SoyBase
SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
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A newer version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT4G16710 | AT | Annotation by Michelle Graham. TAIR10: glycosyltransferase family protein 28 | chr4:9398818-9399618 FORWARD LENGTH=176 | SoyBase | E_val: 3.00E-87 | ISS |
| GO:0005975 | GO-bp | Annotation by Michelle Graham. GO Biological Process: carbohydrate metabolic process | SoyBase | N/A | ISS |
| GO:0009058 | GO-bp | Annotation by Michelle Graham. GO Biological Process: biosynthetic process | SoyBase | N/A | ISS |
| GO:0030259 | GO-bp | Annotation by Michelle Graham. GO Biological Process: lipid glycosylation | SoyBase | N/A | ISS |
| GO:0005886 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane | SoyBase | N/A | ISS |
| GO:0016757 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring glycosyl groups | SoyBase | N/A | ISS |
| GO:0016758 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring hexosyl groups | SoyBase | N/A | ISS |
| GO:0030246 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: carbohydrate binding | SoyBase | N/A | ISS |
| KOG3349 | KOG | Predicted glycosyltransferase | JGI | ISS | |
| PTHR12867 | Panther | GLYCOSYL TRANSFERASE-RELATED | JGI | ISS | |
| PF04101 | PFAM | Glycosyltransferase family 28 C-terminal domain | JGI | ISS | |
| UniRef100_G7JC52 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: UDP-N-acetylglucosamine transferase subunit ALG13-like protein n=1 Tax=Medicago truncatula RepID=G7JC52_MEDTR | SoyBase | E_val: 2.00E-104 | ISS |
| UniRef100_I1KDU9 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1KDU9_SOYBN | SoyBase | E_val: 2.00E-127 | ISS |
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Glyma06g36690 not represented in the dataset |
Glyma06g36690 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|---|---|---|
| Glyma.06g240600 | Wm82.a2.v1 | IGC | As supplied by JGI |
| Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma06g36690.4 sequence type=transcript gene model=Glyma06g36690 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high CGCCAATTTGGGAGCCGCTATAGATCGGCTTCACACACGGCGGCGCTCCGATTCTCCGACACACTGTCGCTCACCGCTTCACTCTCTCACAAATTGACCGAATCATCTTGCTGTCTCTGGTGTCACTACAAGGGAGGGAAGACTATAATTGAATTGAATCGAGTGGGTGTTGCTAAATGGGGAACGATGAAGGCAATGATAAGAAAAAGAGAGTGGTTTTTGTGACTGTAGGGACAACCTGTTTCGATGCTCTTGTGAGAGCTGTGGATTCCAACAATGTTAAACAAGCCTTGTTTGCAAAAGGCTACACCCACCTTCTCATCCAAATGGGTCGTGGATCCTATCTTCCTACTAAGTCTGAAGGAGATGGTTCTTTGGCTGTAGACTACTTCACTTTTTCATCCAGTATTGCAGATCATCTCAGATCAGCTTCTCTTGTCATTAGCCATGCAGGGTCGGGTAGCATATTTGAGACATTGCAGCTGGGCAAACCTTTAATTGTGGTTGTAAATGAAGATTTGATGGATAATCATCAAAGTGAGTTAGCAGAAGAACTTGCTGATAGAAAACATCTGTATTGTGCTAGTCCTCAAACACTCCATCAAACTATAGCAAATATGGATTTAAGTTCTCTCTTTCCTTACTCTCCAGGTGATGCTACACCAGTGGCCAAGCATATAAACAATCTCCTTGGTTTTCCTGATGATTGATCTAAAGCCTTTTTCTCCCCTCTATCTCTAGGGTTAAAAGTCTTTGTGAGGGATGATAATCATTTTATGTAATATTTGGATCCCCTAAATATTCAGTCTTAAATGTTGAATTGAATATCATGTCGATGCAAGCAATATATATACAGGATTAAAAAAAAACGTTTTTGAGATT >Glyma06g36690.5 sequence type=transcript gene model=Glyma06g36690 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high TAAAAAAAAAAAAAATACCCCCAGTAAATTGGGCTGCACCAGTTAACTGAAACATTGAGCATTTCGAAATCCCCATAGCTTCACCGCCAATTTGGGAGCCGCTATAGATCGGCTTCACACACGGCGGCGCTCCGATTCTCCGACACACTGTCGCTCACCGCTTCACTCTCTCACAAATTGACCGAATCATCGCTAGTTGCTGTCTCTGGTGTCACTACAAGGGAGGGAAGACTATAATTGAATTGAATCGAGTGGGTGTTGCTAAATGGGGAACGATGAAGGCAATGATAAGAAAAAGAGAGTGGTTTTTGTGACTGTAGGGACAACCTGTTTCGATGCTCTTGTGAGAGCTGTGGATTCCAACAATGTTAAACAAGCCTTGTTTGCAAAAGGCTACACCCACCTTCTCATCCAAATGGGTCGTGGATCCTATCTTCCTACTAAGTCTGAAGGAGATGGTTCTTTGGCTGTAGACTACTTCACTTTTTCATCCAGTATTGCAGATCATCTCAGATCAGCTTCTCTTGTCATTAGCCATGCAGGGTCGGGTAGCATATTTGAGACATTGCAGCTGGGCAAACCTTTAATTGTGGTTGTAAATGAAGATTTGATGGATAATCATCAAAGTGAGTTAGCAGAAGAACTTGCTGATAGAAAACATCTGTATTGTGCTAGTCCTCAAACACTCCATCAAACTATAGCAAATATGGATTTAAGTTCTCTCTTTCCTTACTCTCCAGGTGATGCTACACCAGTGGCCAAGCATATAAACAATCTCCTTGGTTTTCCTGATGATTGATCTAAAGCCTTTTTCTCCCCTCTATCTCTAGGGTTAAAAGTCTTTGTGAGGGATGATAATCATTTTATGTAATATTTGGATCCCCTAAATATTCAGTCTTAAATGTTGAATTGAATATCATGTCGATGCAAGCAATATATATACAGGATTAAAAAAAAACGTTTTTGAGATTAAAAATT
