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Report for Sequence Feature Glyma06g35585

Feature Type:gene_model
Chromosome:Gm06
Start:37397972
stop:37410676
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma06g35585
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G53970AT Annotation by Michelle Graham. TAIR10: Tyrosine transaminase family protein | chr5:21910676-21912594 FORWARD LENGTH=414 SoyBaseE_val: 0ISS
GO:0009058GO-bp Annotation by Michelle Graham. GO Biological Process: biosynthetic process SoyBaseN/AISS
GO:0010189GO-bp Annotation by Michelle Graham. GO Biological Process: vitamin E biosynthetic process SoyBaseN/AISS
GO:0005737GO-cc Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm SoyBaseN/AISS
GO:0004838GO-mf Annotation by Michelle Graham. GO Molecular Function: L-tyrosine:2-oxoglutarate aminotransferase activity SoyBaseN/AISS
GO:0008483GO-mf Annotation by Michelle Graham. GO Molecular Function: transaminase activity SoyBaseN/AISS
KOG0259 KOG Tyrosine aminotransferase JGI ISS
PTHR11751Panther SUBGROUP I AMINOTRANSFERASE RELATED JGI ISS
PTHR11751:SF28Panther VALINE-PYRUVATE TRANSAMINASE-RELATED JGI ISS
PF00155PFAM Aminotransferase class I and II JGI ISS
UniRef100_I1KDQ5UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1KDQ5_SOYBN SoyBaseE_val: 0ISS
UniRef100_Q4ZJF7UniRef Annotation by Michelle Graham. Most informative UniRef hit: Tyrosine aminotransferase n=1 Tax=Glycine max RepID=Q4ZJF7_SOYBN SoyBaseE_val: 0ISS

Expression Patterns of Glyma06g35585
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma06g35585 not represented in the dataset
Glyma06g35585 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma06g35585 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.06g235500 Wm82.a2.v1IGC As supplied by JGI

