Glyma06g41510 - SoyBase

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Report for Sequence Feature Glyma06g41510

Feature Type:	gene_model
Chromosome:	Gm06
Start:	44792449
stop:	44798060
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma06g41510

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G54590	AT	Annotation by Michelle Graham. TAIR10: Protein kinase superfamily protein \| chr5:22180480-22182698 FORWARD LENGTH=440	SoyBase	E_val: 0	ISS
GO:0006468	GO-bp	Annotation by Michelle Graham. GO Biological Process: protein phosphorylation	SoyBase	N/A	ISS
GO:0009409	GO-bp	Annotation by Michelle Graham. GO Biological Process: response to cold	SoyBase	N/A	ISS
GO:0005886	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane	SoyBase	N/A	ISS
GO:0004672	GO-mf	Annotation by Michelle Graham. GO Molecular Function: protein kinase activity	SoyBase	N/A	ISS
GO:0004674	GO-mf	Annotation by Michelle Graham. GO Molecular Function: protein serine/threonine kinase activity	SoyBase	N/A	ISS
GO:0004713	GO-mf	Annotation by Michelle Graham. GO Molecular Function: protein tyrosine kinase activity	SoyBase	N/A	ISS
GO:0005516	GO-mf	Annotation by Michelle Graham. GO Molecular Function: calmodulin binding	SoyBase	N/A	ISS
GO:0005524	GO-mf	Annotation by Michelle Graham. GO Molecular Function: ATP binding	SoyBase	N/A	ISS
GO:0016772	GO-mf	Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring phosphorus-containing groups	SoyBase	N/A	ISS
KOG1187	KOG	Serine/threonine protein kinase	JGI		ISS
PTHR24420	Panther	FAMILY NOT NAMED	JGI		ISS
PTHR24420:SF419	Panther	SUBFAMILY NOT NAMED	JGI		ISS
PF07714	PFAM	Protein tyrosine kinase	JGI		ISS
UniRef100_C6ZRS6	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Serine/threonine protein kinase n=1 Tax=Glycine max RepID=C6ZRS6_SOYBN	SoyBase	E_val: 0	ISS
UniRef100_C6ZRS6	UniRef	Annotation by Michelle Graham. Best UniRef hit: Serine/threonine protein kinase n=1 Tax=Glycine max RepID=C6ZRS6_SOYBN	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma06g41510

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma06g41510 not represented in the dataset	Glyma06g41510 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma06g41510 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.06g265600	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma06g41510

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Transcripts of Glyma06g41510

Limit To All Plant Sequences

>Glyma06g41510.3   sequence type=transcript   gene model=Glyma06g41510   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
CTTCATTCATCAGATTCTTCAATTCTTCTCTCTCTCTTCCACACTGTAGTTTATGAGGCCTATAAATGGATTTGATGATCAATAGGGAACAATAGCAAATCAGTGAAGAGGAGATGAAAGAGGAGTCAGTTGGACTAATTATTGGGGTTTCCATAGGTGTGGTTATTGGACTAGTTTTGGCAATTTTTGCATTCTTCTGCCACCGATACCATCGGAAGCGATCACAGATAGGCAATAGCAGTTCTAGAAGGGCTGCTACCATACCTATTCGCACAAATGGTGCTGATTCGTGCACCATTCTTTCAGACTCAACCTTAGGTCCAGAATCACCCATAAAGTCAGATAGACATGGCATGCCCTTTTGGCTTGATGGGTTTAAGAAGAGTAGTAGTAGCATGATCCCAGCATCTGGACTACCTGAATATGCATACAAGGATTTGCAGAAGGCAACACATAACTTCACCACAGTCATTGGAGAAGGCGCATTTGGTCCTGTTTATAAAGCTCAGATGTCTACCGGTGAGACTGTTGCAGTTAAAGTTCTTGCAACTAATTCTAAGCAAGGGGAGAAAGAATTTAACACAGAGGTCATGTTGTTGGGAAGGTTACACCATAGAAATCTGGTGAATTTGGTTGGATATTGTGCAGAAAAGGGGAAACATATGCTTGTATATGTATACATGAGTAACGGTAGCTTGGCATCCCACTTGTATAGTGATGTGAATGAAGCACTGTCCTGGGATTTGAGGGTTCCCATAGCTTTAGATGTGGCAAGAGGCTTGGAATATCTTCATAATGGGGCAGTTCCTCCTGTAATCCATCGAGATATCAAATCTTCCAATATTCTGTTGGATCAATCCATGAGAGCCAGGGTTGCTGATTTTGGACTTTCAAGAGAAGAGATGGTGGATAAACATGCAGCTATTCGGGGTACCTTTGGCTATCTTGACCCCGAGTATATATCTTCCGGAACATTCACTAAGAAAAGTGATGTATACAGTTTTGGGGTGTTGCTCTTTGAAATTATAGCTGGCAGGAATCCTCAGCAGGGTCTTATGGAATACGTTGAGCTTGCAGCAATGAACACTGAGGGAAAAGTTGGGTGGGAGGAAATCGTGGATTCTCGCCTTCAAGGAAACTTTGATGTCAAGGAACTCAATGAAATGGCAGCACTTGCCTACAAATGCATCAACCGTGCCCCAAGTAAACGTCCTTCTATGAGGGACATAGTGCAAGTGTTAACAAGGATACTTAAATCAAGGAACCATGGGAGTCATCACAAAAATTCCTTGTCAGCCACAGATGAAGTTTTCATTGACACTGATCAGCTAGAGAACAAGATTTCTGTTACTGACCACAGGAGAGAAGAGTCTTTGGATAGTGTAGCAGAGGTGTATGAAGTGTAGAATATGGTTTTAACTTAACCTTTTTTTTTGTTACATTTCATTTTTTGATATTGGCTTTGGATGTACATGGTTGTAGATTTGGTTTGTATACTGTTTTGTAAAATGTTCTGTCCATTTTTTTGATATTCCCTTAGTTATATTGTCTTGCTGAAATGATATTTCAAAATTTGTATTGTCACAGGTATATCAGGAACTAATTTGGTTTGTGATACTCTAAATGTCACTGACCCAAATGATTTTTGCA

