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Report for Sequence Feature Glyma06g37340

Feature Type:gene_model
Chromosome:Gm06
Start:39748270
stop:39749181
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma06g37340
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G56630AT Annotation by Michelle Graham. TAIR10: phosphofructokinase 7 | chr5:22924311-22926728 FORWARD LENGTH=485 SoyBaseE_val: 1.00E-12ISS
GO:0006096GO-bp Annotation by Michelle Graham. GO Biological Process: glycolysis SoyBaseN/AISS
GO:0005737GO-cc Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm SoyBaseN/AISS
GO:0005829GO-cc Annotation by Michelle Graham. GO Cellular Compartment: cytosol SoyBaseN/AISS
GO:0005945GO-cc Annotation by Michelle Graham. GO Cellular Compartment: 6-phosphofructokinase complex SoyBaseN/AISS
GO:0003872GO-mf Annotation by Michelle Graham. GO Molecular Function: 6-phosphofructokinase activity SoyBaseN/AISS
GO:0005524GO-mf Annotation by Michelle Graham. GO Molecular Function: ATP binding SoyBaseN/AISS
UniRef100_C1K4P9UniRef Annotation by Michelle Graham. Most informative UniRef hit: Phosphofructokinase (Fragment) n=1 Tax=Elaeis oleifera RepID=C1K4P9_ELAOL SoyBaseE_val: 2.00E-10ISS
UniRef100_I1KKR9UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein (Fragment) n=1 Tax=Glycine max RepID=I1KKR9_SOYBN SoyBaseE_val: 3.00E-25ISS

Expression Patterns of Glyma06g37340
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma06g37340 not represented in the dataset
Glyma06g37340 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma06g37340 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.06g243200 Wm82.a2.v1IGC As supplied by JGI

References for Glyma06g37340
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma06g37340
>Glyma06g37340.1   sequence type=CDS   gene model=Glyma06g37340   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGCTTTGCACTGCAGAACTTATTGTGCTGCAAATTCGTTGCCCTGCTTGATATTGTTGGTTCTGCTTCTCCAACATAGATATGATTTATTTGTTAAGAATAGAATCACTCAGGGACAGAACAAAGTGCTAATTACTGATAGAATGTGGGCTAGGCTTCTATCTTCAACAAATCTGCCCAGCTTTACGATTGCTAAGACTGTCTCTGAAGAAAAAAGGGAAGAAGAAGCAAACGGTAATGTCCCTGAGTAA
Predicted protein sequences of Glyma06g37340
>Glyma06g37340.1   sequence type=predicted peptide   gene model=Glyma06g37340   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MALHCRTYCAANSLPCLILLVLLLQHRYDLFVKNRITQGQNKVLITDRMWARLLSSTNLPSFTIAKTVSEEKREEEANGNVPE*






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