References for Glyma06g35585
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Transcripts of Glyma06g35585
>Glyma06g35585.2   sequence type=transcript   gene model=Glyma06g35585   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
CTGTGTAGTTGAGTGGTTGTATGCAAAGGCATCGTTTTGGAAGAACAAGGGCATGTGAGAAAAAACATACTAATCAAATTAAACAGCGAAGAAGAGTTTCAAATTTATTGCTTCGAATCTCCAGCTTCGTCAGGGAAGGAAAACAGCATAACGTGTGGTCTCGGGGGAACCAAAAACTGTGAAATTCTGAAGCCACTAGGCCTTTTAAAAACCAAACTAAGGAAGACGGTTTAGACAGAGAGTACTTCAAGCTAAGAAAATGGAAAGTGGGGTTGTGGCTGTGAACAACAACATCAACAACTATGAATCCAAGGCAACTTCCACCATCACCATTAAGGGCATTCTCAGCCTTCTAATGGAAAGCATTGATGATGAGAATTGTGATGGTGGTGGAAGCAAGAAGAGAGTTATTTCTCTTGGTATGGGTGACCCAACTCTCACCACATTGTTCCACACACCAAAGGTTGTTGAAGAGGCTGTCGCTGATGCTCTTCAATCTCGCAAGTTTCATGGCTATGCTCCCACTGCTGGACTTCTCCAGGCTAGAATTGCAATTGCTGAATATCTATCTCGTGACCTTCCTTATCAATTATCACGAGATGATGTCTTCATCACTTGTGGATGCACACAAGCCATTGATGTTTCGGTGGCGATGCTTGCTCGCCCTGGTGCAAACATCTTGCTTCCAAGGCCAGGCTTCCCAATCTATGAACTTTGTGCTGCATTTAGAGGGGTTGAAGTGAGGCATTATGATCTGCTTCCAGAGAAAGGTTGGGAGGTTGATCTAGATGCTGTTGAAGCTCTTGCTGATCAGAACACAGTGGCGTTGGCGATCATAAACCCTGGGAATCCTTGTGGGAATGTGTACAGTTACCACCATTTGGAGAAGATTGCTGAAACTGCAAAACGGGTTGGAACAATTGTGATCTCTGATGAAGTTTATGGTCACCTTGCATTTGGGAGCAAGCCTTTTGTACCGATGGGAGTTTTTGGCTCTACTGTTCCTGTTCTCACTCTTGGCTCACTTTCTAAGAGATGGATAGTTCCTGGGTGGAGGCTTGGTTGGTTTGTGACAAATGATCCATCTGGCACTTTTAGAGAACCAAAGGCTGCTGTACCTCAGATAATTGCAAATACCGAAGAAATTTTCTTCGAGAAAACCATTGATAATTTGAGGCATACAGCAGATATATGTTGTAAAGAGATAGAGGATATTCCCTGCATTTTTTGCCCTTACAAACCAGAAGGATCCATGGCTATGATGGTGAAATTAAACCTTTCACTTCTGGAAGATATTAGTGATGATATTGACTTCTGTTTCAAACTTGCAAAGGAGGAATCTGTGATCATTCTTCCAGGAACTGCAGTAGGCCTAAAAGATTGGCTTCGTATTACTTTCGCTGCTGATCCATCTGCTCTTGGAGAGGGTATGAGAAGGATAAAATCTTTCTATCAAAGGCATGCAAGAAAATTGTAAAGCTATAGTGAATTCACTTATAAGTAAAATTACTAAATAAATGGCCCTTTACTACTAGTATACTACACAAGAATTGAAGATTTTATTTCAATATAGCATACAGTCTCTTTAGGAATGGACCAATTAACTGGACATTGCAACATAATTAAGAGGCAATCCTCTTTATATTGAAGCATTATCTTTATTCAAATACTAAACGGTTCATGTTCAGTCTTTTTAATCTATAAAAAAGTATATAGATGGATCATCAATAAGCCTTGAGCTGAAAGTGGTGCAAGAGCCTGTATAATTGTCAATTGGAGGGTTATGATATAATTAAATTTACCGATTTTC
Coding sequences of Glyma06g35585
>Glyma06g35585.1   sequence type=CDS   gene model=Glyma06g35585   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGAAAGTGGGGTTGTGGCTGTGAACAACAACATCAACAACTATGAATCCAAGGCAACTTCCACCATCACCATTAAGGGCATTCTCAGCCTTCTAATGGAAAGCATTGATGATGAGAATTGTGATGGTGGTGGAAGCAAGAAGAGAGTTATTTCTCTTGGTATGGGTGACCCAACTCTCACCACATTGTTCCACACACCAAAGGTTGTTGAAGAGGCTGTCGCTGATGCTCTTCAATCTCGCAAGTTTCATGGCTATGCTCCCACTGCTGGACTTCTCCAGGCTAGAATTGCAATTGCTGAATATCTATCTCGTGACCTTCCTTATCAATTATCACGAGATGATGTCTTCATCACTTGTGGATGCACACAAGCCATTGATGTTTCGGTGGCGATGCTTGCTCGCCCTGGTGCAAACATCTTGCTTCCAAGGCCAGGCTTCCCAATCTATGAACTTTGTGCTGCATTTAGAGGGGTTGAAGTGAGGCATTATGATCTGCTTCCAGAGAAAGGTTGGGAGGTTGATCTAGATGCTGTTGAAGCTCTTGCTGATCAGAACACAGTGGCGTTGGCGATCATAAACCCTGGGAATCCTTGTGGGAATGTGTACAGTTACCACCATTTGGAGAAGATTGCTGAAACTGCAAAACGGGTTGGAACAATTGTGATCTCTGATGAAGTTTATGGTCACCTTGCATTTGGGAGCAAGCCTTTTGTACCGATGGGAGTTTTTGGCTCTACTGTTCCTGTTCTCACTCTTGGCTCACTTTCTAAGAGATGGATAGTTCCTGGGTGGAGGCTTGGTTGGTTTGTGACAAATGATCCATCTGGCACTTTTAGAGAACCAAAGGTAGTCGAGCGTATCAAAAAGTATTTTGATCTTCTAGGAGGTCCAGCAACCTTCTTGCAGGCTGCTGTACCTCAGATAATTGCAAATACCGAAGAAATTTTCTTCGAGAAAACCATTGATAATTTGAGGCATACAGCAGATATATGTTGTAAAGAGATAGAGGATATTCCCTGCATTTTTTGCCCTTACAAACCAGAAGGATCCATGGCTATGATGGTGAAATTAAACCTTTCACTTCTGGAAGATATTAGTGATGATATTGACTTCTGTTTCAAACTTGCAAAGGAGGAATCTGTGATCATTCTTCCAGGAACTGCAGTAGGCCTAAAAGATTGGCTTCGTATTACTTTCGCTGCTGATCCATCTGCTCTTGGAGAGGGTATGAGAAGGATAAAATCTTTCTATCAAAGGCATGCAAGAAAATTGTAA