>Glyma06g41510.4   sequence type=transcript   gene model=Glyma06g41510   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
CTTCATTCATCAGATTCTTCAATTCTTCTCTCTCTCTTCCACACTGTAGTTTATGAGGTTGTTGTTTTTGGAGTTCTGTGGTAACATAAAGTACAAGTGACTGTCTCAGGGTTGCCTCTTTTGGAATTTTTTTTTGTGTTTTTTTGTTTTACTTTGTATGAACTGGTGAGTTTTTGGTCCGACGTCGTACGCGTTTTTTCCAAGAACATGTTTGCTTTTTGGCCAAACGTTGTTGCTGTCAGTTTCTGATCTGTCTGGTTATGTTTTTCAGTAAAGGGTGTTTTGTGTTTGTGTCATTCTGTGCTGATGTTTCATTGCTTATTAATGGGCCTATAAATGGATTTGATGATCAATAGGGAACAATAGCAAATCAGTGAAGAGGAGATGAAAGAGGAGTCAGTTGGACTAATTATTGGGGTTTCCATAGGTGTGGTTATTGGACTAGTTTTGGCAATTTTTGCATTCTTCTGCCACCGATACCATCGGAAGCGATCACAGATAGGCAATAGCAGTTCTAGAAGGGCTGCTACCATACCTATTCGCACAAATGGTGCTGATTCGTGCACCATTCTTTCAGACTCAACCTTAGGTCCAGAATCACCCATAAAGTCAGATAGACATGGCATGCCCTTTTGGCTTGATGGGTTTAAGAAGAGTAGTAGTAGCATGATCCCAGCATCTGGACTACCTGAATATGCATACAAGGATTTGCAGAAGGCAACACATAACTTCACCACAGTCATTGGAGAAGGCGCATTTGGTCCTGTTTATAAAGCTCAGATGTCTACCGGTGAGACTGTTGCAGTTAAAGTTCTTGCAACTAATTCTAAGCAAGGGGAGAAAGAATTTAACACAGAGGTCATGTTGTTGGGAAGGTTACACCATAGAAATCTGGTGAATTTGGTTGGATATTGTGCAGAAAAGGGGAAACATATGCTTGTATATGTATACATGAGTAACGGTAGCTTGGCATCCCACTTGTATAGTGATGTGAATGAAGCACTGTCCTGGGATTTGAGGGTTCCCATAGCTTTAGATGTGGCAAGAGGCTTGGAATATCTTCATAATGGGGCAGTTCCTCCTGTAATCCATCGAGATATCAAATCTTCCAATATTCTGTTGGATCAATCCATGAGAGCCAGGGTTGCTGATTTTGGACTTTCAAGAGAAGAGATGGTGGATAAACATGCAGCTATTCGGGGTACCTTTGGCTATCTTGACCCCGAGTATATATCTTCCGGAACATTCACTAAGAAAAGTGATGTATACAGTTTTGGGGTGTTGCTCTTTGAAATTATAGCTGGCAGGAATCCTCAGCAGGGTCTTATGGAATACGTTGAGCTTGCAGCAATGAACACTGAGGGAAAAGTTGGGTGGGAGGAAATCGTGGATTCTCGCCTTCAAGGAAACTTTGATGTCAAGGAACTCAATGAAATGGCAGCACTTGCCTACAAATGCATCAACCGTGCCCCAAGTAAACGTCCTTCTATGAGGGACATAGTGCAAGTGTTAACAAGGATACTTAAATCAAGGAACCATGGGAGTCATCACAAAAATTCCTTGTCAGCCACAGATGAAGTTTTCATTGACACTGATCAGCTAGAGAACAAGATTTCTGTTACTGACCACAGGAGAGAAGAGTCTTTGGATAGTGTAGCAGAGGTGTATGAAGTGTAGAATATGGTTTTAACTTAACCTTTTTTTTTGTTACATTTCATTTTTTGATATTGGCTTTGGATGTACATGGTTGTAGATTTGGTTTGTATACTGTTTTGTAAAATGTTCTGTCCATTTTTTTGATATTCCCTTAGTTATATTGTCTTGCTGAAATGATATTTCAAAATTTGTATTGTCACAGGTATATCAGGAACTAATTTGGTTTGTGATACTCTAAATGTCACTGACCCAAATGATTTTTGCA

