PTHR23389	Panther	CHROMOSOME TRANSMISSION FIDELITY FACTOR 18	JGI		ISS
PF00004	PFAM	ATPase family associated with various cellular activities (AAA)	JGI		ISS
PF00533	PFAM	BRCA1 C Terminus (BRCT) domain	JGI		ISS
PF08519	PFAM	Replication factor RFC1 C terminal domain	JGI		ISS
UniRef100_D7M0S7	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: AAA-type ATPase family protein n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7M0S7_ARALL	SoyBase	E_val: 0	ISS
UniRef100_I1KFH0	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1KFH0_SOYBN	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma06g46540

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma06g46540 not represented in the dataset	Glyma06g46540 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Paralogs of Glyma06g46540

Paralog	Evidence	Comments
Glyma12g10230	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.

Gene model name correspondences to Glyma06g46540 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.06g308700	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma06g46540

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Transcripts of Glyma06g46540

Limit To All Plant Sequences

>Glyma06g46540.2   sequence type=transcript   gene model=Glyma06g46540   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
AAGCAAGTCGATCATATACGATTTTCCAGTGTTCCTTTCAAAGCAAACTGAATTTAGTAATTAATTAATTAATAATAGAGGTTTTCGGTCACAACACAACACACACTCGTTCAGCTTGTTGGAGCAGAGTTTCTCTGTTCTCCCGCCTCAACGCAAAAATGAGTGATATAAGGAAGTGGTTCATGAAAACACATGACAAGGGCAACAATGCCGCTTCTTCCAAGCCTTCTTCCGATAAACCCCAGTCCGAGAAAACGGTGGCTGGAGGTCAGGAAAGTTCAGGGAGGAGGATAACTAGCAAATATTTTAATTCGAACAAGCAAAAGGGGAAAGATGAGAAAGAAAAGCAGGAGCTCCCTGCTAAAAGAAAGAATGCGAAGGACAGTGAGGAAATTCATGAAGACGATGGAGATGACTCTGTCTTGCCCACTAATAAAAAGAAGTTAGCTGACACCACTCCAACAAAAAAATTGAAGAGTGGATCAGGTAGGGGGATTCCAAAGAAATCTGCAGTTTTGGAAGAAAGTGATGAAGATGATGACAAAGATGCTGTGTCTGCTGCTAAATCTGCTGGAAGGGGTGGTGGTGGTGGTGGAAGAGGAGCACCGGGGCGATCAACTGGTGGGAGAGGTAGAGGGGGTGGTAGGGGTGGATTCATGAATTTTGGAGAAAGAAAAGATCCTCCACACAAAGGAGAAAAGGAAGTCCCTGAAGGTGCTCCTGACTGTTTAGCTGGCTTGACTTTTGTGATCAGTGGAACACTGGACAGTTTGGAACGAGAAGAAGCAGAAGATTTGATTAAACGCCATGGTGGCCGTGTCACTGGATCAGTCAGCAAGAAAACGAATTATCTGTTATGTGACGAAGATATTGGGGGACGGAAGTCTGAAAAAGCCAAAGAGCTAGGAACTTCCTTCCTCACAGAGGATGGATTGTTTGATATGATTCGTGCCTCAAAACCTGCAAAAGCTTCTTCACAAGAAGACAAGAAACTTGTGAACAAGGCTGTTGCAGTAGCATCCCAGTCAAAAGTTTCTCCGAAATCACAAGTTAAGGTCCCTCTGTCTTCACGCTCACCTTCTAAACAAGCCAAGCCGAAAACTGCTACTACTGTTCAGTCTTCTTCGATGTGGACAGAAAAATATCGACCTAAAGATCCAAAGGATATCATAGGGAATCAGTCACTTGTTTTACAGCTTCGTAATTGGTTGAAAGCTTGGAATGAGCATTTTTTGGACACTGGTAACAAAAAGCAGGGAAAAAAGCAAAATGACTCTGGTTTGAAAAAAGCTGTCTTGTTAAGTGGAACTCCTGGTATAGGAAAAACAACTTCAGCAAAGTTGGTCTGCCAGGAGCTTGGTTTCCAAGCCATAGAGGTAAATGCTAGTGACAGCCGTGGAAAAGCTGATAGCAAAATTGAAAAAGGAATTAGTGGAAGCAAAACAAATTCCGTTAAGGAACTTGTAACCAACGAGGCCATTGGTGTTAATATGGAACGGTCAAAGCATTACAAATCTGTGCTTATTATGGATGAGGTTGATGGGATGTCAGCTGGTGACAGGGGTGGTGTTGCTGATCTTATTGCTAGCATCAAGATATCAAAAATTCCTATTATCTGCATTTGCAATGACCGTTACAGCCAGAAACTGAAAAGCCTTGTGAACTACTGTTTGCTTCTAAGTTTTCGGAAGCCTACAAAGCAACAGATGGCAAAGAGGTTGATGGATGTTTCAAAGGCTGAAAGACTTCAAGTTAACGAGATTGCACTTGAGGAACTAGCAGAAAGAGTTAATGGAGATATGCGAATGGCACTAAACCAGTTACAGTATATGAGCCTCTCTATGTCAGTTATCAACTATGATGATATTAGGCAGCGCTTTCTTACCAATGCAAAAGATGAAGACATTTCACCATTCACAGCTGTTGATAAGCTTTTTGGTTTTAATGCTGGGAAGTTGAAAATGGATGAGAGGATAAATCTCAGCATGAGTGATCCTGATCTTGTTCCTCTTATTATCCAGGAAAATTATATTAATTATAGACCAAGCTTGGCTGGTAAGGATGATAGTGGCATAAAACGCATGAACCTGATTGCCCGTGCTGCTGAGTCTATTGCTGATGGGGATATAGTGAATGTACAGATTCGCAGATATAGACAGTGGCAGCTCTCTCAAACTAGTTCCCTTGCTACAAGCATAATTCCTGCATCATTGTTACATGGGCAAAGGGAAATACTTGAACAGGGAGAACGAAATTTCAACCGGTTTGGTGGGTGGCTGGGAAAGAACTCAACAATGGGAAAAAACCTAAGGCTTTTGGATGATCTTCATGTTCACATTCTTGCTTCTCGTGAATCTAGTTCGGGAAGGGATACCATTCGCATGGAATACCTTACTCTTCTTCTTAAAGAAATGACAGAGCCCCTGCGAACCCTGCCTAAGGTTGGTTGAAGTACACGTGTTCTTTAGTTTTAAACATACCAAATGTTTAAAGCTGAAATGCTGAACTTGATTGAATCTCATTGCCCTTTTTGAAATGATCAGGCTGAAGCAGTTCAGCAAGTTGTGGAATTGATGAATACATACTCTATCAGTCAAGAAGATTTTGATACTATAGTAGAGTTATCAAAATTCAAGGTTCCTTGACTATATTATTTTTATGTTGTGTTTACTACAAACTGTTCTCAAAGTGTGGTTAATTTTTTGATATTATATGAATCAGGGTCATCCTAATCCACTAGATGGCATACAGCCTGCCGTTAAGTCAGCCTTGACAAAAGCATACAAAGAGCAAAGCTCATCTCGGGTTGTTCGAGTTGCAGATCTAATCACTCTTCCAGGGGTAAAAAAGGTCCCTAAGAAGCGTATTGCTGCTATTCTGGAACCAGCTGGTGAAGAAGTGGAAAAAGGTGAAGGTGACACCTTAGACGAGAGCGAAGAAGAGAACAGCTCTGATAATGAAGAGTTGGGTAAGTTATGTGGTTTTAATTATTATTCTTTTATATTAATTGATTGCTTTTACAATTTT

