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Report for Sequence Feature Glyma06g41490

Feature Type:gene_model
Chromosome:Gm06
Start:44765885
stop:44772109
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G01690AT Annotation by Michelle Graham. TAIR10: ARM repeat superfamily protein | chr2:309144-313499 REVERSE LENGTH=743 SoyBaseE_val: 9.00E-79ISS
GO:0008150GO-bp Annotation by Michelle Graham. GO Biological Process: biological process SoyBaseN/AISS
GO:0005774GO-cc Annotation by Michelle Graham. GO Cellular Compartment: vacuolar membrane SoyBaseN/AISS
PTHR16023Panther TAX1 BINDING PROTEIN-RELATED JGI ISS
UniRef100_G7LAL0UniRef Annotation by Michelle Graham. Most informative UniRef hit: VAC14-like protein n=1 Tax=Medicago truncatula RepID=G7LAL0_MEDTR SoyBaseE_val: 3.00E-76ISS
UniRef100_I1KQB6UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1KQB6_SOYBN SoyBaseE_val: 7.00E-83ISS

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection
Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Corresponding NameAnnotation VersionEvidenceComments

Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

>Glyma06g41490.1   sequence type=CDS   gene model=Glyma06g41490   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
TTTAGTATTGAAGAATTCATACCACTGCTGAGGGAGCGCATGAATGTGTTGAATCCATATGTTCGTCAGTTTTTGGTAGGATGGATTACTGTATTGGATAGTGTCCCATATATTGATATGCTGGGGTTTCTTCCTGATTTTCTTGATGCCATTGTCCATTTTTTTATCTTTCCCCTAATCCATCTTTTAGGGTTGATATACCTCTGTGGCTCATTTTCAACTACTACTTTGACACAAAAGCAAAGTTTTTTGTTCATTTATCATTTTTTGACTCGAGCAGTGCTACTCTTGAAGTTTTTAGATTATGGTCGCATGGCTGAAATCCTGGTACAGAGGGCAGTTTCTCCAGATGAATTCACTAGGCTAACAGCTATCACATGGTTTGTCAAGCTTGGTGGAGACCAGCTTGTTCCATATTATGCTGACATTCTTGGAGCCATTTTGCCTTGTATAGCAGATAAAGAAGAGAAAATTAGAGTTGTTGCTCGTGAAACCAATGAAGAGCTACGTGCCCTCAAGGCAGATCCAGCTGAAGCGTTTGATGTAGGAGCAATCCTGTCCATTGCCAGGAGG

>Glyma06g41490.1   sequence type=predicted peptide   gene model=Glyma06g41490   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
FSIEEFIPLLRERMNVLNPYVRQFLVGWITVLDSVPYIDMLGFLPDFLDAIVHFFIFPLIHLLGLIYLCGSFSTTTLTQKQSFLFIYHFLTRAVLLLKFLDYGRMAEILVQRAVSPDEFTRLTAITWFVKLGGDQLVPYYADILGAILPCIADKEEKIRVVARETNEELRALKADPAEAFDVGAILSIARR







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