Glyma06g42315 - SoyBase

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Report for Sequence Feature Glyma06g42315

Feature Type:	gene_model
Chromosome:	Gm06
Start:	45563681
stop:	45571475
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma06g42315

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
UniRef100_I1LSZ2	UniRef	Annotation by Michelle Graham. Best UniRef hit: Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Glycine max RepID=I1LSZ2_SOYBN	SoyBase	E_val: 1.00E-08	ISS
UniRef100_I1LSZ2	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Glycine max RepID=I1LSZ2_SOYBN	SoyBase	E_val: 1.00E-08	ISS

Expression Patterns of Glyma06g42315

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma06g42315 not represented in the dataset	Glyma06g42315 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma06g42315 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.06g271300	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma06g42315

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma06g42315

Limit To All Plant Sequences

>Glyma06g42315.1   sequence type=CDS   gene model=Glyma06g42315   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGATTGAAGTGAAGATCTGCAATGTCTACTTTCCTTGCTCTAACAAGACAGCAGGTCTGACCTCATTTCCTGATTACCTTGTGTTACATACATGGAGGGCAGGATCGGTACCCAAAAAGCTTGATGTGTATATTGACGTTGCTGATATCATAGCAAAGGTCACTAGTCTGGGGAAGAGCTGTTACCTGATGGGGTCATGGGTGTATGTGGGAAGTTTTCTGTTCAAATGA

Predicted protein sequences of Glyma06g42315

Limit To All Plant Sequences

>Glyma06g42315.1   sequence type=predicted peptide   gene model=Glyma06g42315   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MIEVKICNVYFPCSNKTAGLTSFPDYLVLHTWRAGSVPKKLDVYIDVADIIAKVTSLGKSCYLMGSWVYVGSFLFK*

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