Report for Sequence Feature Glyma06g37050
Feature Type: gene_model
Chromosome: Gm06
Start: 39388730
stop: 39389713
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma06g37050
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT4G10720 AT
Annotation by Michelle Graham. TAIR10: Ankyrin repeat family protein | chr4:6607879-6609358 FORWARD LENGTH=412
SoyBase E_val: 6.00E-38 ISS
GO:0008150 GO-bp
Annotation by Michelle Graham. GO Biological Process: biological process
SoyBase N/A ISS
GO:0005575 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: cellular component
SoyBase N/A ISS
KOG4412
KOG
26S proteasome regulatory complex, subunit PSMD10
JGI ISS
PF00023 PFAM
Ankyrin repeat
JGI ISS
UniRef100_G7L8Q1 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Ankyrin repeat protein n=1 Tax=Medicago truncatula RepID=G7L8Q1_MEDTR
SoyBase E_val: 2.00E-62 ISS
UniRef100_I1KDV8 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein (Fragment) n=1 Tax=Glycine max RepID=I1KDV8_SOYBN
SoyBase E_val: 8.00E-161 ISS
Expression Patterns of Glyma06g37050
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Gene model name correspondences to Glyma06g37050 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
References for Glyma06g37050
Coding sequences of Glyma06g37050
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma06g37050.2 sequence type=CDS gene model=Glyma06g37050 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGTCCTTCGCCTTGTAGAAATGAACAAAGACCTCGTCCGAGTCAAAGGGAGGGAAGGCTTCACTCCGCTGCATTTGGCAAGTCAAGAAAATAAAACTGAGGTTTTGGATAAGTTCCTCAAGGCTTGTCCAGATTCCGTTGAAGATGTGACTGCTAGAAGTGAGACTGCACTACATATTGCAGTGAAACATGGACACTATGAGACACTTCAAGTCCTATTTCGGTGGCTCATGAGAAATTCCCGAAAAGATTCTCATAAGTTCATAAGAACAATGTTGGACTGGAAGGATCAAAAAGGCAATACCGTTTTGCACGTTGCAGCACTCAACGATCACATAGAGGCAGTGTCATTATTGTTAACTATGGTTGATTTAGATGCCAAGAATTTAGAAGGCAAAACAGCATCAGACATTGCAAGCAGCGAGCATATGAGGAGCATATTAATCAGGGACCCTGGGTTTATTGAGTCCTTGCGATATATATATATATATAGGGGTTTTCTTCTCAGGTTTAGATGGCATATGACAGAGGAGGAAAGCAACACATATTTGGTAGTTGTTGCTCTTATTGCGACCGCCATTTATCAAGTAGCCCTGAGTCCCCCTGGTGGATTATATCCATCTAATGTTAGGACTAATAATAATACTATGTTGGAAGCGCCA
Predicted protein sequences of Glyma06g37050
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma06g37050.2 sequence type=predicted peptide gene model=Glyma06g37050 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MVLRLVEMNKDLVRVKGREGFTPLHLASQENKTEVLDKFLKACPDSVEDVTARSETALHIAVKHGHYETLQVLFRWLMRNSRKDSHKFIRTMLDWKDQKGNTVLHVAALNDHIEAVSLLLTMVDLDAKNLEGKTASDIASSEHMRSILIRDPGFIESLRYIYIYRGFLLRFRWHMTEEESNTYLVVVALIATAIYQVALSPPGGLYPSNVRTNNNTMLEAP