>Glyma06g35585.2   sequence type=CDS   gene model=Glyma06g35585   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGAAAGTGGGGTTGTGGCTGTGAACAACAACATCAACAACTATGAATCCAAGGCAACTTCCACCATCACCATTAAGGGCATTCTCAGCCTTCTAATGGAAAGCATTGATGATGAGAATTGTGATGGTGGTGGAAGCAAGAAGAGAGTTATTTCTCTTGGTATGGGTGACCCAACTCTCACCACATTGTTCCACACACCAAAGGTTGTTGAAGAGGCTGTCGCTGATGCTCTTCAATCTCGCAAGTTTCATGGCTATGCTCCCACTGCTGGACTTCTCCAGGCTAGAATTGCAATTGCTGAATATCTATCTCGTGACCTTCCTTATCAATTATCACGAGATGATGTCTTCATCACTTGTGGATGCACACAAGCCATTGATGTTTCGGTGGCGATGCTTGCTCGCCCTGGTGCAAACATCTTGCTTCCAAGGCCAGGCTTCCCAATCTATGAACTTTGTGCTGCATTTAGAGGGGTTGAAGTGAGGCATTATGATCTGCTTCCAGAGAAAGGTTGGGAGGTTGATCTAGATGCTGTTGAAGCTCTTGCTGATCAGAACACAGTGGCGTTGGCGATCATAAACCCTGGGAATCCTTGTGGGAATGTGTACAGTTACCACCATTTGGAGAAGATTGCTGAAACTGCAAAACGGGTTGGAACAATTGTGATCTCTGATGAAGTTTATGGTCACCTTGCATTTGGGAGCAAGCCTTTTGTACCGATGGGAGTTTTTGGCTCTACTGTTCCTGTTCTCACTCTTGGCTCACTTTCTAAGAGATGGATAGTTCCTGGGTGGAGGCTTGGTTGGTTTGTGACAAATGATCCATCTGGCACTTTTAGAGAACCAAAGGCTGCTGTACCTCAGATAATTGCAAATACCGAAGAAATTTTCTTCGAGAAAACCATTGATAATTTGAGGCATACAGCAGATATATGTTGTAAAGAGATAGAGGATATTCCCTGCATTTTTTGCCCTTACAAACCAGAAGGATCCATGGCTATGATGGTGAAATTAAACCTTTCACTTCTGGAAGATATTAGTGATGATATTGACTTCTGTTTCAAACTTGCAAAGGAGGAATCTGTGATCATTCTTCCAGGAACTGCAGTAGGCCTAAAAGATTGGCTTCGTATTACTTTCGCTGCTGATCCATCTGCTCTTGGAGAGGGTATGAGAAGGATAAAATCTTTCTATCAAAGGCATGCAAGAAAATTGTAA
Predicted protein sequences of Glyma06g35585
>Glyma06g35585.1   sequence type=predicted peptide   gene model=Glyma06g35585   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MESGVVAVNNNINNYESKATSTITIKGILSLLMESIDDENCDGGGSKKRVISLGMGDPTLTTLFHTPKVVEEAVADALQSRKFHGYAPTAGLLQARIAIAEYLSRDLPYQLSRDDVFITCGCTQAIDVSVAMLARPGANILLPRPGFPIYELCAAFRGVEVRHYDLLPEKGWEVDLDAVEALADQNTVALAIINPGNPCGNVYSYHHLEKIAETAKRVGTIVISDEVYGHLAFGSKPFVPMGVFGSTVPVLTLGSLSKRWIVPGWRLGWFVTNDPSGTFREPKVVERIKKYFDLLGGPATFLQAAVPQIIANTEEIFFEKTIDNLRHTADICCKEIEDIPCIFCPYKPEGSMAMMVKLNLSLLEDISDDIDFCFKLAKEESVIILPGTAVGLKDWLRITFAADPSALGEGMRRIKSFYQRHARKL*

>Glyma06g35585.2   sequence type=predicted peptide   gene model=Glyma06g35585   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MESGVVAVNNNINNYESKATSTITIKGILSLLMESIDDENCDGGGSKKRVISLGMGDPTLTTLFHTPKVVEEAVADALQSRKFHGYAPTAGLLQARIAIAEYLSRDLPYQLSRDDVFITCGCTQAIDVSVAMLARPGANILLPRPGFPIYELCAAFRGVEVRHYDLLPEKGWEVDLDAVEALADQNTVALAIINPGNPCGNVYSYHHLEKIAETAKRVGTIVISDEVYGHLAFGSKPFVPMGVFGSTVPVLTLGSLSKRWIVPGWRLGWFVTNDPSGTFREPKAAVPQIIANTEEIFFEKTIDNLRHTADICCKEIEDIPCIFCPYKPEGSMAMMVKLNLSLLEDISDDIDFCFKLAKEESVIILPGTAVGLKDWLRITFAADPSALGEGMRRIKSFYQRHARKL*






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