Coding sequences of Glyma06g41510

Limit To All Plant Sequences

>Glyma06g41510.2   sequence type=CDS   gene model=Glyma06g41510   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAAAGAGGAGTCAGTTGGACTAATTATTGGGGTTTCCATAGGTGTGGTTATTGGACTAGTTTTGGCAATTTTTGCATTCTTCTGCCACCGATACCATCGGAAGCGATCACAGATAGGCAATAGCAGTTCTAGAAGGGCTGCTACCATACCTATTCGCACAAATGGTGCTGATTCGTGCACCATTCTTTCAGACTCAACCTTAGGTCCAGAATCACCCATAAAGTCAGATAGACATGGCATGCCCTTTTGGCTTGATGGGTTTAAGAAGAGTAGTAGTAGCATGATCCCAGCATCTGGACTACCTGAATATGCATACAAGGATTTGCAGAAGGCAACACATAACTTCACCACAGTCATTGGAGAAGGCGCATTTGGTCCTGTTTATAAAGCTCAGATGTCTACCGGTGAGACTGTTGCAGTTAAAGTTCTTGCAACTAATTCTAAGCAAGGGGAGAAAGAATTTAACACAGAGGTCATGTTGTTGGGAAGGTTACACCATAGAAATCTGGTGAATTTGGTTGGATATTGTGCAGAAAAGGGGAAACATATGCTTGTATATGTATACATGAGTAACGGTAGCTTGGCATCCCACTTGTATAGTGATGTGAATGAAGCACTGTCCTGGGATTTGAGGGTTCCCATAGCTTTAGATGTGGCAAGAGGCTTGGAATATCTTCATAATGGGGCAGTTCCTCCTGTAATCCATCGAGATATCAAATCTTCCAATATTCTGTTGGATCAATCCATGAGAGCCAGGGTTGCTGATTTTGGACTTTCAAGAGAAGAGATGGTGGATAAACATGCAGCTATTCGGGGTACCTTTGGCTATCTTGACCCCGAGTATATATCTTCCGGAACATTCACTAAGAAAAGTGATGTATACAGTTTTGGGGTGTTGCTCTTTGAAATTATAGCTGGCAGGAATCCTCAGCAGGGTCTTATGGAATACGTTGAGCTTGCAGCAATGAACACTGAGGGAAAAGTTGGGTGGGAGGAAATCGTGGATTCTCGCCTTCAAGGAAACTTTGATGTCAAGGAACTCAATGAAATGGCAGCACTTGCCTACAAATGCATCAACCGTGCCCCAAGTAAACGTCCTTCTATGAGGGACATAGTGCAAGTGTTAACAAGGATACTTAAATCAAGGAACCATGGGAGTCATCACAAAAATTCCTTGTCAGCCACAGATGAAGTTTTCATTGACACTGATCAGCTAGAGAACAAGATTTCTGTTACTGACCACAGGAGAGAAGAGTCTTTGGATAGTGTAGCAGAGGTGTATGAAGTGTAG

>Glyma06g41510.3   sequence type=CDS   gene model=Glyma06g41510   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAAAGAGGAGTCAGTTGGACTAATTATTGGGGTTTCCATAGGTGTGGTTATTGGACTAGTTTTGGCAATTTTTGCATTCTTCTGCCACCGATACCATCGGAAGCGATCACAGATAGGCAATAGCAGTTCTAGAAGGGCTGCTACCATACCTATTCGCACAAATGGTGCTGATTCGTGCACCATTCTTTCAGACTCAACCTTAGGTCCAGAATCACCCATAAAGTCAGATAGACATGGCATGCCCTTTTGGCTTGATGGGTTTAAGAAGAGTAGTAGTAGCATGATCCCAGCATCTGGACTACCTGAATATGCATACAAGGATTTGCAGAAGGCAACACATAACTTCACCACAGTCATTGGAGAAGGCGCATTTGGTCCTGTTTATAAAGCTCAGATGTCTACCGGTGAGACTGTTGCAGTTAAAGTTCTTGCAACTAATTCTAAGCAAGGGGAGAAAGAATTTAACACAGAGGTCATGTTGTTGGGAAGGTTACACCATAGAAATCTGGTGAATTTGGTTGGATATTGTGCAGAAAAGGGGAAACATATGCTTGTATATGTATACATGAGTAACGGTAGCTTGGCATCCCACTTGTATAGTGATGTGAATGAAGCACTGTCCTGGGATTTGAGGGTTCCCATAGCTTTAGATGTGGCAAGAGGCTTGGAATATCTTCATAATGGGGCAGTTCCTCCTGTAATCCATCGAGATATCAAATCTTCCAATATTCTGTTGGATCAATCCATGAGAGCCAGGGTTGCTGATTTTGGACTTTCAAGAGAAGAGATGGTGGATAAACATGCAGCTATTCGGGGTACCTTTGGCTATCTTGACCCCGAGTATATATCTTCCGGAACATTCACTAAGAAAAGTGATGTATACAGTTTTGGGGTGTTGCTCTTTGAAATTATAGCTGGCAGGAATCCTCAGCAGGGTCTTATGGAATACGTTGAGCTTGCAGCAATGAACACTGAGGGAAAAGTTGGGTGGGAGGAAATCGTGGATTCTCGCCTTCAAGGAAACTTTGATGTCAAGGAACTCAATGAAATGGCAGCACTTGCCTACAAATGCATCAACCGTGCCCCAAGTAAACGTCCTTCTATGAGGGACATAGTGCAAGTGTTAACAAGGATACTTAAATCAAGGAACCATGGGAGTCATCACAAAAATTCCTTGTCAGCCACAGATGAAGTTTTCATTGACACTGATCAGCTAGAGAACAAGATTTCTGTTACTGACCACAGGAGAGAAGAGTCTTTGGATAGTGTAGCAGAGGTGTATGAAGTGTAG

>Glyma06g41510.4   sequence type=CDS   gene model=Glyma06g41510   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAAAGAGGAGTCAGTTGGACTAATTATTGGGGTTTCCATAGGTGTGGTTATTGGACTAGTTTTGGCAATTTTTGCATTCTTCTGCCACCGATACCATCGGAAGCGATCACAGATAGGCAATAGCAGTTCTAGAAGGGCTGCTACCATACCTATTCGCACAAATGGTGCTGATTCGTGCACCATTCTTTCAGACTCAACCTTAGGTCCAGAATCACCCATAAAGTCAGATAGACATGGCATGCCCTTTTGGCTTGATGGGTTTAAGAAGAGTAGTAGTAGCATGATCCCAGCATCTGGACTACCTGAATATGCATACAAGGATTTGCAGAAGGCAACACATAACTTCACCACAGTCATTGGAGAAGGCGCATTTGGTCCTGTTTATAAAGCTCAGATGTCTACCGGTGAGACTGTTGCAGTTAAAGTTCTTGCAACTAATTCTAAGCAAGGGGAGAAAGAATTTAACACAGAGGTCATGTTGTTGGGAAGGTTACACCATAGAAATCTGGTGAATTTGGTTGGATATTGTGCAGAAAAGGGGAAACATATGCTTGTATATGTATACATGAGTAACGGTAGCTTGGCATCCCACTTGTATAGTGATGTGAATGAAGCACTGTCCTGGGATTTGAGGGTTCCCATAGCTTTAGATGTGGCAAGAGGCTTGGAATATCTTCATAATGGGGCAGTTCCTCCTGTAATCCATCGAGATATCAAATCTTCCAATATTCTGTTGGATCAATCCATGAGAGCCAGGGTTGCTGATTTTGGACTTTCAAGAGAAGAGATGGTGGATAAACATGCAGCTATTCGGGGTACCTTTGGCTATCTTGACCCCGAGTATATATCTTCCGGAACATTCACTAAGAAAAGTGATGTATACAGTTTTGGGGTGTTGCTCTTTGAAATTATAGCTGGCAGGAATCCTCAGCAGGGTCTTATGGAATACGTTGAGCTTGCAGCAATGAACACTGAGGGAAAAGTTGGGTGGGAGGAAATCGTGGATTCTCGCCTTCAAGGAAACTTTGATGTCAAGGAACTCAATGAAATGGCAGCACTTGCCTACAAATGCATCAACCGTGCCCCAAGTAAACGTCCTTCTATGAGGGACATAGTGCAAGTGTTAACAAGGATACTTAAATCAAGGAACCATGGGAGTCATCACAAAAATTCCTTGTCAGCCACAGATGAAGTTTTCATTGACACTGATCAGCTAGAGAACAAGATTTCTGTTACTGACCACAGGAGAGAAGAGTCTTTGGATAGTGTAGCAGAGGTGTATGAAGTGTAG

