Report for Sequence Feature Glyma06g36050
Feature Type: gene_model
Chromosome: Gm06
Start: 38046399
stop: 38053454
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma06g36050
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT4G10720 AT
Annotation by Michelle Graham. TAIR10: Ankyrin repeat family protein | chr4:6607879-6609358 FORWARD LENGTH=445
SoyBase E_val: 3.00E-75 ISS
GO:0008150 GO-bp
Annotation by Michelle Graham. GO Biological Process: biological process
SoyBase N/A ISS
GO:0005575 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: cellular component
SoyBase N/A ISS
PTHR24198 Panther
ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAININ
JGI ISS
PTHR24198:SF302 Panther
JGI ISS
UniRef100_G7L8Q1 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Ankyrin repeat protein n=1 Tax=Medicago truncatula RepID=G7L8Q1_MEDTR
SoyBase E_val: 4.00E-151 ISS
UniRef100_I1KDS0 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein (Fragment) n=1 Tax=Glycine max RepID=I1KDS0_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma06g36050
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Gene model name correspondences to Glyma06g36050 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.06g237400 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma06g36050
Coding sequences of Glyma06g36050
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma06g36050.2 sequence type=CDS gene model=Glyma06g36050 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGAACACGACAAGAGAAGATAGGTCAAGAGTTAACCTTGCTGCTCAAGAGGGAGACATAGATGGCCTCTACACAGTGATTCAGGAAAATCCACATGTTTTGGAAGACATAGATTCAATTCCATTTGTTGACACTCCTTTGCATGTTGCTGCTTCGGTTGGACATCTCCGATTTGTTACCGAAGTTATGAGGTTGAAACCTTCCTTTGCTTGGAAACAAAATCCAGAAGGATTGACTCCCATCCATCTTGCTCTACAACACGGCCATGATAACGTGGTTCTTCGCCTTGTATCCATAAACAATGACCTCGTCCGAGCCAAAGGGAGGAAAGGTCGTACTCCACTGCATTTGGCAAGTAAAAAAGGAGAAATTGACCTTTTGACAAAATTCCTCTTGGCTTGTCCAAATTGCATTGAAGATGTAACAGTTAAAAGTGAGACTGCACTGCATATTGCAGTCAGATGTGGGCAATTCGAGGCTCTCCAAGCGCTTCAATTGTTGCTAAAGACTAAAGTGGATTTGAAGGCCAAGAATTTGGAGAACTCAACAGCACTAGATGTAGTAACTAGCGCAGAGATAAGGAATGCATTAGTTAAGGCTGGTGCAAAACAAGGTTCATCAGTTACTAATGCTCCCACCCTTGCAGATAAACTAAGATGGAACATCACACTCATGGGAAAAATAACTATATTTGTACTTCGCATTAGAAGCGACATAACAGAGGACCAACGCCAAGCTTTTCTCATAGTTGCTGCTCTTATTGCAACCGCAACTTATCAATCAGCACTAAGTCCCCCTGGTGGAGTTTTTCAGGCTAATGCTGGAAACAATAATAATAATAATGTTAATATCACTTCCCTCAATTCTACTACTATTGCTACCCAAGGAATTAATGTTGGGACTTCTGTCATTTCTGAAGGTGATTTCTTGACCTTATCGATTTTCAATTCACTTTCTCTTTTGACTTCAACCGTAACAATGTATATTCTCACGCCAAGTGGGATAGTGGGTACTATATTGTTCACGCCAATGTTTTGGTTTGCCTACTGCTATCTATATTCTATAAGGGTAATATCCCCGACTAATGCTACCAAATATTTCAATTTGATTATGCTGTGTTTATTCTTCTTCTTGTACTCGGGAGTATGGTGGACATTTTCCATAGTGTACAAGAGACTTAAGTGTCATGAAAAGAAGAGGGATATTGGAACAAGGAATAGTACAGGAAGAAATATATGGTAG
Predicted protein sequences of Glyma06g36050
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma06g36050.2 sequence type=predicted peptide gene model=Glyma06g36050 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MNTTREDRSRVNLAAQEGDIDGLYTVIQENPHVLEDIDSIPFVDTPLHVAASVGHLRFVTEVMRLKPSFAWKQNPEGLTPIHLALQHGHDNVVLRLVSINNDLVRAKGRKGRTPLHLASKKGEIDLLTKFLLACPNCIEDVTVKSETALHIAVRCGQFEALQALQLLLKTKVDLKAKNLENSTALDVVTSAEIRNALVKAGAKQGSSVTNAPTLADKLRWNITLMGKITIFVLRIRSDITEDQRQAFLIVAALIATATYQSALSPPGGVFQANAGNNNNNNVNITSLNSTTIATQGINVGTSVISEGDFLTLSIFNSLSLLTSTVTMYILTPSGIVGTILFTPMFWFAYCYLYSIRVISPTNATKYFNLIMLCLFFFLYSGVWWTFSIVYKRLKCHEKKRDIGTRNSTGRNIW*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