>Glyma06g46540.3   sequence type=transcript   gene model=Glyma06g46540   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
AAGCAAGTCGATCATATACGATTTTCCAGTGTTCCTTTCAAAGCAAACTGAATTTAGTAATTAATTAATTAATAATAGAGGTTTTCGGTCACAACACAACACACACTCGTTCAGCTTGTTGGAGCAGAGTTTCTCTGTTCTCCCGCCTCAACGCAAAAATGAGTGATATAAGGAAGTGGTTCATGAAAACACATGACAAGGGCAACAATGCCGCTTCTTCCAAGCCTTCTTCCGATAAACCCCAGTCCGAGAAAACGGTGGCTGGAGGTCAGGAAAGTTCAGGGAGGAGGATAACTAGCAAATATTTTAATTCGAACAAGCAAAAGGGGAAAGATGAGAAAGAAAAGCAGGAGCTCCCTGCTAAAAGAAAGAATGCGAAGGACAGTGAGGAAATTCATGAAGACGATGGAGATGACTCTGTCTTGCCCACTAATAAAAAGAAGTTAGCTGACACCACTCCAACAAAAAAATTGAAGAGTGGATCAGGTAGGGGGATTCCAAAGAAATCTGCAGTTTTGGAAGAAAGTGATGAAGATGATGACAAAGATGCTGTGTCTGCTGCTAAATCTGCTGGAAGGGGTGGTGGTGGTGGTGGAAGAGGAGCACCGGGGCGATCAACTGGTGGGAGAGGTAGAGGGGGTGGTAGGGGTGGATTCATGAATTTTGGAGAAAGAAAAGATCCTCCACACAAAGGAGAAAAGGAAGTCCCTGAAGGTGCTCCTGACTGTTTAGCTGGCTTGACTTTTGTGATCAGTGGAACACTGGACAGTTTGGAACGAGAAGAAGCAGAAGATTTGATTAAACGCCATGGTGGCCGTGTCACTGGATCAGTCAGCAAGAAAACGAATTATCTGTTATGTGACGAAGATATTGGGGGACGGAAGTCTGAAAAAGCCAAAGAGCTAGGAACTTCCTTCCTCACAGAGGATGGATTGTTTGATATGATTCGTGCCTCAAAACCTGCAAAAGCTTCTTCACAAGAAGACAAGAAACTTGTGAACAAGGCTGTTGCAGTAGCATCCCAGTCAAAAGTTTCTCCGAAATCACAAGTTAAGGTCCCTCTGTCTTCACGCTCACCTTCTAAACAAGCCAAGCCGAAAACTGCTACTACTGTTCAGTCTTCTTCGATGTGGACAGAAAAATATCGACCTAAAGATCCAAAGGATATCATAGGGAATCAGTCACTTGTTTTACAGCTTCGTAATTGGTTGAAAGCTTGGAATGAGCATTTTTTGGACACTGGTAACAAAAAGCAGGGAAAAAAGCAAAATGACTCTGGTTTGAAAAAAGCTGTCTTGTTAAGTGGAACTCCTGGTATAGGAAAAACAACTTCAGCAAAGTTGGTCTGCCAGGAGCTTGGTTTCCAAGCCATAGAGGTAAATGCTAGTGACAGCCGTGGAAAAGCTGATAGCAAAATTGAAAAAGGAATTAGTGGAAGCAAAACAAATTCCGTTAAGGAACTTGTAACCAACGAGGCCATTGGTGTTAATATGGAACGGTCAAAGCATTACAAATCTGTGCTTATTATGGATGAGGTTGATGGGATGTCAGCTGGTGACAGGGGTGGTGTTGCTGATCTTATTGCTAGCATCAAGATATCAAAAATTCCTATTATCTGCATTTGCAATGACCGTTACAGCCAGAAACTGAAAAGCCTTGTGAACTACTGTTTGCTTCTAAGTTTTCGGAAGCCTACAAAGCAACAGATGGCAAAGAGGTTGATGGATGTTTCAAAGGCTGAAAGACTTCAAGTTAACGAGATTGCACTTGAGGAACTAGCAGAAAGAGTTAATGGAGATATGCGAATGGCACTAAACCAGTTACAGTATATGAGCCTCTCTATGTCAGTTATCAACTATGATGATATTAGGCAGCGCTTTCTTACCAATGCAAAAGATGAAGACATTTCACCATTCACAGCTGTTGATAAGCTTTTTGGTTTTAATGCTGGGAAGTTGAAAATGGATGAGAGGATAAATCTCAGCATGAGTGATCCTGATCTTGTTCCTCTTATTATCCAGGAAAATTATATTAATTATAGACCAAGCTTGGCTGGTAAGGATGATAGTGGCATAAAACGCATGAACCTGATTGCCCGTGCTGCTGAGTCTATTGCTGATGGGGATATAGTGAATGTACAGATTCGCAGATATAGACAGTGGCAGCTCTCTCAAACTAGTTCCCTTGCTACAAGCATAATTCCTGCATCATTGTTACATGGGCAAAGGGAAATACTTGAACAGGGAGAACGAAATTTCAACCGGTTTGGTGGGTGGCTGGGAAAGAACTCAACAATGGGAAAAAACCTAAGGCTTTTGGATGATCTTCATGTTCACATTCTTGCTTCTCGTGAATCTAGTTCGGGAAGGGATACCATTCGCATGGAATACCTTACTCTTCTTCTTAAAGAAATGACAGAGCCCCTGCGAACCCTGCCTAAGGCTGAAGCAGTTCAGCAAGTTGTGGAATTGATGAATACATACTCTATCAGTCAAGAAGATTTTGATACTATAGTAGAGTTATCAAAATTCAAGGGTCATCCTAATCCACTAGATGGCATACAGCCTGCCGTTAAGTCAGCCTTGACAAAAGCATACAAAGAGCAAAGCTCATCTCGGGTTGTTCGAGTTGCAGATCTAATCACTCTTCCAGGGGTAAAAAAGGTCCCTAAGAAGCGTATTGCTGCTATTCTGGAACCAGCTGGTGAAGAAGTGGAAAAAGGTGAAGGTGACACCTTAGACGAGAGCGAAGAAGAGAACAGCTCTGATAATGAAGAGTTGGAGGGCACCAAGGGTGAGAAGCTGCAATCAGAACTTCAAAGCTATAATTCAAAGGCCACGCAAATTCAGTTGGAACTGAAGGGAACGGGAAATTCAAGTTCCAAGAAGACATCGGGTGGTAGAGGTAAAGGTGCTTCTGCATCTGGGAAGAAGGTTGCTCAAGCTCCAAAGACTACTGCAAAAAGAAAATGGTGAAGAAATATTAAACAATGTGCCTTTCTCCGGAACCACTATTTGGAGGAATTGTATAGAACCCCGCTCTTTACGTAATTGTGCCTTCACAAATTTTAGGGTTGACTTTAGTAAATTTTCCAAGGAGGACATGGATGATTACTTATGGTGGCCCTCTGTTTTTTGAATTTAGATGATGTGTCTACGTTAGGAATTAGAACTTTGCATGCTATGTTTTGAAGAATTCCTGGATTGAGTTGTTACTCCTTTATTCCCTGATATTCTGCAAGGATATGATGCTGCCTGGATGAGTAATGTTGCATACTCAAAAGGGGGGAAATTGAATGAATTGATTGTAAATAAGTGAAAGATTTTACAATTTTTTCTTTTTTGAGGAAATGTTTAATTGTAGCAAAAATGAAATTTAAAAAATAGTCTATTGATAACAAATGTAATTTTATAAT