>Glyma06g36690.2 sequence type=CDS gene model=Glyma06g36690 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGGGAACGATGAAGGCAATGATAAGAAAAAGAGAGTGGTTTTTGTGACTGTAGGGACAACCTGTTTCGATGCTCTTGTGAGAGCTGTGGATTCCAACAATGTTAAACAAGCCTTGTTTGCAAAAGGCTACACCCACCTTCTCATCCAAATGGGTCGTGGATCCTATCTTCCTACTAAGTCTGAAGGAGATGGTTCTTTGGCTGTAGACTACTTCACTTTTTCATCCAGTATTGCAGATCATCTCAGATCAGCTTCTCTTGTCATTAGCCATGCAGGGTCGGGTAGCATATTTGAGACATTGCAGCTGGGCAAACCTTTAATTGTGGTTGTAAATGAAGATTTGATGGATAATCATCAAAGTGAGTTAGCAGAAGAACTTGCTGATAGAAAACATCTGTATTGTGCTAGTCCTCAAACACTCCATCAAACTATAGCAAATATGGATTTAAGTTCTCTCTTTCCTTACTCTCCAGGTGATGCTACACCAGTGGCCAAGCATATAAACAATCTCCTTGGTTTTCCTGATGATTGA >Glyma06g36690.4 sequence type=CDS gene model=Glyma06g36690 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGGGAACGATGAAGGCAATGATAAGAAAAAGAGAGTGGTTTTTGTGACTGTAGGGACAACCTGTTTCGATGCTCTTGTGAGAGCTGTGGATTCCAACAATGTTAAACAAGCCTTGTTTGCAAAAGGCTACACCCACCTTCTCATCCAAATGGGTCGTGGATCCTATCTTCCTACTAAGTCTGAAGGAGATGGTTCTTTGGCTGTAGACTACTTCACTTTTTCATCCAGTATTGCAGATCATCTCAGATCAGCTTCTCTTGTCATTAGCCATGCAGGGTCGGGTAGCATATTTGAGACATTGCAGCTGGGCAAACCTTTAATTGTGGTTGTAAATGAAGATTTGATGGATAATCATCAAAGTGAGTTAGCAGAAGAACTTGCTGATAGAAAACATCTGTATTGTGCTAGTCCTCAAACACTCCATCAAACTATAGCAAATATGGATTTAAGTTCTCTCTTTCCTTACTCTCCAGGTGATGCTACACCAGTGGCCAAGCATATAAACAATCTCCTTGGTTTTCCTGATGATTGA >Glyma06g36690.5 sequence type=CDS gene model=Glyma06g36690 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGGGAACGATGAAGGCAATGATAAGAAAAAGAGAGTGGTTTTTGTGACTGTAGGGACAACCTGTTTCGATGCTCTTGTGAGAGCTGTGGATTCCAACAATGTTAAACAAGCCTTGTTTGCAAAAGGCTACACCCACCTTCTCATCCAAATGGGTCGTGGATCCTATCTTCCTACTAAGTCTGAAGGAGATGGTTCTTTGGCTGTAGACTACTTCACTTTTTCATCCAGTATTGCAGATCATCTCAGATCAGCTTCTCTTGTCATTAGCCATGCAGGGTCGGGTAGCATATTTGAGACATTGCAGCTGGGCAAACCTTTAATTGTGGTTGTAAATGAAGATTTGATGGATAATCATCAAAGTGAGTTAGCAGAAGAACTTGCTGATAGAAAACATCTGTATTGTGCTAGTCCTCAAACACTCCATCAAACTATAGCAAATATGGATTTAAGTTCTCTCTTTCCTTACTCTCCAGGTGATGCTACACCAGTGGCCAAGCATATAAACAATCTCCTTGGTTTTCCTGATGATTGA
>Glyma06g36690.2 sequence type=predicted peptide gene model=Glyma06g36690 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MGNDEGNDKKKRVVFVTVGTTCFDALVRAVDSNNVKQALFAKGYTHLLIQMGRGSYLPTKSEGDGSLAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLQLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCASPQTLHQTIANMDLSSLFPYSPGDATPVAKHINNLLGFPDD* >Glyma06g36690.4 sequence type=predicted peptide gene model=Glyma06g36690 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MGNDEGNDKKKRVVFVTVGTTCFDALVRAVDSNNVKQALFAKGYTHLLIQMGRGSYLPTKSEGDGSLAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLQLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCASPQTLHQTIANMDLSSLFPYSPGDATPVAKHINNLLGFPDD* >Glyma06g36690.5 sequence type=predicted peptide gene model=Glyma06g36690 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MGNDEGNDKKKRVVFVTVGTTCFDALVRAVDSNNVKQALFAKGYTHLLIQMGRGSYLPTKSEGDGSLAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLQLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCASPQTLHQTIANMDLSSLFPYSPGDATPVAKHINNLLGFPDD*
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||
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