Report for Sequence Feature Glyma06g36150
Feature Type: gene_model
Chromosome: Gm06
Start: 38218484
stop: 38222611
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma06g36150
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT3G15260 AT
Annotation by Michelle Graham. TAIR10: Protein phosphatase 2C family protein | chr3:5138842-5140242 FORWARD LENGTH=289
SoyBase E_val: 1.00E-163 ISS
GO:0003824 GO-mf
Annotation by Michelle Graham. GO Molecular Function: catalytic activity
SoyBase N/A ISS
GO:0004722 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein serine/threonine phosphatase activity
SoyBase N/A ISS
KOG0698
KOG
Serine/threonine protein phosphatase
JGI ISS
PTHR13832 Panther
PROTEIN PHOSPHATASE 2C
JGI ISS
PTHR13832:SF144 Panther
SUBFAMILY NOT NAMED
JGI ISS
PF00481 PFAM
Protein phosphatase 2C
JGI ISS
UniRef100_I1KDS9 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Glycine max RepID=I1KDS9_SOYBN
SoyBase E_val: 0 ISS
UniRef100_Q9ZPL8 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Protein phosphatase type 2C n=1 Tax=Lotus japonicus RepID=Q9ZPL8_LOTJA
SoyBase E_val: 3.00E-177 ISS
Expression Patterns of Glyma06g36150
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Paralogs of Glyma06g36150
Paralog Evidence Comments
Glyma12g27340 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma06g36150 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.06g238200 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma06g36150
Coding sequences of Glyma06g36150
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma06g36150.2 sequence type=CDS gene model=Glyma06g36150 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGACGGGCAGGGAAATTTTTCATAAGATGAAGGAAAAAGTTTTGGGCTCATCTGATCCTGATTCTGGTAAAGGAAAGAGCAAGATGAAGAAGAACATAACTCATGGCTTTCACTTGGTAAAGGGGAGATCAGGTCATGCCATGGAAGACTATCTTGTTGCTCAATTCAAGCAAGTTGACGACAATGAATTGGGTTTATTTGCAATATTTGATGGCCACTCAGGTCACAGTGTACCTGATTACTTGAAGTCTCATTTGTTTGATAATATCTTGAAAGAGCCTAACTTCTGGACAGAACCTGCTGAGGCTGTTAAGAGAGCATATGGTATAACTGATTCTACTATTTTAGACAAATCAGGTGAATTGGGTAGAGGGGGTTCAACTGCGGTTACTGCAATATTGATCAACTGTCAGGAGCTGCTAGTGGCCAATATTGGGGATTCCCGGGCTGTCTTATGCAAGAATGGCGTGGCCAAACAACTATCAGTGGATCATGAACCAAGCATAGAAAGTGAAGATATAAGAAACAGAGGTGGTTTTGTGTCAAACTTCCCAGGGGATGTTCCACGTGTCGATGGTCAGTTGGCGGTGTCAAGGGCATTTGGTGACAAAAGCCTGAAGATACATTTGAGCTCAGAACCATATGTAACTTTGGAGATGATAGAAGATGATGCAGAGTTTCTTATACTAGCCAGTGATGGGTTATGGAAGGTAATGTCAAATCAAGAAGCAGTTAGTGCTATCAAAGATGTTAAGGATGCCAGGTCCGCAGCTAAGGTGCTTACCGAAGAAGCAAAGATCAGGAAAAGTTCTGATGATATCTCTTGCGTTGTTGTGAAATTTCAGTGA
Predicted protein sequences of Glyma06g36150
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma06g36150.2 sequence type=predicted peptide gene model=Glyma06g36150 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MTGREIFHKMKEKVLGSSDPDSGKGKSKMKKNITHGFHLVKGRSGHAMEDYLVAQFKQVDDNELGLFAIFDGHSGHSVPDYLKSHLFDNILKEPNFWTEPAEAVKRAYGITDSTILDKSGELGRGGSTAVTAILINCQELLVANIGDSRAVLCKNGVAKQLSVDHEPSIESEDIRNRGGFVSNFPGDVPRVDGQLAVSRAFGDKSLKIHLSSEPYVTLEMIEDDAEFLILASDGLWKVMSNQEAVSAIKDVKDARSAAKVLTEEAKIRKSSDDISCVVVKFQ*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
