Report for Sequence Feature Glyma06g41490
Feature Type: gene_model
Chromosome: Gm06
Start: 44765885
stop: 44772109
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma06g41490
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT2G01690 AT
Annotation by Michelle Graham. TAIR10: ARM repeat superfamily protein | chr2:309144-313499 REVERSE LENGTH=743
SoyBase E_val: 9.00E-79 ISS
GO:0008150 GO-bp
Annotation by Michelle Graham. GO Biological Process: biological process
SoyBase N/A ISS
GO:0005774 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: vacuolar membrane
SoyBase N/A ISS
PTHR16023 Panther
TAX1 BINDING PROTEIN-RELATED
JGI ISS
UniRef100_G7LAL0 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: VAC14-like protein n=1 Tax=Medicago truncatula RepID=G7LAL0_MEDTR
SoyBase E_val: 3.00E-76 ISS
UniRef100_I1KQB6 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1KQB6_SOYBN
SoyBase E_val: 7.00E-83 ISS
Expression Patterns of Glyma06g41490
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Gene model name correspondences to Glyma06g41490 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
References for Glyma06g41490
Coding sequences of Glyma06g41490
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma06g41490.1 sequence type=CDS gene model=Glyma06g41490 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
TTTAGTATTGAAGAATTCATACCACTGCTGAGGGAGCGCATGAATGTGTTGAATCCATATGTTCGTCAGTTTTTGGTAGGATGGATTACTGTATTGGATAGTGTCCCATATATTGATATGCTGGGGTTTCTTCCTGATTTTCTTGATGCCATTGTCCATTTTTTTATCTTTCCCCTAATCCATCTTTTAGGGTTGATATACCTCTGTGGCTCATTTTCAACTACTACTTTGACACAAAAGCAAAGTTTTTTGTTCATTTATCATTTTTTGACTCGAGCAGTGCTACTCTTGAAGTTTTTAGATTATGGTCGCATGGCTGAAATCCTGGTACAGAGGGCAGTTTCTCCAGATGAATTCACTAGGCTAACAGCTATCACATGGTTTGTCAAGCTTGGTGGAGACCAGCTTGTTCCATATTATGCTGACATTCTTGGAGCCATTTTGCCTTGTATAGCAGATAAAGAAGAGAAAATTAGAGTTGTTGCTCGTGAAACCAATGAAGAGCTACGTGCCCTCAAGGCAGATCCAGCTGAAGCGTTTGATGTAGGAGCAATCCTGTCCATTGCCAGGAGG
Predicted protein sequences of Glyma06g41490
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma06g41490.1 sequence type=predicted peptide gene model=Glyma06g41490 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
FSIEEFIPLLRERMNVLNPYVRQFLVGWITVLDSVPYIDMLGFLPDFLDAIVHFFIFPLIHLLGLIYLCGSFSTTTLTQKQSFLFIYHFLTRAVLLLKFLDYGRMAEILVQRAVSPDEFTRLTAITWFVKLGGDQLVPYYADILGAILPCIADKEEKIRVVARETNEELRALKADPAEAFDVGAILSIARR