Coding sequences of Glyma06g46540

Limit To All Plant Sequences

>Glyma06g46540.1   sequence type=CDS   gene model=Glyma06g46540   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAGTGATATAAGGAAGTGGTTCATGAAAACACATGACAAGGGCAACAATGCCGCTTCTTCCAAGCCTTCTTCCGATAAACCCCAGTCCGAGAAAACGGTGGCTTTTGCTGTGGCTGGAGGTCAGGAAAGTTCAGGGAGGAGGATAACTAGCAAATATTTTAATTCGAACAAGCAAAAGGGGAAAGATGAGAAAGAAAAGCAGGAGCTCCCTGCTAAAAGAAAGAATGCGAAGGACAGTGAGGAAATTCATGAAGACGATGGAGATGACTCTGTCTTGCCCACTAATAAAAAGAAGTTAGCTGACACCACTCCAACAAAAAAATTGAAGAGTGGATCAGGTAGGGGGATTCCAAAGAAATCTGCAGTTTTGGAAGAAAGTGATGAAGATGATGACAAAGATGCTGTGTCTGCTGCTAAATCTGCTGGAAGGGGTGGTGGTGGTGGTGGAAGAGGAGCACCGGGGCGATCAACTGGTGGGAGAGGTAGAGGGGGTGGTAGGGGTGGATTCATGAATTTTGGAGAAAGAAAAGATCCTCCACACAAAGGAGAAAAGGAAGTCCCTGAAGGTGCTCCTGACTGTTTAGCTGGCTTGACTTTTGTGATCAGTGGAACACTGGACAGTTTGGAACGAGAAGAAGCAGAAGATTTGATTAAACGCCATGGTGGCCGTGTCACTGGATCAGTCAGCAAGAAAACGAATTATCTGTTATGTGACGAAGATATTGGGGGACGGAAGTCTGAAAAAGCCAAAGAGCTAGGAACTTCCTTCCTCACAGAGGATGGATTGTTTGATATGATTCGTGCCTCAAAACCTGCAAAAGCTTCTTCACAAGAAGACAAGAAACTTGTGAACAAGGCTGTTGCAGTAGCATCCCAGTCAAAAGTTTCTCCGAAATCACAAGTTAAGGTCCCTCTGTCTTCACGCTCACCTTCTAAACAAGCCAAGCCGAAAACTGCTACTACTGTTCAGTCTTCTTCGATGTGGACAGAAAAATATCGACCTAAAGATCCAAAGGATATCATAGGGAATCAGTCACTTGTTTTACAGCTTCGTAATTGGTTGAAAGCTTGGAATGAGCATTTTTTGGACACTGGTAACAAAAAGCAGGGAAAAAAGCAAAATGACTCTGGTTTGAAAAAAGCTGTCTTGTTAAGTGGAACTCCTGGTATAGGAAAAACAACTTCAGCAAAGTTGGTCTGCCAGGAGCTTGGTTTCCAAGCCATAGAGGTAAATGCTAGTGACAGCCGTGGAAAAGCTGATAGCAAAATTGAAAAAGGAATTAGTGGAAGCAAAACAAATTCCGTTAAGGAACTTGTAACCAACGAGGCCATTGGTGTTAATATGGAACGGTCAAAGCATTACAAATCTGTGCTTATTATGGATGAGGTTGATGGGATGTCAGCTGGTGACAGGGGTGGTGTTGCTGATCTTATTGCTAGCATCAAGATATCAAAAATTCCTATTATCTGCATTTGCAATGACCGTTACAGCCAGAAACTGAAAAGCCTTGTGAACTACTGTTTGCTTCTAAGTTTTCGGAAGCCTACAAAGCAACAGATGGCAAAGAGGTTGATGGATGTTTCAAAGGCTGAAAGACTTCAAGTTAACGAGATTGCACTTGAGGAACTAGCAGAAAGAGTTAATGGAGATATGCGAATGGCACTAAACCAGTTACAGTATATGAGCCTCTCTATGTCAGTTATCAACTATGATGATATTAGGCAGCGCTTTCTTACCAATGCAAAAGATGAAGACATTTCACCATTCACAGCTGTTGATAAGCTTTTTGGTTTTAATGCTGGGAAGTTGAAAATGGATGAGAGGATAAATCTCAGCATGAGTGATCCTGATCTTGTTCCTCTTATTATCCAGGAAAATTATATTAATTATAGACCAAGCTTGGCTGGTAAGGATGATAGTGGCATAAAACGCATGAACCTGATTGCCCGTGCTGCTGAGTCTATTGCTGATGGGGATATAGTGAATGTACAGATTCGCAGATATAGACAGTGGCAGCTCTCTCAAACTAGTTCCCTTGCTACAAGCATAATTCCTGCATCATTGTTACATGGGCAAAGGGAAATACTTGAACAGGGAGAACGAAATTTCAACCGGTTTGGTGGGTGGCTGGGAAAGAACTCAACAATGGGAAAAAACCTAAGGCTTTTGGATGATCTTCATGTTCACATTCTTGCTTCTCGTGAATCTAGTTCGGGAAGGGATACCATTCGCATGGAATACCTTACTCTTCTTCTTAAAGAAATGACAGAGCCCCTGCGAACCCTGCCTAAGGCTGAAGCAGTTCAGCAAGTTGTGGAATTGATGAATACATACTCTATCAGTCAAGAAGATTTTGATACTATAGTAGAGTTATCAAAATTCAAGGGTCATCCTAATCCACTAGATGGCATACAGCCTGCCGTTAAGTCAGCCTTGACAAAAGCATACAAAGAGCAAAGCTCATCTCGGGTTGTTCGAGTTGCAGATCTAATCACTCTTCCAGGGGTAAAAAAGGTCCCTAAGAAGCGTATTGCTGCTATTCTGGAACCAGCTGGTGAAGAAGTGGAAAAAGGTGAAGGTGACACCTTAGACGAGAGCGAAGAAGAGAACAGCTCTGATAATGAAGAGTTGGAGGGCACCAAGGGTGAGAAGCTGCAATCAGAACTTCAAAGCTATAATTCAAAGGCCACGCAAATTCAGTTGGAACTGAAGGGAACGGGAAATTCAAGTTCCAAGAAGACATCGGGTGGTAGAGGTAAAGGTGCTTCTGCATCTGGGAAGAAGGTTGCTCAAGCTCCAAAGACTACTGCAAAAAGAAAATGGTGA

