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Report for Sequence Feature Glyma06g38310

Feature Type:gene_model
Chromosome:Gm06
Start:41176805
stop:41177430
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma06g38310
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G73910AT Annotation by Michelle Graham. TAIR10: actin-related proteins 4A | chr1:27789293-27790187 FORWARD LENGTH=145 SoyBaseE_val: 2.00E-43ISS
GO:0005737GO-cc Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm SoyBaseN/AISS
GO:0005200GO-mf Annotation by Michelle Graham. GO Molecular Function: structural constituent of cytoskeleton SoyBaseN/AISS
PTHR11937Panther ACTIN JGI ISS
PTHR11937:SF32Panther ACTIN-RELATED M1 JGI ISS
PF00022PFAM Actin JGI ISS
UniRef100_B9RE21UniRef Annotation by Michelle Graham. Most informative UniRef hit: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9RE21_RICCO SoyBaseE_val: 2.00E-41ISS
UniRef100_I1KDZ4UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1KDZ4_SOYBN SoyBaseE_val: 1.00E-71ISS

Expression Patterns of Glyma06g38310
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma06g38310 not represented in the dataset
Glyma06g38310 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma06g38310 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.06g248100 Wm82.a2.v1IGC As supplied by JGI

References for Glyma06g38310
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma06g38310
>Glyma06g38310.2   sequence type=CDS   gene model=Glyma06g38310   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTATGGCGGTGATGAAGTATCAATAATAGTGATAAACCTGGGTTCCCACACTTGCAAAGTCGGTTATGCTGGCAAAGATGCTCCCAAGGTTGTCCTTCCCTTTAGATATCTGGAACATACATTGTCACATACTTATGTTGTTGGTGCTATTGATCACATGGACATTGATGGAATTGCTGGTATTAATGATGAGAACTCTGACAAAACCAAGGGAAAATGTAAACTTTATGTAGGATCTCAATCATTAGGATACCGCAGAGACCATATGGAGGTGATGTCACCCTTGAAGAATGGAGTTGTTGTTGACTATAATGTTGTATACAACATATGGGATCATGCTTTGAGGTTGGTTCTCATTATTGATTCTGGCTATAATAGGATCATCATTTTG
Predicted protein sequences of Glyma06g38310
>Glyma06g38310.2   sequence type=predicted peptide   gene model=Glyma06g38310   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MYGGDEVSIIVINLGSHTCKVGYAGKDAPKVVLPFRYLEHTLSHTYVVGAIDHMDIDGIAGINDENSDKTKGKCKLYVGSQSLGYRRDHMEVMSPLKNGVVVDYNVVYNIWDHALRLVLIIDSGYNRIIIL






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