Report for Sequence Feature Glyma06g37080
Feature Type: gene_model
Chromosome: Gm06
Start: 39465949
stop: 39473714
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma06g37080
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT3G15354 AT
Annotation by Michelle Graham. TAIR10: SPA1-related 3 | chr3:5169327-5172480 REVERSE LENGTH=837
SoyBase E_val: 0 ISS
GO:0006468 GO-bp
Annotation by Michelle Graham. GO Biological Process: protein phosphorylation
SoyBase N/A ISS
GO:0005634 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: nucleus
SoyBase N/A ISS
GO:0005834 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: heterotrimeric G-protein complex
SoyBase N/A ISS
GO:0080008 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: CUL4-RING ubiquitin ligase complex
SoyBase N/A ISS
GO:0004672 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein kinase activity
SoyBase N/A ISS
GO:0004871 GO-mf
Annotation by Michelle Graham. GO Molecular Function: signal transducer activity
SoyBase N/A ISS
GO:0005515 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein binding
SoyBase N/A ISS
GO:0005524 GO-mf
Annotation by Michelle Graham. GO Molecular Function: ATP binding
SoyBase N/A ISS
GO:0016772 GO-mf
Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring phosphorus-containing groups
SoyBase N/A ISS
GO:0042802 GO-mf
Annotation by Michelle Graham. GO Molecular Function: identical protein binding
SoyBase N/A ISS
KOG0265
KOG
U5 snRNP-specific protein-like factor and related proteins
JGI ISS
PTHR22847 Panther
WD40 REPEAT PROTEIN
JGI ISS
PTHR22847:SF121 Panther
SUBFAMILY NOT NAMED
JGI ISS
PF00069 PFAM
Protein kinase domain
JGI ISS
PF00400 PFAM
WD domain, G-beta repeat
JGI ISS
UniRef100_G7IRA7 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: SPA1-like protein n=1 Tax=Medicago truncatula RepID=G7IRA7_MEDTR
SoyBase E_val: 0 ISS
UniRef100_UPI000233A445 UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI000233A445 related cluster n=1 Tax=unknown RepID=UPI000233A445
SoyBase E_val: 0 ISS
Expression Patterns of Glyma06g37080
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Gene model name correspondences to Glyma06g37080 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.06g242100 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma06g37080
Transcripts of Glyma06g37080
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma06g37080.2 sequence type=transcript gene model=Glyma06g37080 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