>Glyma06g46540.2   sequence type=CDS   gene model=Glyma06g46540   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAGTGATATAAGGAAGTGGTTCATGAAAACACATGACAAGGGCAACAATGCCGCTTCTTCCAAGCCTTCTTCCGATAAACCCCAGTCCGAGAAAACGGTGGCTGGAGGTCAGGAAAGTTCAGGGAGGAGGATAACTAGCAAATATTTTAATTCGAACAAGCAAAAGGGGAAAGATGAGAAAGAAAAGCAGGAGCTCCCTGCTAAAAGAAAGAATGCGAAGGACAGTGAGGAAATTCATGAAGACGATGGAGATGACTCTGTCTTGCCCACTAATAAAAAGAAGTTAGCTGACACCACTCCAACAAAAAAATTGAAGAGTGGATCAGGTAGGGGGATTCCAAAGAAATCTGCAGTTTTGGAAGAAAGTGATGAAGATGATGACAAAGATGCTGTGTCTGCTGCTAAATCTGCTGGAAGGGGTGGTGGTGGTGGTGGAAGAGGAGCACCGGGGCGATCAACTGGTGGGAGAGGTAGAGGGGGTGGTAGGGGTGGATTCATGAATTTTGGAGAAAGAAAAGATCCTCCACACAAAGGAGAAAAGGAAGTCCCTGAAGGTGCTCCTGACTGTTTAGCTGGCTTGACTTTTGTGATCAGTGGAACACTGGACAGTTTGGAACGAGAAGAAGCAGAAGATTTGATTAAACGCCATGGTGGCCGTGTCACTGGATCAGTCAGCAAGAAAACGAATTATCTGTTATGTGACGAAGATATTGGGGGACGGAAGTCTGAAAAAGCCAAAGAGCTAGGAACTTCCTTCCTCACAGAGGATGGATTGTTTGATATGATTCGTGCCTCAAAACCTGCAAAAGCTTCTTCACAAGAAGACAAGAAACTTGTGAACAAGGCTGTTGCAGTAGCATCCCAGTCAAAAGTTTCTCCGAAATCACAAGTTAAGGTCCCTCTGTCTTCACGCTCACCTTCTAAACAAGCCAAGCCGAAAACTGCTACTACTGTTCAGTCTTCTTCGATGTGGACAGAAAAATATCGACCTAAAGATCCAAAGGATATCATAGGGAATCAGTCACTTGTTTTACAGCTTCGTAATTGGTTGAAAGCTTGGAATGAGCATTTTTTGGACACTGGTAACAAAAAGCAGGGAAAAAAGCAAAATGACTCTGGTTTGAAAAAAGCTGTCTTGTTAAGTGGAACTCCTGGTATAGGAAAAACAACTTCAGCAAAGTTGGTCTGCCAGGAGCTTGGTTTCCAAGCCATAGAGGTAAATGCTAGTGACAGCCGTGGAAAAGCTGATAGCAAAATTGAAAAAGGAATTAGTGGAAGCAAAACAAATTCCGTTAAGGAACTTGTAACCAACGAGGCCATTGGTGTTAATATGGAACGGTCAAAGCATTACAAATCTGTGCTTATTATGGATGAGGTTGATGGGATGTCAGCTGGTGACAGGGGTGGTGTTGCTGATCTTATTGCTAGCATCAAGATATCAAAAATTCCTATTATCTGCATTTGCAATGACCGTTACAGCCAGAAACTGAAAAGCCTTGTGAACTACTGTTTGCTTCTAAGTTTTCGGAAGCCTACAAAGCAACAGATGGCAAAGAGGTTGATGGATGTTTCAAAGGCTGAAAGACTTCAAGTTAACGAGATTGCACTTGAGGAACTAGCAGAAAGAGTTAATGGAGATATGCGAATGGCACTAAACCAGTTACAGTATATGAGCCTCTCTATGTCAGTTATCAACTATGATGATATTAGGCAGCGCTTTCTTACCAATGCAAAAGATGAAGACATTTCACCATTCACAGCTGTTGATAAGCTTTTTGGTTTTAATGCTGGGAAGTTGAAAATGGATGAGAGGATAAATCTCAGCATGAGTGATCCTGATCTTGTTCCTCTTATTATCCAGGAAAATTATATTAATTATAGACCAAGCTTGGCTGGTAAGGATGATAGTGGCATAAAACGCATGAACCTGATTGCCCGTGCTGCTGAGTCTATTGCTGATGGGGATATAGTGAATGTACAGATTCGCAGATATAGACAGTGGCAGCTCTCTCAAACTAGTTCCCTTGCTACAAGCATAATTCCTGCATCATTGTTACATGGGCAAAGGGAAATACTTGAACAGGGAGAACGAAATTTCAACCGGTTTGGTGGGTGGCTGGGAAAGAACTCAACAATGGGAAAAAACCTAAGGCTTTTGGATGATCTTCATGTTCACATTCTTGCTTCTCGTGAATCTAGTTCGGGAAGGGATACCATTCGCATGGAATACCTTACTCTTCTTCTTAAAGAAATGACAGAGCCCCTGCGAACCCTGCCTAAGGTTGGTTGA

