Glyma06g36520 - SoyBase

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Report for Sequence Feature Glyma06g36520

Feature Type:	gene_model
Chromosome:	Gm06
Start:	38675850
stop:	38677885
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma06g36520

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT3G50740	AT	Annotation by Michelle Graham. TAIR10: UDP-glucosyl transferase 72E1 \| chr3:18855348-18856811 REVERSE LENGTH=487	SoyBase	E_val: 1.00E-156	ISS
GO:0006520	GO-bp	Annotation by Michelle Graham. GO Biological Process: cellular amino acid metabolic process	SoyBase	N/A	ISS
GO:0006569	GO-bp	Annotation by Michelle Graham. GO Biological Process: tryptophan catabolic process	SoyBase	N/A	ISS
GO:0008152	GO-bp	Annotation by Michelle Graham. GO Biological Process: metabolic process	SoyBase	N/A	ISS
GO:0009684	GO-bp	Annotation by Michelle Graham. GO Biological Process: indoleacetic acid biosynthetic process	SoyBase	N/A	ISS
GO:0009808	GO-bp	Annotation by Michelle Graham. GO Biological Process: lignin metabolic process	SoyBase	N/A	ISS
GO:0010167	GO-bp	Annotation by Michelle Graham. GO Biological Process: response to nitrate	SoyBase	N/A	ISS
GO:0015706	GO-bp	Annotation by Michelle Graham. GO Biological Process: nitrate transport	SoyBase	N/A	ISS
GO:0008194	GO-mf	Annotation by Michelle Graham. GO Molecular Function: UDP-glycosyltransferase activity	SoyBase	N/A	ISS
GO:0016757	GO-mf	Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring glycosyl groups	SoyBase	N/A	ISS
GO:0016758	GO-mf	Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring hexosyl groups	SoyBase	N/A	ISS
GO:0047209	GO-mf	Annotation by Michelle Graham. GO Molecular Function: coniferyl-alcohol glucosyltransferase activity	SoyBase	N/A	ISS
KOG1192	KOG	UDP-glucuronosyl and UDP-glucosyl transferase	JGI		ISS
PTHR11926	Panther	GLUCOSYL/GLUCURONOSYL TRANSFERASES	JGI		ISS
PTHR11926:SF15	Panther	UDP-GLUCURONOSYLTRANSFERASE RELATED	JGI		ISS
PF00201	PFAM	UDP-glucoronosyl and UDP-glucosyl transferase	JGI		ISS
UniRef100_G7LA90	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Anthocyanidin 3-O-glucosyltransferase n=1 Tax=Medicago truncatula RepID=G7LA90_MEDTR	SoyBase	E_val: 0	ISS
UniRef100_I1KDT9	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1KDT9_SOYBN	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma06g36520

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma06g36520 not represented in the dataset	Glyma06g36520 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma06g36520 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.06g239500	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma06g36520

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma06g36520

Limit To All Plant Sequences

>Glyma06g36520.1   sequence type=CDS   gene model=Glyma06g36520   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGAACTGCAAAAACCCACTCACGTGGCTCTTCTCTCGAGCCCTGGTCTGGGTCATCTTATCCCAACGATTGAGCTTGGGAAGCGCTTCGTTCTTAACCACAACTTCAAAGTCACTGTTCTCGCGGTTACTTCGCAAACCTCACGCGCCGAAACTCAGATTCTGAACTCAGCCCTCACACCCTCCCTTTGCAACGTCATCAACATCCCTTCACCAGACCTCACCGGCCTCATCCACCAAAACGACCGCATGCTCACGCGCCTCTGCGTCATGATGCGCCAAGCCCTACCCACCATTAAATCCATTCTTTCCGAAATTACCCCTCGCCCCTCAGCACTCATAGTTGACATATTCGGCACCGAGGCTATTCCAATAGGGAGGAAACTCAACATTCCAAACTACGTCTACGTGGCATCACAGGCTTGGTTCCTGTCGTTGCTCGTGTATTCTCCTATTCTCGATGAGAAAATAGAAGGGGAATACGTTGACCAAAAGGAAGCGTTGAAAATCCCGGGTTGCAACCCGGTTCGACCGGAGGACGTGGTGGACCAGATGCTAGACCGGAACGACAGAGAGTATAAAGAGTATCTTGGAGTAGGGAAGGGGATCCCGCAAAGCGACGGCATTTTGGTGAACACGTGGGAGGAGCTTCAACGTAAAGACCTTGAAGCGTTGAGGGAGGGAGGTTTGTTAAGTGAGGCACTGAATATGAACATTCCAGTATATGCTGTGGGACCTTTAGTGAGGGAACCGGAGTTAGAAACAAGTTCTGTGACTAAGTCGCTGCTGACGTGGCTCGATGAACAACCGAGCGAATCGGTGGTTTACGTGTCGTTTGGGAGCGGAGGAACGATGTCGTATGAGCAGATGACGGAATTGGCTTGGGGGCTGGAGTTGAGTGAGTGGAGATTTGTTTGGGTGGTGCGCGCGCCCATGGAAGGAACTGCGGACGCTGCGTTTTTCACTACTGGGAGTGATGGGGTTGATGAGGTGGCCAAGTATTTGCCAGAAGGGTTTGTATCGAGAACCCGCAAAGTGGGACTGTTGGTTCCGGAGTGGGCCCAACAGGTAACAATACTGAAGCATCGTTCTATTGGGGGTTTTCTTTCGCATTGTGGATGGGGTTCGACGCTTGAGAGCGTAACGAATGGTATTCCCTTGATCGCGTGGCCGCTGTACGCAGAGCAGAGGATGAACGCGACGTTGCTGGCGGAGGAGTTGGGCCTTGCGGTGAGGACCACGGTGTTGCCGACGAAGAAGGTTGTGCGTAGGGAAGAGATAGCGCGGATGGTGAGGGAGGTTCTTCAGGGTGATGAAAATGTGAAGAGCAATGGCATAAGGGAGAGAGTGAAAGAGGTGCAACGAAGTGCAGTGAATGCTTTGTCGGAAGGTGGTTCGTCCTATGTTGCTCTCTCTCACGTGGCAAAAACAATTCAAGGATAA

Predicted protein sequences of Glyma06g36520

Limit To All Plant Sequences

>Glyma06g36520.1   sequence type=predicted peptide   gene model=Glyma06g36520   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MELQKPTHVALLSSPGLGHLIPTIELGKRFVLNHNFKVTVLAVTSQTSRAETQILNSALTPSLCNVINIPSPDLTGLIHQNDRMLTRLCVMMRQALPTIKSILSEITPRPSALIVDIFGTEAIPIGRKLNIPNYVYVASQAWFLSLLVYSPILDEKIEGEYVDQKEALKIPGCNPVRPEDVVDQMLDRNDREYKEYLGVGKGIPQSDGILVNTWEELQRKDLEALREGGLLSEALNMNIPVYAVGPLVREPELETSSVTKSLLTWLDEQPSESVVYVSFGSGGTMSYEQMTELAWGLELSEWRFVWVVRAPMEGTADAAFFTTGSDGVDEVAKYLPEGFVSRTRKVGLLVPEWAQQVTILKHRSIGGFLSHCGWGSTLESVTNGIPLIAWPLYAEQRMNATLLAEELGLAVRTTVLPTKKVVRREEIARMVREVLQGDENVKSNGIRERVKEVQRSAVNALSEGGSSYVALSHVAKTIQG*

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