Glyma06g36610 - SoyBase

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Report for Sequence Feature Glyma06g36610

Feature Type:	gene_model
Chromosome:	Gm06
Start:	38888366
stop:	38901333
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma06g36610

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT2G44760	AT	Annotation by Michelle Graham. TAIR10: Domain of unknown function (DUF3598) \| chr2:18452937-18454785 REVERSE LENGTH=500	SoyBase	E_val: 0	ISS
GO:0008150	GO-bp	Annotation by Michelle Graham. GO Biological Process: biological process	SoyBase	N/A	ISS
GO:0009507	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: chloroplast	SoyBase	N/A	ISS
GO:0003674	GO-mf	Annotation by Michelle Graham. GO Molecular Function: molecular function	SoyBase	N/A	ISS
PF12204	PFAM	Domain of unknown function (DUF3598)	JGI		ISS
UniRef100_I1KDU2	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1KDU2_SOYBN	SoyBase	E_val: 0	ISS
UniRef100_Q01J23	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: OSIGBa0101C23.4 protein n=1 Tax=Oryza sativa RepID=Q01J23_ORYSA	SoyBase	E_val: 6.00E-178	ISS

Expression Patterns of Glyma06g36610

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma06g36610 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.06g240000	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma06g36610

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma06g36610

Limit To All Plant Sequences

>Glyma06g36610.1   sequence type=CDS   gene model=Glyma06g36610   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGCAATCTCCTTCTTCCCTTTACCTCAACAAGAACTTCTTCACCACACACCATCACCACCTTGGCTTCCACCACACCCTCTCTTCCACCCACAATTCCCTTACCTCTCTTGGCTTCTCGCCCAAGCCATCATGTTCCACGAGGCTTATAACAGCTCAAGCTTACAGGCCCAACAATCACAAGAGGAATGGTTCCCCCAAAGAGGGTGCGAGGGTGAGGGGCAGCAAGGACAACATGTGGAGTATTGACAATGAGCTTGCCAAGGCGTCTTCTTCTCAGAAGGAGAAAAGGAGGAGGCAGAGAGGGAGGAGTGTGGTGAGGAGGAAGGGCCCAAAGGGTGGAAGGGTTATTGTCTCTGGGGCTATGCTGCTGGAGGTTGAGACTGTTCTTCAGACTCTGGAACCAGTTATAAAACCAATTTGGAATACATTTACTAGCAGTCTCAGTGGAATTTGGAAGGGTGTAGGTGCTGTGTTTTCTCCCATCACAGCTGAAATGGAACCAATGGAAATAGGTAGCAAGAATGAACATCTATATGACTGCTATACTCTTTCCCGCATAGAGGTAGTACCATCAGTTTCAGGTGAGCATACATCTCAAATCCAGAGAAAGGTTAACTGGGTGACTTTGAATCCTTATGGTGAAATACCACAGCATATTAAAGGCAGCAATGTAGCCAAAGATGGGCAGCACAAATCCAGCGTTAATGTAATAAATCATGTTTTGCCTACATTTGAATCGTTTGACTTTAAAAGGAGTGATGTGATGGAAGAAGATGTCATGGGCTGTGAACCAGGCCTTGTTTACTTTGAAGACGGGTCATATTCTCGAGGTCCTATAGATATTCCAGTGGGTGAATACAATGATACAAAATACTATATCTCACCAACTTTCAAGTTCGAACAATGCTTGGTTAAAGGCTGCCACAAAAGGATCCGAATTGTCCACACCATAGAATTCATCAATGGTGGTTCAGATATACAGATATTGAGAGTCGCCGTGTATGAAGAAGAATGGGCCAGTCCTGCTTCCATTGATTACCAAAGTGACATGGAGTTCGACGCAAAGCCATTTTCACAAAGAAAACGAACCAAGCCATCAGAGCTAACAGGGTCATGGAAAGTCTTTGAGGTAAGTGCAACTCCCGTGTACGATGAGGAGAGCACGGCAGAAGAAGGCAATGCTGCCCCGTACATGTACTTTTGTATGGAAAATCTAAAGAAGAGGAGCCTCCCCAAGAACACTGACTACTTTGGCGAGGAGGAGCGGCTTGACATGCAGGATGTGACCATGCTATGGCTTCCTGGAGGCGTGACATGCTATGTTGACATTAACAAGCATGGCATTGGAGTTGGTTGGTACTCTGATGAAGGGATCAACCTTGTGATGGAGAGAGACTATGGGTTGGATGGAAAGCTCAAAGAGGTGAGATGGAAATCAGAGGTGAAAAGAAGGTGGTCTAGTCCTCCTCCTATTGAATAA

Predicted protein sequences of Glyma06g36610

Limit To All Plant Sequences

>Glyma06g36610.1   sequence type=predicted peptide   gene model=Glyma06g36610   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MQSPSSLYLNKNFFTTHHHHLGFHHTLSSTHNSLTSLGFSPKPSCSTRLITAQAYRPNNHKRNGSPKEGARVRGSKDNMWSIDNELAKASSSQKEKRRRQRGRSVVRRKGPKGGRVIVSGAMLLEVETVLQTLEPVIKPIWNTFTSSLSGIWKGVGAVFSPITAEMEPMEIGSKNEHLYDCYTLSRIEVVPSVSGEHTSQIQRKVNWVTLNPYGEIPQHIKGSNVAKDGQHKSSVNVINHVLPTFESFDFKRSDVMEEDVMGCEPGLVYFEDGSYSRGPIDIPVGEYNDTKYYISPTFKFEQCLVKGCHKRIRIVHTIEFINGGSDIQILRVAVYEEEWASPASIDYQSDMEFDAKPFSQRKRTKPSELTGSWKVFEVSATPVYDEESTAEEGNAAPYMYFCMENLKKRSLPKNTDYFGEEERLDMQDVTMLWLPGGVTCYVDINKHGIGVGWYSDEGINLVMERDYGLDGKLKEVRWKSEVKRRWSSPPPIE*

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