AGAAACTAGAGAGTTTGGTATAGCTTGGTCTAGTAGAAACAGAACATACTTCTATGGTGATAATACCTCTCTCCCTCTTTCTCTCTCCATATATCTCTGGTGAACATTTGGAACCAAATGAGAAAATTTTGATCCTTTTTTGAGGGCCAATGTTGTTTTTCCATATTTTCGAGCTATCTGCGCCATAATGGAGAAAAATCTATATCTAAAATTAAAAAAAAAATAAAATGAAATTTTGTCAATGCGTTCTGTGGCAACAAACTGAGAAATTGGTCTTGATTCTTGAAGTTGGCCTACTGAGTATATCTTTGTGGCACGAGTGTGATACATGTTGGATAATTACCGTACAGTATATACATTGGCATTCATGTAACTCTTAATGGATGAAAATGAATGGTTGATCTGCTGGGTTTCCTTGGCAGAATATTTTCATTTCTAGAGCCTTAAATTGTTTTGGAGGCTTTGATAGGTACTCACAAAGGCTTTTCAAGATTCTAGCTTCAAAAAACCAAAGAGACAGGGTTGTGTTTGCTCAAGGTGATGAGCATAAAAACCTTGGTGGTTTTTTTGGTGTATTTGAGGATAAAGTAGGGGTTGAACTTGAGACCCTTTTGTTTGTGCTATAGAATGGGTGATATTAGCTTGAGGCTATGGTTGGATAAACCTGAACGATCAGTGAATGTCTTTGAATGCTTGCACATATTCAGGGAAATAGTAGAAATTGTTCATGCGGCTCATTCTCAAGGAATTGTTGTTCATAATGTGAGGCCCTCCTGCTTTGTCATGTCAGCTTTCAACCATGTCTGGCTTATCGAGTCAGCAACTTGTTCACATTCTGGATCAGATACATTAGAAGAGGCTGTTGAGATCAAAACTCCAACACCTACCTCTATCCATGATATGCATCAGCGGAGATGTTTAGGAAGTGAAGATTTTGTGCCTGTCAAGACTTCAACAGCTTCTTTGACAGACTCCAGTTGCATGTTGTCAAGTGTGGTGTTTCTGGCACCTGCATCATCAGTTGATGACACAGAAGAAAATAAAATGAAAAACAGGAGAAAGGATGAGGAAGTTGCAGGAAAGAAGCAATCATTTCCAACAAAACAGGTACTGCAGATGGAGACAAGTTGGTATACTAGTCCTGAAGAGGTTGCTGGTACTTCTTTGCCTTCCTGTGCTTCAGACGTTTACCAGTTGGGAGTTCTTCTTTTTGAGCTATTTTGTCCACTCATCTCAAGAGAAGAAAAGAGAAGAACCATGTCCAGCCTAAGACATAGAGTTCTTCCTCCACAGTTACTTTTAAAGTGGCCTAAAGAAGCTTCATTTTGCTTGTGGTTATTACATCCTGAGCCTAATAGTCGTCCAACAATAGGGGAGTTGTTGCAGAGTGAGTTTCTTAATGAACCAAGAGATGATATAGAAAAGTGTGAAGCAGTGGTAGAAATTGGAGAAAGGATAGATGACCAGGAGTTGTTGCTAGAATTCCTTTCGTTAATTCAACAGAAAAAAGGGGAAGCTGCTGAGAAGTTACAACATACTATCTCATTTTTGTGTTCAGATATTGAAGAAGCGACTAAGCAGAAAACTGTATTTAAAGAGATGACAAGCACTGAACTAGGGAGTGATGATTGTTCAACATCAAGTTTCCCATCCATTACTGTTGTTGGGAATGAGGATTCTGCTTGTCTAGGGACCAGAAAACGGGTCAGAACTATTCCGTGTGTTGATGACACTGACACTGAAGGATGTGAATGTGATAGTAACATGGTTGATGATCAGAAAAATGACACGAGTATTCTTTCAAAAACTCCACGGTTTTTGAATAATTTAAAGAAACTAGAGTCAGCATACTTTTTGACACGATGCAAATCTGCCTATTCCTCACGGAAACTTGTGGTTCAAGATTCACCTATTGATATTACTGATGAAAAAGGGTCTGTTGTTGTGGCTGAAAGGAATTGTGCCAATAAAGTAGAATTAAAAGAAATGTCCAGGGAGGGCAAAAGTCTTTGGACAAATCCTTTCCTTGAGGGTTTGTGCAAGTACCTATCGTTCAGTAAGTTGAAGGTTAAGGCTGATCTTAAACAAGGGGATCTTTTGCAGTCTTCCAACCTGGTATGCTCACTCAGCTTTGATCGCGATGCAGAATTTTTTGCTACTGCGGGAGTAAATAAGAAGATTAAAGTTTTTGAATGTAACACAACCATAAATGAGTATCGTGATATCCACTATCCAGTAGTGGAGATGGTTAGCCGGTCAACATTGAGTAGTACATGTTGGAATACTTACATCAAGAGTCAAATTGCTTCGAGTAACTTTGAAGGTGTTGTACAGTTATGGGATGTGACAAGAAGTCAAGTGCAGTCTGAAATGAAGGAGCATGAACGAAGGGTATGGTCTATTGATTTCTCATCAGCAGACCCAACATTGTTAGCAAGTGGGAGTGATGACGGTTCTGTCAAGCTATGGAATATCAATCAGATCACCAGATATATTACTATGATCTTCGCAACCTGAAAGTGCCTCTTTGTGCAATGGTTGGACATGATAAGACAGTGAGCTACATCAAGTTTGTAGACACCATGAGCCTAGTCTCTGCATCCACAGATAACACATTGAAGCTTTGGGATTTGTCCATGTGTGCTTCTCGAGTTATAGACTCACCAATTCAATCATTCACTGGTCATAAGAATGTTAAGAACTTCGTGGGGTTGTCTGTATCTGATGGTTACATTGCTACTGGTTCAGAGACAAACGAGGTGTTCATATACCACAAGGCTTTTCCCATGCCAGCATTATCTTTCAAATTTTACAGTAGTGACCCTCTTTCTGGGAATGAAGAGGATGATTCGGCACAGTTCATCACTTCTGTTTGTTGGCGCGGTCAGTCATCCACCTTAGTGGCTGCAAATTCCACAGGAAATGTCAAAATTCTGCAGATGACTTAAGTAGGTCTTTAGTTGGGAATAATTTTCTACATTAGGTTACAGAATAATTGTTCATGCATGGTTAGCTTTGTGTTGCCGGAAAAGGCTATAGAGAAGCGTATACAAATTCCATGATTAGGGTGTCTAAGGTGTGAAAGTTAAAGAACTTACGCACTATGTGGAAGCTTATAAGAATGGGGCAAGAATCATGTGTACCATCAGATTTAGCAATAAAAAAAGGAATGGATAGGATTTGTTGATGTCTACCAGTTTGGGGGTATTTGTAAAAAATAAGGTTATTGAAAATGTTTCTGTGTAGTGAAAAAATGATTCTTATTTGTTTGGTAGGCACTAG
Coding sequences of Glyma06g37080
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma06g37080.1 sequence type=CDS gene model=Glyma06g37080 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGGTGATATTAGCTTGAGGCTATGGTTGGATAAACCTGAACGATCAGTGAATGTCTTTGAATGCTTGCACATATTCAGGGAAATAGTAGAAATTGTTCATGCGGCTCATTCTCAAGGAATTGTTGTTCATAATGTGAGGCCCTCCTGCTTTGTCATGTCAGCTTTCAACCATGTCTGGCTTATCGAGTCAGCAACTTGTTCACATTCTGGATCAGATACATTAGAAGAGGCTGTTGAGATCAAAACTCCAACACCTACCTCTATCCATGATATGCATCAGCGGAGATGTTTAGGAAGTGAAGATTTTGTGCCTGTCAAGACTTCAACAGCTTCTTTGACAGACTCCAGTTGCATGTTGTCAAGTGTGGTGTTTCTGGCACCTGCATCATCAGTTGATGACACAGAAGAAAATAAAATGAAAAACAGGAGAAAGGATGAGGAAGTTGCAGGAAAGAAGCAATCATTTCCAACAAAACAGGTACTGCAGATGGAGACAAGTTGGTATACTAGTCCTGAAGAGGTTGCTGGTACTTCTTTGCCTTCCTGTGCTTCAGACGTTTACCAGTTGGGAGTTCTTCTTTTTGAGCTATTTTGTCCACTCATCTCAAGAGAAGAAAAGAGAAGAACCATGTCCAGCCTAAGACATAGAGTTCTTCCTCCACAGTTACTTTTAAAGTGGCCTAAAGAAGCTTCATTTTGCTTGTGGTTATTACATCCTGAGCCTAATAGTCGTCCAACAATAGGGGAGTTGTTGCAGAGTGAGTTTCTTAATGAACCAAGAGATGATATAGAAAAGTGTGAAGCAGTGGTAGAAATTGGAGAAAGGATAGATGACCAGGAGTTGTTGCTAGAATTCCTTTCGTTAATTCAACAGAAAAAAGGGGAAGCTGCTGAGAAGTTACAACATACTATCTCATTTTTGTGTTCAGATATTGAAGAAGCGACTAAGCAGAAAACTGTATTTAAAGAGATGACAAGCACTGAACTAGGGAGTGATGATTGTTCAACATCAAGTTTCCCATCCATTACTGTTGTTGGGAATGAGGATTCTGCTTGTCTAGGGACCAGAAAACGGGTCAGAACTATTCCGTGTGTTGATGACACTGACACTGAAGGATGTGAATGTGATAGTAACATGGTTGATGATCAGAAAAATGACACGAGTATTCTTTCAAAAACTCCACGGTTTTTGAATAATTTAAAGAAACTAGAGTCAGCATACTTTTTGACACGATGCAAATCTGCCTATTCCTCACGGAAACTTGTGGTTCAAGATTCACCTATTGATATTACTGATGAAAAAGGGTCTGTTGTTGTGGCTGAAAGGAATTGTGCCAATAAAGTAGAATTAAAAGAAATGTCCAGGGAGGGCAAAAGTCTTTGGACAAATCCTTTCCTTGAGGGTTTGTGCAAGTACCTATCGTTCAGTAAGTTGAAGGTTAAGGCTGATCTTAAACAAGGGGATCTTTTGCAGTCTTCCAACCTGGTATGCTCACTCAGCTTTGATCGCGATGCAGAATTTTTTGCTACTGCGGGAGTAAATAAGAAGATTAAAGTTTTTGAATGTAACACAACCATAAATGAGTATCGTGATATCCACTATCCAGTAGTGGAGATGGTTAGCCGGTCAACATTGAGTAGTACATGTTGGAATACTTACATCAAGAGTCAAATTGCTTCGAGTAACTTTGAAGGTGTTGTACAGTTATGGGATGTGACAAGAAGTCAAGTGCAGTCTGAAATGAAGGAGCATGAACGAAGGGTATGGTCTATTGATTTCTCATCAGCAGACCCAACATTGTTAGCAAGTGGGAGTGATGACGGTTCTGTCAAGCTATGGAATATCAATCAGGGAGTTAGTGTTGGTACCATCAAAACAAAGGCAAATGTGTGTTGTGTTCAGTTTCCCCTTGATTTTGCTCATTTCCTTGCATTTGGTTCAGCAGATCACCAGATATATTACTATGATCTTCGCAACCTGAAAGTGCCTCTTTGTGCAATGGTTGGACATGATAAGACAGTGAGCTACATCAAGTTTGTAGACACCATGAGCCTAGTCTCTGCATCCACAGATAACACATTGAAGCTTTGGGATTTGTCCATGTGTGCTTCTCGAGTTATAGACTCACCAATTCAATCATTCACTGGTCATAAGAATGTTAAGAACTTCGTGGGGTTGTCTGTATCTGATGGTTACATTGCTACTGGTTCAGAGACAAACGAGGTGTTCATATACCACAAGGCTTTTCCCATGCCAGCATTATCTTTCAAATTTTACAGTAGTGACCCTCTTTCTGGGAATGAAGAGGATGATTCGGCACAGTTCATCACTTCTGTTTGTTGGCGCGGTCAGTCATCCACCTTAGTGGCTGCAAATTCCACAGGAAATGTCAAAATTCTGCAGATGACTTAA
>Glyma06g37080.2 sequence type=CDS gene model=Glyma06g37080 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGGTGATATTAGCTTGAGGCTATGGTTGGATAAACCTGAACGATCAGTGAATGTCTTTGAATGCTTGCACATATTCAGGGAAATAGTAGAAATTGTTCATGCGGCTCATTCTCAAGGAATTGTTGTTCATAATGTGAGGCCCTCCTGCTTTGTCATGTCAGCTTTCAACCATGTCTGGCTTATCGAGTCAGCAACTTGTTCACATTCTGGATCAGATACATTAGAAGAGGCTGTTGAGATCAAAACTCCAACACCTACCTCTATCCATGATATGCATCAGCGGAGATGTTTAGGAAGTGAAGATTTTGTGCCTGTCAAGACTTCAACAGCTTCTTTGACAGACTCCAGTTGCATGTTGTCAAGTGTGGTGTTTCTGGCACCTGCATCATCAGTTGATGACACAGAAGAAAATAAAATGAAAAACAGGAGAAAGGATGAGGAAGTTGCAGGAAAGAAGCAATCATTTCCAACAAAACAGGTACTGCAGATGGAGACAAGTTGGTATACTAGTCCTGAAGAGGTTGCTGGTACTTCTTTGCCTTCCTGTGCTTCAGACGTTTACCAGTTGGGAGTTCTTCTTTTTGAGCTATTTTGTCCACTCATCTCAAGAGAAGAAAAGAGAAGAACCATGTCCAGCCTAAGACATAGAGTTCTTCCTCCACAGTTACTTTTAAAGTGGCCTAAAGAAGCTTCATTTTGCTTGTGGTTATTACATCCTGAGCCTAATAGTCGTCCAACAATAGGGGAGTTGTTGCAGAGTGAGTTTCTTAATGAACCAAGAGATGATATAGAAAAGTGTGAAGCAGTGGTAGAAATTGGAGAAAGGATAGATGACCAGGAGTTGTTGCTAGAATTCCTTTCGTTAATTCAACAGAAAAAAGGGGAAGCTGCTGAGAAGTTACAACATACTATCTCATTTTTGTGTTCAGATATTGAAGAAGCGACTAAGCAGAAAACTGTATTTAAAGAGATGACAAGCACTGAACTAGGGAGTGATGATTGTTCAACATCAAGTTTCCCATCCATTACTGTTGTTGGGAATGAGGATTCTGCTTGTCTAGGGACCAGAAAACGGGTCAGAACTATTCCGTGTGTTGATGACACTGACACTGAAGGATGTGAATGTGATAGTAACATGGTTGATGATCAGAAAAATGACACGAGTATTCTTTCAAAAACTCCACGGTTTTTGAATAATTTAAAGAAACTAGAGTCAGCATACTTTTTGACACGATGCAAATCTGCCTATTCCTCACGGAAACTTGTGGTTCAAGATTCACCTATTGATATTACTGATGAAAAAGGGTCTGTTGTTGTGGCTGAAAGGAATTGTGCCAATAAAGTAGAATTAAAAGAAATGTCCAGGGAGGGCAAAAGTCTTTGGACAAATCCTTTCCTTGAGGGTTTGTGCAAGTACCTATCGTTCAGTAAGTTGAAGGTTAAGGCTGATCTTAAACAAGGGGATCTTTTGCAGTCTTCCAACCTGGTATGCTCACTCAGCTTTGATCGCGATGCAGAATTTTTTGCTACTGCGGGAGTAAATAAGAAGATTAAAGTTTTTGAATGTAACACAACCATAAATGAGTATCGTGATATCCACTATCCAGTAGTGGAGATGGTTAGCCGGTCAACATTGAGTAGTACATGTTGGAATACTTACATCAAGAGTCAAATTGCTTCGAGTAACTTTGAAGGTGTTGTACAGTTATGGGATGTGACAAGAAGTCAAGTGCAGTCTGAAATGAAGGAGCATGAACGAAGGGTATGGTCTATTGATTTCTCATCAGCAGACCCAACATTGTTAGCAAGTGGGAGTGATGACGGTTCTGTCAAGCTATGGAATATCAATCAGATCACCAGATATATTACTATGATCTTCGCAACCTGA
Predicted protein sequences of Glyma06g37080
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma06g37080.1 sequence type=predicted peptide gene model=Glyma06g37080 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MGDISLRLWLDKPERSVNVFECLHIFREIVEIVHAAHSQGIVVHNVRPSCFVMSAFNHVWLIESATCSHSGSDTLEEAVEIKTPTPTSIHDMHQRRCLGSEDFVPVKTSTASLTDSSCMLSSVVFLAPASSVDDTEENKMKNRRKDEEVAGKKQSFPTKQVLQMETSWYTSPEEVAGTSLPSCASDVYQLGVLLFELFCPLISREEKRRTMSSLRHRVLPPQLLLKWPKEASFCLWLLHPEPNSRPTIGELLQSEFLNEPRDDIEKCEAVVEIGERIDDQELLLEFLSLIQQKKGEAAEKLQHTISFLCSDIEEATKQKTVFKEMTSTELGSDDCSTSSFPSITVVGNEDSACLGTRKRVRTIPCVDDTDTEGCECDSNMVDDQKNDTSILSKTPRFLNNLKKLESAYFLTRCKSAYSSRKLVVQDSPIDITDEKGSVVVAERNCANKVELKEMSREGKSLWTNPFLEGLCKYLSFSKLKVKADLKQGDLLQSSNLVCSLSFDRDAEFFATAGVNKKIKVFECNTTINEYRDIHYPVVEMVSRSTLSSTCWNTYIKSQIASSNFEGVVQLWDVTRSQVQSEMKEHERRVWSIDFSSADPTLLASGSDDGSVKLWNINQGVSVGTIKTKANVCCVQFPLDFAHFLAFGSADHQIYYYDLRNLKVPLCAMVGHDKTVSYIKFVDTMSLVSASTDNTLKLWDLSMCASRVIDSPIQSFTGHKNVKNFVGLSVSDGYIATGSETNEVFIYHKAFPMPALSFKFYSSDPLSGNEEDDSAQFITSVCWRGQSSTLVAANSTGNVKILQMT*
>Glyma06g37080.2 sequence type=predicted peptide gene model=Glyma06g37080 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MGDISLRLWLDKPERSVNVFECLHIFREIVEIVHAAHSQGIVVHNVRPSCFVMSAFNHVWLIESATCSHSGSDTLEEAVEIKTPTPTSIHDMHQRRCLGSEDFVPVKTSTASLTDSSCMLSSVVFLAPASSVDDTEENKMKNRRKDEEVAGKKQSFPTKQVLQMETSWYTSPEEVAGTSLPSCASDVYQLGVLLFELFCPLISREEKRRTMSSLRHRVLPPQLLLKWPKEASFCLWLLHPEPNSRPTIGELLQSEFLNEPRDDIEKCEAVVEIGERIDDQELLLEFLSLIQQKKGEAAEKLQHTISFLCSDIEEATKQKTVFKEMTSTELGSDDCSTSSFPSITVVGNEDSACLGTRKRVRTIPCVDDTDTEGCECDSNMVDDQKNDTSILSKTPRFLNNLKKLESAYFLTRCKSAYSSRKLVVQDSPIDITDEKGSVVVAERNCANKVELKEMSREGKSLWTNPFLEGLCKYLSFSKLKVKADLKQGDLLQSSNLVCSLSFDRDAEFFATAGVNKKIKVFECNTTINEYRDIHYPVVEMVSRSTLSSTCWNTYIKSQIASSNFEGVVQLWDVTRSQVQSEMKEHERRVWSIDFSSADPTLLASGSDDGSVKLWNINQITRYITMIFAT*