Report for Sequence Feature Glyma06g36910
Feature Type: gene_model
Chromosome: Gm06
Start: 39254649
stop: 39256561
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma06g36910
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT4G10720 AT
Annotation by Michelle Graham. TAIR10: Ankyrin repeat family protein | chr4:6607879-6609358 FORWARD LENGTH=445
SoyBase E_val: 1.00E-81 ISS
GO:0008150 GO-bp
Annotation by Michelle Graham. GO Biological Process: biological process
SoyBase N/A ISS
GO:0005575 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: cellular component
SoyBase N/A ISS
KOG4412
KOG
26S proteasome regulatory complex, subunit PSMD10
JGI ISS
PTHR24198 Panther
ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAININ
JGI ISS
PTHR24198:SF302 Panther
JGI ISS
UniRef100_G7L8Q1 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Ankyrin repeat protein n=1 Tax=Medicago truncatula RepID=G7L8Q1_MEDTR
SoyBase E_val: 3.00E-116 ISS
UniRef100_UPI000233A43E UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI000233A43E related cluster n=1 Tax=unknown RepID=UPI000233A43E
SoyBase E_val: 0 ISS
Expression Patterns of Glyma06g36910
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Gene model name correspondences to Glyma06g36910 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.06g241600 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma06g36910
Coding sequences of Glyma06g36910
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma06g36910.1 sequence type=CDS gene model=Glyma06g36910 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGAGTTCTGACGCGTTGAAAGTTGCTGCCGAAGGGAATAACATAGACGGTCTCTACCAAGAGATTCAGCAGGATCCACGTATTTTGGAGTCCATAGATTCAATCCCATTTGTTGAAACTCCTTTGCATGTTGCTGCAACTCTTGGTCATTTTGAGTTTGCTACTGAGATCATGACACTGAAACCTTCATTTGCTCAGAAACTAAATCCAGAAGGCTTCACTCCCATCCACCTTGCTTTACAATGCAACCATGACGAAATGGTCCTTCGCCTTGTAGAAATGAACAAAGATCTCGTCCGAGTCAAAGGGAGGGAAGGCTTCACTCCGCTACATTTGGCAAGTCAAGAAAATAAAACTGAGCTTTTGCATAAGTTCCTCAAGGCTTGTCCAGATTCCATTGAAGATGTGACTGCTAGAAGTGAGACTGCACTGCATATTGCAGTGAAACATGGACACTATGAGATACTTCAAGTCCTATTTCGGTGGCTCAAGAGAAATTCCCGAAAAGATTCTCTAAAGTTCATAAGAACAATGTTGAACTGGAAGGATCAAAAAGGCAATACCGTTGTGCACGTTGCAGCACTCAACGATCACATAGAGGCAGTGTCATTATTGTTAACTATGGTGGATTTAGATGCCAAGAATTCAGAAGGCAAAACAGCATCAGACATTGCAAGCAGCGACCATATGAAGAGCATATTAATCAAGGACCTTGGGTTTTTTGAGTCCTTGGCCTTGTTACGAAATAAATTTAGGAATTTTTTTCTCAGGTTTAGACGGTATATGACAGAAGAGGAACGCAACGCATATTTGGTAGTTGCCGCTCTTATTGCGACCGCCACTTATCAAGCAGCCCTGAGTCCCCCTGGTGGATTATATCCATCTGATGTTGGGACTAATAATAATACTAGTCATGTGGTGGCCTCTACTCATTCCATAAATGACAAATCTTCAATTCCAAAAGACGGGAACTCAATCATGTCTGCAACAGAGTTTAGTTTGTTTTCGGTCGCTAATACGTGTTCCTTTATGTCATCAACTTTCGCAATTATCCTTCTATTGCCGATGACGAATGTTATGTGGATTCTACTATATTCGCCGCCGTTCTTCCTTCAGCTTAGCTTCTTTATCGCTATGATGGTGATATCTCCCACCCCTCTTAACGTATACGTGGTTACGATTTTTTTGGCAGTATATATGTTGCTCTTTTATTCTTTTTTACCATTTACGTATTATAAACTTCTTGAATAA
Predicted protein sequences of Glyma06g36910
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma06g36910.1 sequence type=predicted peptide gene model=Glyma06g36910 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MSSDALKVAAEGNNIDGLYQEIQQDPRILESIDSIPFVETPLHVAATLGHFEFATEIMTLKPSFAQKLNPEGFTPIHLALQCNHDEMVLRLVEMNKDLVRVKGREGFTPLHLASQENKTELLHKFLKACPDSIEDVTARSETALHIAVKHGHYEILQVLFRWLKRNSRKDSLKFIRTMLNWKDQKGNTVVHVAALNDHIEAVSLLLTMVDLDAKNSEGKTASDIASSDHMKSILIKDLGFFESLALLRNKFRNFFLRFRRYMTEEERNAYLVVAALIATATYQAALSPPGGLYPSDVGTNNNTSHVVASTHSINDKSSIPKDGNSIMSATEFSLFSVANTCSFMSSTFAIILLLPMTNVMWILLYSPPFFLQLSFFIAMMVISPTPLNVYVVTIFLAVYMLLFYSFLPFTYYKLLE*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
