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Report for Sequence Feature Glyma06g36520

Feature Type:gene_model
Chromosome:Gm06
Start:38675850
stop:38677885
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma06g36520
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G50740AT Annotation by Michelle Graham. TAIR10: UDP-glucosyl transferase 72E1 | chr3:18855348-18856811 REVERSE LENGTH=487 SoyBaseE_val: 1.00E-156ISS
GO:0006520GO-bp Annotation by Michelle Graham. GO Biological Process: cellular amino acid metabolic process SoyBaseN/AISS
GO:0006569GO-bp Annotation by Michelle Graham. GO Biological Process: tryptophan catabolic process SoyBaseN/AISS
GO:0008152GO-bp Annotation by Michelle Graham. GO Biological Process: metabolic process SoyBaseN/AISS
GO:0009684GO-bp Annotation by Michelle Graham. GO Biological Process: indoleacetic acid biosynthetic process SoyBaseN/AISS
GO:0009808GO-bp Annotation by Michelle Graham. GO Biological Process: lignin metabolic process SoyBaseN/AISS
GO:0010167GO-bp Annotation by Michelle Graham. GO Biological Process: response to nitrate SoyBaseN/AISS
GO:0015706GO-bp Annotation by Michelle Graham. GO Biological Process: nitrate transport SoyBaseN/AISS
GO:0008194GO-mf Annotation by Michelle Graham. GO Molecular Function: UDP-glycosyltransferase activity SoyBaseN/AISS
GO:0016757GO-mf Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring glycosyl groups SoyBaseN/AISS
GO:0016758GO-mf Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring hexosyl groups SoyBaseN/AISS
GO:0047209GO-mf Annotation by Michelle Graham. GO Molecular Function: coniferyl-alcohol glucosyltransferase activity SoyBaseN/AISS
KOG1192 KOG UDP-glucuronosyl and UDP-glucosyl transferase JGI ISS
PTHR11926Panther GLUCOSYL/GLUCURONOSYL TRANSFERASES JGI ISS
PTHR11926:SF15Panther UDP-GLUCURONOSYLTRANSFERASE RELATED JGI ISS
PF00201PFAM UDP-glucoronosyl and UDP-glucosyl transferase JGI ISS
UniRef100_G7LA90UniRef Annotation by Michelle Graham. Most informative UniRef hit: Anthocyanidin 3-O-glucosyltransferase n=1 Tax=Medicago truncatula RepID=G7LA90_MEDTR SoyBaseE_val: 0ISS
UniRef100_I1KDT9UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1KDT9_SOYBN SoyBaseE_val: 0ISS

Expression Patterns of Glyma06g36520
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma06g36520 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.06g239500 Wm82.a2.v1IGC As supplied by JGI

References for Glyma06g36520
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma06g36520
>Glyma06g36520.1   sequence type=CDS   gene model=Glyma06g36520   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGAACTGCAAAAACCCACTCACGTGGCTCTTCTCTCGAGCCCTGGTCTGGGTCATCTTATCCCAACGATTGAGCTTGGGAAGCGCTTCGTTCTTAACCACAACTTCAAAGTCACTGTTCTCGCGGTTACTTCGCAAACCTCACGCGCCGAAACTCAGATTCTGAACTCAGCCCTCACACCCTCCCTTTGCAACGTCATCAACATCCCTTCACCAGACCTCACCGGCCTCATCCACCAAAACGACCGCATGCTCACGCGCCTCTGCGTCATGATGCGCCAAGCCCTACCCACCATTAAATCCATTCTTTCCGAAATTACCCCTCGCCCCTCAGCACTCATAGTTGACATATTCGGCACCGAGGCTATTCCAATAGGGAGGAAACTCAACATTCCAAACTACGTCTACGTGGCATCACAGGCTTGGTTCCTGTCGTTGCTCGTGTATTCTCCTATTCTCGATGAGAAAATAGAAGGGGAATACGTTGACCAAAAGGAAGCGTTGAAAATCCCGGGTTGCAACCCGGTTCGACCGGAGGACGTGGTGGACCAGATGCTAGACCGGAACGACAGAGAGTATAAAGAGTATCTTGGAGTAGGGAAGGGGATCCCGCAAAGCGACGGCATTTTGGTGAACACGTGGGAGGAGCTTCAACGTAAAGACCTTGAAGCGTTGAGGGAGGGAGGTTTGTTAAGTGAGGCACTGAATATGAACATTCCAGTATATGCTGTGGGACCTTTAGTGAGGGAACCGGAGTTAGAAACAAGTTCTGTGACTAAGTCGCTGCTGACGTGGCTCGATGAACAACCGAGCGAATCGGTGGTTTACGTGTCGTTTGGGAGCGGAGGAACGATGTCGTATGAGCAGATGACGGAATTGGCTTGGGGGCTGGAGTTGAGTGAGTGGAGATTTGTTTGGGTGGTGCGCGCGCCCATGGAAGGAACTGCGGACGCTGCGTTTTTCACTACTGGGAGTGATGGGGTTGATGAGGTGGCCAAGTATTTGCCAGAAGGGTTTGTATCGAGAACCCGCAAAGTGGGACTGTTGGTTCCGGAGTGGGCCCAACAGGTAACAATACTGAAGCATCGTTCTATTGGGGGTTTTCTTTCGCATTGTGGATGGGGTTCGACGCTTGAGAGCGTAACGAATGGTATTCCCTTGATCGCGTGGCCGCTGTACGCAGAGCAGAGGATGAACGCGACGTTGCTGGCGGAGGAGTTGGGCCTTGCGGTGAGGACCACGGTGTTGCCGACGAAGAAGGTTGTGCGTAGGGAAGAGATAGCGCGGATGGTGAGGGAGGTTCTTCAGGGTGATGAAAATGTGAAGAGCAATGGCATAAGGGAGAGAGTGAAAGAGGTGCAACGAAGTGCAGTGAATGCTTTGTCGGAAGGTGGTTCGTCCTATGTTGCTCTCTCTCACGTGGCAAAAACAATTCAAGGATAA
Predicted protein sequences of Glyma06g36520
>Glyma06g36520.1   sequence type=predicted peptide   gene model=Glyma06g36520   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MELQKPTHVALLSSPGLGHLIPTIELGKRFVLNHNFKVTVLAVTSQTSRAETQILNSALTPSLCNVINIPSPDLTGLIHQNDRMLTRLCVMMRQALPTIKSILSEITPRPSALIVDIFGTEAIPIGRKLNIPNYVYVASQAWFLSLLVYSPILDEKIEGEYVDQKEALKIPGCNPVRPEDVVDQMLDRNDREYKEYLGVGKGIPQSDGILVNTWEELQRKDLEALREGGLLSEALNMNIPVYAVGPLVREPELETSSVTKSLLTWLDEQPSESVVYVSFGSGGTMSYEQMTELAWGLELSEWRFVWVVRAPMEGTADAAFFTTGSDGVDEVAKYLPEGFVSRTRKVGLLVPEWAQQVTILKHRSIGGFLSHCGWGSTLESVTNGIPLIAWPLYAEQRMNATLLAEELGLAVRTTVLPTKKVVRREEIARMVREVLQGDENVKSNGIRERVKEVQRSAVNALSEGGSSYVALSHVAKTIQG*






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