Glyma06g41263 - SoyBase

SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma06g41263

Feature Type:	gene_model
Chromosome:	Gm06
Start:	44539344
stop:	44539700
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma06g41263

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
PF02721	PFAM	Domain of unknown function DUF223	JGI		ISS
UniRef100_A2Q3D1	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Nucleic acid-binding, OB-fold, subgroup n=1 Tax=Medicago truncatula RepID=A2Q3D1_MEDTR	SoyBase	E_val: 5.00E-16	ISS
UniRef100_UPI000233E5B0	UniRef	Annotation by Michelle Graham. Best UniRef hit: UPI000233E5B0 related cluster n=1 Tax=unknown RepID=UPI000233E5B0	SoyBase	E_val: 5.00E-29	ISS

Expression Patterns of Glyma06g41263

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma06g41263 not represented in the dataset	Glyma06g41263 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma06g41263 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments

References for Glyma06g41263

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma06g41263

Limit To All Plant Sequences

>Glyma06g41263.1   sequence type=CDS   gene model=Glyma06g41263   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGTGCTGGGAGATAGAGTCCATGGTTCTGTGAAACGAACTCTCATTTATAAGTTTGAGAAAACCTTACAAGAGGGAAAAGTGTACTTTATTCAATTTTTTGATGTTGTTGAGAATGAAGATATATATAGAACCACCCACCGCAAGTACAAAATTATGTTTCAGTACTTCACTAAGGTTGCATTGGTGGACAATGCAAGTGTTCTAGACTTTGTGTATTATTTTGCACCTATAAAGATATATTGTTTGTGGTGGTTATGA

Predicted protein sequences of Glyma06g41263

Limit To All Plant Sequences

>Glyma06g41263.1   sequence type=predicted peptide   gene model=Glyma06g41263   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MVLGDRVHGSVKRTLIYKFEKTLQEGKVYFIQFFDVVENEDIYRTTHRKYKIMFQYFTKVALVDNASVLDFVYYFAPIKIYCLWWL*

Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA

U.S. Public Domain