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Report for Sequence Feature Glyma06g34995

Feature Type:gene_model
Chromosome:Gm06
Start:36729570
stop:36733667
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G53190AT Annotation by Michelle Graham. TAIR10: RING/U-box superfamily protein | chr1:19838072-19840003 FORWARD LENGTH=494 SoyBaseE_val: 1.00E-39ISS
GO:0005634GO-cc Annotation by Michelle Graham. GO Cellular Compartment: nucleus SoyBaseN/AISS
GO:0008270GO-mf Annotation by Michelle Graham. GO Molecular Function: zinc ion binding SoyBaseN/AISS
PTHR14155Panther RING FINGER PROTEIN 6/12/38 JGI ISS
PTHR14155:SF18Panther SUBFAMILY NOT NAMED JGI ISS
PF00097PFAM Zinc finger, C3HC4 type (RING finger) JGI ISS
UniRef100_B9RXA6UniRef Annotation by Michelle Graham. Most informative UniRef hit: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RXA6_RICCO SoyBaseE_val: 8.00E-66ISS
UniRef100_I1KDP5UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein (Fragment) n=1 Tax=Glycine max RepID=I1KDP5_SOYBN SoyBaseE_val: 0ISS

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma06g34995 not represented in the dataset

Glyma06g34995 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection
Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Corresponding NameAnnotation VersionEvidenceComments

Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

>Glyma06g34995.1   sequence type=CDS   gene model=Glyma06g34995   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAGTCAACAAGTCTATTTTCACTCCGAAAGTATCCATTTCAGTGGCACCAACATTTGTCTAGCTTCAGGAAATGGAATTAGTCTAGATTGCCATTATGTACTAGATGTTCATGACAGCCATTTGGATCAGCACTTACAACCATATGTACAAGCTTTCAGCGCTAATAGAAGTTCATCAGAGAATGCGAGAATTGGTCCACAGAGATATCATGACACAAATGGTAGCAGAAGTGGCCACAGATTTCCATGGAGATATCATGACACAAATGGCAGCAGAAGTGGCCATAGATTTCCATATAGATATCATGATACAAATGGCAGCAGAATTGGCCACAGATTTCCACAGAGATATCATGACACAAATGGCAGCAGAAGTGGCCACAGATTTCCACGGAGATATCATGACACAAATGGCAGCAGAAGTGGCCACAGATTTCCACAGAGATATCATGACACAAATGGCAGCAGAAGTGGCCACAGCTTTCCACGGAGATATCATGACACTAATGGCAGCAGAAGTGGCCACAGCTTTCCACAGAGATATCATAATACAACTGGCAGCAGAAGTGGCCACAGATTTCCCCCTCCTCCTCCACAGCATCATAGCTTTCATCATCAAGTACAGCCTGCACAAGTGATCATAGGTCACTCCTTCAACATTCATCCTCCTGTAACTGCACCTTCGTATAGACTTCCAACAAATCCTTCACACGGTTCTTCAATCCTCATACATGATGCTTTTGAGATGGGTGCCAGGCATCCTGGCTTTGCACCATTTGCAGGTGCACGCATACACCAGTCTCATAGAGGCAACTTGCACGAGATGATAACTCTTATACATCAAAATCTTCCTTCTGCGGTCTTTTTCTCAGATGATGATGTTGCTTTACTGGTTGACCATCATACTGATATGCACTTGGACACTGAAGATATGTCTTATGAGGACCTTCTTGAATTAGGTGAGCAGATTGGCAATGCAAAATCGGGTTTACCAGAGAAAACAATTACAAGTCAAATGAAGACCAAAACTTATATACTACCTACTAATGCTACTAACTTGGAGGAGGCAGCTTCTGAGGAACAGGAAACTGATCTTTGCATAATATGCCAGGATGAATATAAGAACAAAGAGAATATTGGAATTCTTAGATGCGGGCATGAATATCACGCAGATTGTTTAAGGAGATGGTTACTTGAGAAAAATGTCTGCCCCATGTGCAAATCAATAGCATTGACTCCTGGAGGAAAACAATGA

>Glyma06g34995.1   sequence type=predicted peptide   gene model=Glyma06g34995   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MSQQVYFHSESIHFSGTNICLASGNGISLDCHYVLDVHDSHLDQHLQPYVQAFSANRSSSENARIGPQRYHDTNGSRSGHRFPWRYHDTNGSRSGHRFPYRYHDTNGSRIGHRFPQRYHDTNGSRSGHRFPRRYHDTNGSRSGHRFPQRYHDTNGSRSGHSFPRRYHDTNGSRSGHSFPQRYHNTTGSRSGHRFPPPPPQHHSFHHQVQPAQVIIGHSFNIHPPVTAPSYRLPTNPSHGSSILIHDAFEMGARHPGFAPFAGARIHQSHRGNLHEMITLIHQNLPSAVFFSDDDVALLVDHHTDMHLDTEDMSYEDLLELGEQIGNAKSGLPEKTITSQMKTKTYILPTNATNLEEAASEEQETDLCIICQDEYKNKENIGILRCGHEYHADCLRRWLLEKNVCPMCKSIALTPGGKQ*







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