>Glyma06g46540.3   sequence type=CDS   gene model=Glyma06g46540   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAGTGATATAAGGAAGTGGTTCATGAAAACACATGACAAGGGCAACAATGCCGCTTCTTCCAAGCCTTCTTCCGATAAACCCCAGTCCGAGAAAACGGTGGCTGGAGGTCAGGAAAGTTCAGGGAGGAGGATAACTAGCAAATATTTTAATTCGAACAAGCAAAAGGGGAAAGATGAGAAAGAAAAGCAGGAGCTCCCTGCTAAAAGAAAGAATGCGAAGGACAGTGAGGAAATTCATGAAGACGATGGAGATGACTCTGTCTTGCCCACTAATAAAAAGAAGTTAGCTGACACCACTCCAACAAAAAAATTGAAGAGTGGATCAGGTAGGGGGATTCCAAAGAAATCTGCAGTTTTGGAAGAAAGTGATGAAGATGATGACAAAGATGCTGTGTCTGCTGCTAAATCTGCTGGAAGGGGTGGTGGTGGTGGTGGAAGAGGAGCACCGGGGCGATCAACTGGTGGGAGAGGTAGAGGGGGTGGTAGGGGTGGATTCATGAATTTTGGAGAAAGAAAAGATCCTCCACACAAAGGAGAAAAGGAAGTCCCTGAAGGTGCTCCTGACTGTTTAGCTGGCTTGACTTTTGTGATCAGTGGAACACTGGACAGTTTGGAACGAGAAGAAGCAGAAGATTTGATTAAACGCCATGGTGGCCGTGTCACTGGATCAGTCAGCAAGAAAACGAATTATCTGTTATGTGACGAAGATATTGGGGGACGGAAGTCTGAAAAAGCCAAAGAGCTAGGAACTTCCTTCCTCACAGAGGATGGATTGTTTGATATGATTCGTGCCTCAAAACCTGCAAAAGCTTCTTCACAAGAAGACAAGAAACTTGTGAACAAGGCTGTTGCAGTAGCATCCCAGTCAAAAGTTTCTCCGAAATCACAAGTTAAGGTCCCTCTGTCTTCACGCTCACCTTCTAAACAAGCCAAGCCGAAAACTGCTACTACTGTTCAGTCTTCTTCGATGTGGACAGAAAAATATCGACCTAAAGATCCAAAGGATATCATAGGGAATCAGTCACTTGTTTTACAGCTTCGTAATTGGTTGAAAGCTTGGAATGAGCATTTTTTGGACACTGGTAACAAAAAGCAGGGAAAAAAGCAAAATGACTCTGGTTTGAAAAAAGCTGTCTTGTTAAGTGGAACTCCTGGTATAGGAAAAACAACTTCAGCAAAGTTGGTCTGCCAGGAGCTTGGTTTCCAAGCCATAGAGGTAAATGCTAGTGACAGCCGTGGAAAAGCTGATAGCAAAATTGAAAAAGGAATTAGTGGAAGCAAAACAAATTCCGTTAAGGAACTTGTAACCAACGAGGCCATTGGTGTTAATATGGAACGGTCAAAGCATTACAAATCTGTGCTTATTATGGATGAGGTTGATGGGATGTCAGCTGGTGACAGGGGTGGTGTTGCTGATCTTATTGCTAGCATCAAGATATCAAAAATTCCTATTATCTGCATTTGCAATGACCGTTACAGCCAGAAACTGAAAAGCCTTGTGAACTACTGTTTGCTTCTAAGTTTTCGGAAGCCTACAAAGCAACAGATGGCAAAGAGGTTGATGGATGTTTCAAAGGCTGAAAGACTTCAAGTTAACGAGATTGCACTTGAGGAACTAGCAGAAAGAGTTAATGGAGATATGCGAATGGCACTAAACCAGTTACAGTATATGAGCCTCTCTATGTCAGTTATCAACTATGATGATATTAGGCAGCGCTTTCTTACCAATGCAAAAGATGAAGACATTTCACCATTCACAGCTGTTGATAAGCTTTTTGGTTTTAATGCTGGGAAGTTGAAAATGGATGAGAGGATAAATCTCAGCATGAGTGATCCTGATCTTGTTCCTCTTATTATCCAGGAAAATTATATTAATTATAGACCAAGCTTGGCTGGTAAGGATGATAGTGGCATAAAACGCATGAACCTGATTGCCCGTGCTGCTGAGTCTATTGCTGATGGGGATATAGTGAATGTACAGATTCGCAGATATAGACAGTGGCAGCTCTCTCAAACTAGTTCCCTTGCTACAAGCATAATTCCTGCATCATTGTTACATGGGCAAAGGGAAATACTTGAACAGGGAGAACGAAATTTCAACCGGTTTGGTGGGTGGCTGGGAAAGAACTCAACAATGGGAAAAAACCTAAGGCTTTTGGATGATCTTCATGTTCACATTCTTGCTTCTCGTGAATCTAGTTCGGGAAGGGATACCATTCGCATGGAATACCTTACTCTTCTTCTTAAAGAAATGACAGAGCCCCTGCGAACCCTGCCTAAGGCTGAAGCAGTTCAGCAAGTTGTGGAATTGATGAATACATACTCTATCAGTCAAGAAGATTTTGATACTATAGTAGAGTTATCAAAATTCAAGGGTCATCCTAATCCACTAGATGGCATACAGCCTGCCGTTAAGTCAGCCTTGACAAAAGCATACAAAGAGCAAAGCTCATCTCGGGTTGTTCGAGTTGCAGATCTAATCACTCTTCCAGGGGTAAAAAAGGTCCCTAAGAAGCGTATTGCTGCTATTCTGGAACCAGCTGGTGAAGAAGTGGAAAAAGGTGAAGGTGACACCTTAGACGAGAGCGAAGAAGAGAACAGCTCTGATAATGAAGAGTTGGAGGGCACCAAGGGTGAGAAGCTGCAATCAGAACTTCAAAGCTATAATTCAAAGGCCACGCAAATTCAGTTGGAACTGAAGGGAACGGGAAATTCAAGTTCCAAGAAGACATCGGGTGGTAGAGGTAAAGGTGCTTCTGCATCTGGGAAGAAGGTTGCTCAAGCTCCAAAGACTACTGCAAAAAGAAAATGGTGA

