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A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT3G15050 | AT | Annotation by Michelle Graham. TAIR10: IQ-domain 10 | chr3:5066879-5067892 REVERSE LENGTH=259 | SoyBase | E_val: 1.00E-81 | ISS |
GO:0008150 | GO-bp | Annotation by Michelle Graham. GO Biological Process: biological process | SoyBase | N/A | ISS |
GO:0010413 | GO-bp | Annotation by Michelle Graham. GO Biological Process: glucuronoxylan metabolic process | SoyBase | N/A | ISS |
GO:0045492 | GO-bp | Annotation by Michelle Graham. GO Biological Process: xylan biosynthetic process | SoyBase | N/A | ISS |
GO:0005634 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: nucleus | SoyBase | N/A | ISS |
GO:0005516 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: calmodulin binding | SoyBase | N/A | ISS |
PTHR10699 | Panther | FAMILY NOT NAMED | JGI | ISS | |
PTHR10699:SF9 | Panther | CALMODULIN BINDING | JGI | ISS | |
UniRef100_B9S0P1 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Calmodulin binding protein, putative n=1 Tax=Ricinus communis RepID=B9S0P1_RICCO | SoyBase | E_val: 1.00E-87 | ISS |
UniRef100_I3SVQ2 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Lotus japonicus RepID=I3SVQ2_LOTJA | SoyBase | E_val: 2.00E-142 | ISS |
Glyma06g34387 not represented in the dataset |
Glyma06g34387 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.06g232400 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma06g34387.2 sequence type=transcript gene model=Glyma06g34387 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ACTAGCTTCCGTTACCTTTCTGGAGACTCCTAATCTTCCAATAGATTAAATATCTTCTTCAGTGTGGTTGGTTTGTCACTTTGCTATGAACTCTCTATGGTTTGTCTTAAATGTTCTACGTGTTATATAACTGTCCACCGTTTATCCTCTCAAAGCAACCCACTTGTTTCTTTTGTCAGCTTTTGCTTCTGTGCCTGGTAAAGAAATTATGAGTCCAAAGAAATGGTTTAAGGCGATTATTAGATTGAGGAAACCGAAGGAAGATAAATCGAAACTAGCAAAGGTGCAATCTACCCCTGAAAAATCAAATGAGTCCTCCGAGGAGAAACAAGAAGACACTCTTGAAGAGGCACTTAGCATTCCTAGTGAAGGTTTGGCGGTAGAAAGGACAGTTCCCACGAGGTTGATAGAAGATATTGCTGCTACTCGGATTCAAAATGCATTTCGTGCATTTTTGGCAAGAAGAACATTGCACCATCTAAGAGGAGCAGTGAAATTTGAGGCTTTGATTCAAGATCACATGGCCAGAGAACAAACAGTAACTGCTCTAAACTACATACATACTTGGAGCAGAATGCAGGACCAGATTAAAGCTCGCAGACTCTATATGATAACAGAAGCCAGGATTAAGCAAAAGAGATTGGAAAACCAGTTAAAACTTGAGGCCAAGATTCATGAGCTCCAGGTGGAATGGAGTGGAGGCTCTGAAACAATGGAAGAGATACTTTCCAGGTTACATCAGCGTGAAGAAGCAGCGGTTAAACGAGAGCGAGCTATGGCATATGCCTACTCTCATCAGTGGAGGCCCAATTGCAGCCAGTACTTGGGCCATGCTACTTACAGCCTAGGGAAGGAGAGCTGGGGTTGGAGCTGGAAGGAGAGGTGGGTAGCAGCCCGTCCTTGGGAAATTCGGGTTCGTTTTCAGGGCCCCATGACAAAGAAAACCAATGGCCAGCCACAGAGAAGCAAAGTAGACAAAAAAGACCACAATTATAATAATAATAATAATAATAATAATAATAATAGAAAAGTGCCCTTGTCTAAGCCTGAGTTGTCAAACGGAAAAGAAAACAACAATATTCCAGAGCTGTCTTAGAACAACACTAAATAAACCACGCTGTCACCTGTGTCAGCTATGGTGATTAATCAATTACTTGACGTGTCCCTTGTATGGCACATCCTTTTTATTTATCGTATTTCTTGTCCTTCATTTTACATTTTTTTTTCATATTTGGCTTGAAGAAAGTATATAACTGATGTGTGTACATTAAATTAGGAGACTTGTAATTTTGTATTTTCATGATCAGTTAGAAACATGGATGATCTTCGCATCTTCCCAATGCCATGTCTTTTTTAATGGTTGAAACATGAGAATGGTCTACTATCCTCTGCAATTCAAGGCATGACTTTAAATTGTATCGCAGTAGTGGTTGCGGTTTCAATGTGTTTTTTT
>Glyma06g34387.1 sequence type=CDS gene model=Glyma06g34387 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGAGTCCAAAGAAATGGTTTAAGGCGATTATTAGATTGAGGAAACCGAAGGAAGATAAATCGAAACTAGCAAAGGTGCAATCTACCCCTGAAAAATCAAATGAGTCCTCCGAGGAGAAACAAGAAGACACTCTTGAAGAGGCACTTAGCATTCCTAGTGAAGGTTTGGCGGTAGAAAGGACAGTTCCCACGAGGTTGATAGAAGATATTGCTGCTACTCGGATTCAAAATGCATTTCGTGCATTTTTGCAGGCAAGAAGAACATTGCACCATCTAAGAGGAGCAGTGAAATTTGAGGCTTTGATTCAAGATCACATGGCCAGAGAACAAACAGTAACTGCTCTAAACTACATACATACTTGGAGCAGAATGCAGGACCAGATTAAAGCTCGCAGACTCTATATGATAACAGAAGCCAGGATTAAGCAAAAGAGATTGGAAAACCAGTTAAAACTTGAGGCCAAGATTCATGAGCTCCAGGTGGAATGGAGTGGAGGCTCTGAAACAATGGAAGAGATACTTTCCAGGTTACATCAGCGTGAAGAAGCAGCGGTTAAACGAGAGCGAGCTATGGCATATGCCTACTCTCATCAGTGGAGGCCCAATTGCAGCCAGTACTTGGGCCATGCTACTTACAGCCTAGGGAAGGAGAGCTGGGGTTGGAGCTGGAAGGAGAGGTGGGTAGCAGCCCGTCCTTGGGAAATTCGGGTTCGTTTTCAGGGCCCCATGACAAAGAAAACCAATGGCCAGCCACAGAGAAGCAAAGTAGACAAAAAAGACCACAATTATAATAATAATAATAATAATAATAATAATAATAGAAAAGTGCCCTTGTCTAAGCCTGAGTTGTCAAACGGAAAAGAAAACAACAATATTCCAGAGCTGTCTTAG >Glyma06g34387.2 sequence type=CDS gene model=Glyma06g34387 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGAGTCCAAAGAAATGGTTTAAGGCGATTATTAGATTGAGGAAACCGAAGGAAGATAAATCGAAACTAGCAAAGGTGCAATCTACCCCTGAAAAATCAAATGAGTCCTCCGAGGAGAAACAAGAAGACACTCTTGAAGAGGCACTTAGCATTCCTAGTGAAGGTTTGGCGGTAGAAAGGACAGTTCCCACGAGGTTGATAGAAGATATTGCTGCTACTCGGATTCAAAATGCATTTCGTGCATTTTTGGCAAGAAGAACATTGCACCATCTAAGAGGAGCAGTGAAATTTGAGGCTTTGATTCAAGATCACATGGCCAGAGAACAAACAGTAACTGCTCTAAACTACATACATACTTGGAGCAGAATGCAGGACCAGATTAAAGCTCGCAGACTCTATATGATAACAGAAGCCAGGATTAAGCAAAAGAGATTGGAAAACCAGTTAAAACTTGAGGCCAAGATTCATGAGCTCCAGGTGGAATGGAGTGGAGGCTCTGAAACAATGGAAGAGATACTTTCCAGGTTACATCAGCGTGAAGAAGCAGCGGTTAAACGAGAGCGAGCTATGGCATATGCCTACTCTCATCAGTGGAGGCCCAATTGCAGCCAGTACTTGGGCCATGCTACTTACAGCCTAGGGAAGGAGAGCTGGGGTTGGAGCTGGAAGGAGAGGTGGGTAGCAGCCCGTCCTTGGGAAATTCGGGTTCGTTTTCAGGGCCCCATGACAAAGAAAACCAATGGCCAGCCACAGAGAAGCAAAGTAGACAAAAAAGACCACAATTATAATAATAATAATAATAATAATAATAATAATAGAAAAGTGCCCTTGTCTAAGCCTGAGTTGTCAAACGGAAAAGAAAACAACAATATTCCAGAGCTGTCTTAG
>Glyma06g34387.1 sequence type=predicted peptide gene model=Glyma06g34387 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MSPKKWFKAIIRLRKPKEDKSKLAKVQSTPEKSNESSEEKQEDTLEEALSIPSEGLAVERTVPTRLIEDIAATRIQNAFRAFLQARRTLHHLRGAVKFEALIQDHMAREQTVTALNYIHTWSRMQDQIKARRLYMITEARIKQKRLENQLKLEAKIHELQVEWSGGSETMEEILSRLHQREEAAVKRERAMAYAYSHQWRPNCSQYLGHATYSLGKESWGWSWKERWVAARPWEIRVRFQGPMTKKTNGQPQRSKVDKKDHNYNNNNNNNNNNRKVPLSKPELSNGKENNNIPELS* >Glyma06g34387.2 sequence type=predicted peptide gene model=Glyma06g34387 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MSPKKWFKAIIRLRKPKEDKSKLAKVQSTPEKSNESSEEKQEDTLEEALSIPSEGLAVERTVPTRLIEDIAATRIQNAFRAFLARRTLHHLRGAVKFEALIQDHMAREQTVTALNYIHTWSRMQDQIKARRLYMITEARIKQKRLENQLKLEAKIHELQVEWSGGSETMEEILSRLHQREEAAVKRERAMAYAYSHQWRPNCSQYLGHATYSLGKESWGWSWKERWVAARPWEIRVRFQGPMTKKTNGQPQRSKVDKKDHNYNNNNNNNNNNRKVPLSKPELSNGKENNNIPELS*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||