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Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
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A newer version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT2G32520 | AT | Annotation by Michelle Graham. TAIR10: alpha/beta-Hydrolases superfamily protein | chr2:13805823-13807442 REVERSE LENGTH=239 | SoyBase | E_val: 2.00E-149 | ISS |
| GO:0008152 | GO-bp | Annotation by Michelle Graham. GO Biological Process: metabolic process | SoyBase | N/A | ISS |
| GO:0010043 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to zinc ion | SoyBase | N/A | ISS |
| GO:0005737 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm | SoyBase | N/A | ISS |
| GO:0005829 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cytosol | SoyBase | N/A | ISS |
| GO:0009507 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: chloroplast | SoyBase | N/A | ISS |
| GO:0016747 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring acyl groups other than amino-acyl groups | SoyBase | N/A | ISS |
| GO:0016787 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: hydrolase activity | SoyBase | N/A | ISS |
| KOG3043 | KOG | Predicted hydrolase related to dienelactone hydrolase | JGI | ISS | |
| PTHR17630 | Panther | DIENELACTONE HYDROLASE | JGI | ISS | |
| PTHR17630:SF19 | Panther | ENDO-1,3-1,4-BETA-D-GLUCANASE | JGI | ISS | |
| PF01738 | PFAM | Dienelactone hydrolase family | JGI | ISS | |
| UniRef100_B9SFS0 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Carboxymethylenebutenolidase, putative n=1 Tax=Ricinus communis RepID=B9SFS0_RICCO | SoyBase | E_val: 3.00E-152 | ISS |
| UniRef100_I1KFF8 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Glycine max RepID=I1KFF8_SOYBN | SoyBase | E_val: 0 | ISS |
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Glyma06g46430 not represented in the dataset |
Glyma06g46430 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|---|---|---|
| Glyma.06g307800 | Wm82.a2.v1 | IGC | As supplied by JGI |
| Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma06g46430.2 sequence type=transcript gene model=Glyma06g46430 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATTTGTGTGCATTTCAGCTGTAATGTGGTTTTACGTTGCAGCATAAAGTTGTGATCAAGGTTTTAAATTGCGGTTGTAGTCGCAATTTCGTCACAATCCCTGACATTGCAGGAAATTGTGGAAAATATGGCCAATGTGACACGGCTGAAATCATGGCCATTTTTTGATATCTTGGTTGTGATTTAAGACCAGATTGATGAGATATCATTTTTAGTGATGCTGTTTGATCTGAAGTTTTATTGTGCCATTTTCTATATAGATTTCTATGTTTCTACCTGTAGTGGAACCGGAGAACCTCATTGCTAATTTTCTGTTATGTAATTTCTGTTTTCAATTGATTAGGCATTTGATGCATATGTCGTTGGAAAAAACGACGCTCCTGGAATCGTTGTGCTTCAGGAGTGGTGGGGTGTGGACTTTGAAATTAAAAATCATGCTGTGATGATTTCTCAACTTGGTCGTGGATTTAAAGCTCTTATTCCAGATCTGTACAGAGGAAAGGTTGGTCTAGATGTTGCAGAAGCCCAACATTTGTTTGATGGTCTTGATTGGCAAGGTGCTGTAAAAGATATCAATGCTTCAGTTAACTGGCTTAAGGCAAATGGTTCAAAAAAGGCTGGTGTTACTGGATTTTGTATGGGGGGTGCTCTCGCAATTGCAAGCTCAGTCTTGGTTCCAAATGTTGATGCTACTGTAGCTTTTTATGGAGTTCCTTCTTCTGAGCTTGCAGACCCTGCCCAAGCCAAGGCTCCTGTTCAGGCCCACTTTGGAGAGCTGGATAATTTTGTTGGCTTTTCTGATGTTACGGCTGCCAAGGCCTTAGAGGAGAAGTTGAAGGCATCTGGTGTTCCACATGAGGTACACATATATCCTGGCAATGGACATGCATTCATGAACAGGTCTCCAGAAGGAATCAAGAGGAGGAAGAATATGGGAATGCCCGACGAAGACGAAGCTGCAGTTCAGCTTGCATGGTCTCGCTTCCAGTCATGGATGACACATTACTTATCCAGCTAAATAGTTTCTTAGTAATGCCACAATGGTATGATAACATGATATACTTCTAATTCTGCATTTGATTAGTAGTTTGGTATAACTCTTAATGGCCCCATCAACTCTAAATATGGTGCTTTGTTTCCTTATGGGTGGATACATACACCCTTGAGAAATTTGGCTTGGAAATAATTAGTTTGTCTATAATAAGTAAATATGGTCTTTGTTTATTGGTGTCACTTCTCCATTTTATGTGTGCAAAAACTGACATTTTTTTGTTGAAACGACAATTGAATCAAAGCTGATGATAGGAGGAGTGTTGGACTGGTGTCAATAGTGCTGGAGTAGGTTTGGACATGGTTTAAGTTTTTTATATTTCAACAAATCATCGGATTTATGATTCCATTCA
>Glyma06g46430.1 sequence type=CDS gene model=Glyma06g46430 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGTTGCGGATTGCTCCCAAATTCTTCACCACGGTTCCTCTTCGGACCATTTCACCCTTCGCATGTCGCTTCTCAGTCCGTTCCATCGCTGACTCTTCTCCTTTCAACAAAATCCGCATTCAAAGGGATGATACTGCATTTGATGCATATGTCGTTGGAAAAAACGACGCTCCTGGAATCGTTGTGCTTCAGGAGTGGTGGGGTGTGGACTTTGAAATTAAAAATCATGCTGTGATGATTTCTCAACTTGGTCGTGGATTTAAAGCTCTTATTCCAGATCTGTACAGAGGAAAGGTTGGTCTAGATGTTGCAGAAGCCCAACATTTGTTTGATGGTCTTGATTGGCAAGGTGCTGTAAAAGATATCAATGCTTCAGTTAACTGGCTTAAGGCAAATGGTTCAAAAAAGGCTGGTGTTACTGGATTTTGTATGGGGGGTGCTCTCGCAATTGCAAGCTCAGTCTTGGTTCCAAATGTTGATGCTACTGTAGCTTTTTATGGAGTTCCTTCTTCTGAGCTTGCAGACCCTGCCCAAGCCAAGGCTCCTGTTCAGGCCCACTTTGGAGAGCTGGATAATTTTGTTGGCTTTTCTGATGTTACGGCTGCCAAGGCCTTAGAGGAGAAGTTGAAGGCATCTGGTGTTCCACATGAGGTACACATATATCCTGGCAATGGACATGCATTCATGAACAGGTCTCCAGAAGGAATCAAGAGGAGGAAGAATATGGGAATGCCCGACGAAGACGAAGCTGCAGTTCAGCTTGCATGGTCTCGCTTCCAGTCATGGATGACACATTACTTATCCAGCTAA >Glyma06g46430.2 sequence type=CDS gene model=Glyma06g46430 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGATTTCTCAACTTGGTCGTGGATTTAAAGCTCTTATTCCAGATCTGTACAGAGGAAAGGTTGGTCTAGATGTTGCAGAAGCCCAACATTTGTTTGATGGTCTTGATTGGCAAGGTGCTGTAAAAGATATCAATGCTTCAGTTAACTGGCTTAAGGCAAATGGTTCAAAAAAGGCTGGTGTTACTGGATTTTGTATGGGGGGTGCTCTCGCAATTGCAAGCTCAGTCTTGGTTCCAAATGTTGATGCTACTGTAGCTTTTTATGGAGTTCCTTCTTCTGAGCTTGCAGACCCTGCCCAAGCCAAGGCTCCTGTTCAGGCCCACTTTGGAGAGCTGGATAATTTTGTTGGCTTTTCTGATGTTACGGCTGCCAAGGCCTTAGAGGAGAAGTTGAAGGCATCTGGTGTTCCACATGAGGTACACATATATCCTGGCAATGGACATGCATTCATGAACAGGTCTCCAGAAGGAATCAAGAGGAGGAAGAATATGGGAATGCCCGACGAAGACGAAGCTGCAGTTCAGCTTGCATGGTCTCGCTTCCAGTCATGGATGACACATTACTTATCCAGCTAA
>Glyma06g46430.1 sequence type=predicted peptide gene model=Glyma06g46430 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MLRIAPKFFTTVPLRTISPFACRFSVRSIADSSPFNKIRIQRDDTAFDAYVVGKNDAPGIVVLQEWWGVDFEIKNHAVMISQLGRGFKALIPDLYRGKVGLDVAEAQHLFDGLDWQGAVKDINASVNWLKANGSKKAGVTGFCMGGALAIASSVLVPNVDATVAFYGVPSSELADPAQAKAPVQAHFGELDNFVGFSDVTAAKALEEKLKASGVPHEVHIYPGNGHAFMNRSPEGIKRRKNMGMPDEDEAAVQLAWSRFQSWMTHYLSS* >Glyma06g46430.2 sequence type=predicted peptide gene model=Glyma06g46430 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MISQLGRGFKALIPDLYRGKVGLDVAEAQHLFDGLDWQGAVKDINASVNWLKANGSKKAGVTGFCMGGALAIASSVLVPNVDATVAFYGVPSSELADPAQAKAPVQAHFGELDNFVGFSDVTAAKALEEKLKASGVPHEVHIYPGNGHAFMNRSPEGIKRRKNMGMPDEDEAAVQLAWSRFQSWMTHYLSS*
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||
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