Predicted protein sequences of Glyma06g46540

Limit To All Plant Sequences

>Glyma06g46540.1   sequence type=predicted peptide   gene model=Glyma06g46540   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MSDIRKWFMKTHDKGNNAASSKPSSDKPQSEKTVAFAVAGGQESSGRRITSKYFNSNKQKGKDEKEKQELPAKRKNAKDSEEIHEDDGDDSVLPTNKKKLADTTPTKKLKSGSGRGIPKKSAVLEESDEDDDKDAVSAAKSAGRGGGGGGRGAPGRSTGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTNYLLCDEDIGGRKSEKAKELGTSFLTEDGLFDMIRASKPAKASSQEDKKLVNKAVAVASQSKVSPKSQVKVPLSSRSPSKQAKPKTATTVQSSSMWTEKYRPKDPKDIIGNQSLVLQLRNWLKAWNEHFLDTGNKKQGKKQNDSGLKKAVLLSGTPGIGKTTSAKLVCQELGFQAIEVNASDSRGKADSKIEKGISGSKTNSVKELVTNEAIGVNMERSKHYKSVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSFRKPTKQQMAKRLMDVSKAERLQVNEIALEELAERVNGDMRMALNQLQYMSLSMSVINYDDIRQRFLTNAKDEDISPFTAVDKLFGFNAGKLKMDERINLSMSDPDLVPLIIQENYINYRPSLAGKDDSGIKRMNLIARAAESIADGDIVNVQIRRYRQWQLSQTSSLATSIIPASLLHGQREILEQGERNFNRFGGWLGKNSTMGKNLRLLDDLHVHILASRESSSGRDTIRMEYLTLLLKEMTEPLRTLPKAEAVQQVVELMNTYSISQEDFDTIVELSKFKGHPNPLDGIQPAVKSALTKAYKEQSSSRVVRVADLITLPGVKKVPKKRIAAILEPAGEEVEKGEGDTLDESEEENSSDNEELEGTKGEKLQSELQSYNSKATQIQLELKGTGNSSSKKTSGGRGKGASASGKKVAQAPKTTAKRKW*

>Glyma06g46540.2   sequence type=predicted peptide   gene model=Glyma06g46540   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MSDIRKWFMKTHDKGNNAASSKPSSDKPQSEKTVAGGQESSGRRITSKYFNSNKQKGKDEKEKQELPAKRKNAKDSEEIHEDDGDDSVLPTNKKKLADTTPTKKLKSGSGRGIPKKSAVLEESDEDDDKDAVSAAKSAGRGGGGGGRGAPGRSTGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTNYLLCDEDIGGRKSEKAKELGTSFLTEDGLFDMIRASKPAKASSQEDKKLVNKAVAVASQSKVSPKSQVKVPLSSRSPSKQAKPKTATTVQSSSMWTEKYRPKDPKDIIGNQSLVLQLRNWLKAWNEHFLDTGNKKQGKKQNDSGLKKAVLLSGTPGIGKTTSAKLVCQELGFQAIEVNASDSRGKADSKIEKGISGSKTNSVKELVTNEAIGVNMERSKHYKSVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSFRKPTKQQMAKRLMDVSKAERLQVNEIALEELAERVNGDMRMALNQLQYMSLSMSVINYDDIRQRFLTNAKDEDISPFTAVDKLFGFNAGKLKMDERINLSMSDPDLVPLIIQENYINYRPSLAGKDDSGIKRMNLIARAAESIADGDIVNVQIRRYRQWQLSQTSSLATSIIPASLLHGQREILEQGERNFNRFGGWLGKNSTMGKNLRLLDDLHVHILASRESSSGRDTIRMEYLTLLLKEMTEPLRTLPKVG*

>Glyma06g46540.3   sequence type=predicted peptide   gene model=Glyma06g46540   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MSDIRKWFMKTHDKGNNAASSKPSSDKPQSEKTVAGGQESSGRRITSKYFNSNKQKGKDEKEKQELPAKRKNAKDSEEIHEDDGDDSVLPTNKKKLADTTPTKKLKSGSGRGIPKKSAVLEESDEDDDKDAVSAAKSAGRGGGGGGRGAPGRSTGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTNYLLCDEDIGGRKSEKAKELGTSFLTEDGLFDMIRASKPAKASSQEDKKLVNKAVAVASQSKVSPKSQVKVPLSSRSPSKQAKPKTATTVQSSSMWTEKYRPKDPKDIIGNQSLVLQLRNWLKAWNEHFLDTGNKKQGKKQNDSGLKKAVLLSGTPGIGKTTSAKLVCQELGFQAIEVNASDSRGKADSKIEKGISGSKTNSVKELVTNEAIGVNMERSKHYKSVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSFRKPTKQQMAKRLMDVSKAERLQVNEIALEELAERVNGDMRMALNQLQYMSLSMSVINYDDIRQRFLTNAKDEDISPFTAVDKLFGFNAGKLKMDERINLSMSDPDLVPLIIQENYINYRPSLAGKDDSGIKRMNLIARAAESIADGDIVNVQIRRYRQWQLSQTSSLATSIIPASLLHGQREILEQGERNFNRFGGWLGKNSTMGKNLRLLDDLHVHILASRESSSGRDTIRMEYLTLLLKEMTEPLRTLPKAEAVQQVVELMNTYSISQEDFDTIVELSKFKGHPNPLDGIQPAVKSALTKAYKEQSSSRVVRVADLITLPGVKKVPKKRIAAILEPAGEEVEKGEGDTLDESEEENSSDNEELEGTKGEKLQSELQSYNSKATQIQLELKGTGNSSSKKTSGGRGKGASASGKKVAQAPKTTAKRKW*

Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA

U.S. Public Domain