Predicted protein sequences of Glyma06g41510

Limit To All Plant Sequences

>Glyma06g41510.2   sequence type=predicted peptide   gene model=Glyma06g41510   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MKEESVGLIIGVSIGVVIGLVLAIFAFFCHRYHRKRSQIGNSSSRRAATIPIRTNGADSCTILSDSTLGPESPIKSDRHGMPFWLDGFKKSSSSMIPASGLPEYAYKDLQKATHNFTTVIGEGAFGPVYKAQMSTGETVAVKVLATNSKQGEKEFNTEVMLLGRLHHRNLVNLVGYCAEKGKHMLVYVYMSNGSLASHLYSDVNEALSWDLRVPIALDVARGLEYLHNGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAAIRGTFGYLDPEYISSGTFTKKSDVYSFGVLLFEIIAGRNPQQGLMEYVELAAMNTEGKVGWEEIVDSRLQGNFDVKELNEMAALAYKCINRAPSKRPSMRDIVQVLTRILKSRNHGSHHKNSLSATDEVFIDTDQLENKISVTDHRREESLDSVAEVYEV*

>Glyma06g41510.3   sequence type=predicted peptide   gene model=Glyma06g41510   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MKEESVGLIIGVSIGVVIGLVLAIFAFFCHRYHRKRSQIGNSSSRRAATIPIRTNGADSCTILSDSTLGPESPIKSDRHGMPFWLDGFKKSSSSMIPASGLPEYAYKDLQKATHNFTTVIGEGAFGPVYKAQMSTGETVAVKVLATNSKQGEKEFNTEVMLLGRLHHRNLVNLVGYCAEKGKHMLVYVYMSNGSLASHLYSDVNEALSWDLRVPIALDVARGLEYLHNGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAAIRGTFGYLDPEYISSGTFTKKSDVYSFGVLLFEIIAGRNPQQGLMEYVELAAMNTEGKVGWEEIVDSRLQGNFDVKELNEMAALAYKCINRAPSKRPSMRDIVQVLTRILKSRNHGSHHKNSLSATDEVFIDTDQLENKISVTDHRREESLDSVAEVYEV*

>Glyma06g41510.4   sequence type=predicted peptide   gene model=Glyma06g41510   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MKEESVGLIIGVSIGVVIGLVLAIFAFFCHRYHRKRSQIGNSSSRRAATIPIRTNGADSCTILSDSTLGPESPIKSDRHGMPFWLDGFKKSSSSMIPASGLPEYAYKDLQKATHNFTTVIGEGAFGPVYKAQMSTGETVAVKVLATNSKQGEKEFNTEVMLLGRLHHRNLVNLVGYCAEKGKHMLVYVYMSNGSLASHLYSDVNEALSWDLRVPIALDVARGLEYLHNGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAAIRGTFGYLDPEYISSGTFTKKSDVYSFGVLLFEIIAGRNPQQGLMEYVELAAMNTEGKVGWEEIVDSRLQGNFDVKELNEMAALAYKCINRAPSKRPSMRDIVQVLTRILKSRNHGSHHKNSLSATDEVFIDTDQLENKISVTDHRREESLDSVAEVYEV*

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