Report for Sequence Feature Glyma06g34250
Feature Type: gene_model
Chromosome: Gm06
Start: 35527635
stop: 35537962
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma06g34250
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT1G73170 AT
Annotation by Michelle Graham. TAIR10: P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:27511722-27514783 REVERSE LENGTH=666
SoyBase E_val: 0 ISS
GO:0006508 GO-bp
Annotation by Michelle Graham. GO Biological Process: proteolysis
SoyBase N/A ISS
GO:0016036 GO-bp
Annotation by Michelle Graham. GO Biological Process: cellular response to phosphate starvation
SoyBase N/A ISS
GO:0019375 GO-bp
Annotation by Michelle Graham. GO Biological Process: galactolipid biosynthetic process
SoyBase N/A ISS
GO:0009507 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: chloroplast
SoyBase N/A ISS
GO:0000166 GO-mf
Annotation by Michelle Graham. GO Molecular Function: nucleotide binding
SoyBase N/A ISS
GO:0004176 GO-mf
Annotation by Michelle Graham. GO Molecular Function: ATP-dependent peptidase activity
SoyBase N/A ISS
GO:0004252 GO-mf
Annotation by Michelle Graham. GO Molecular Function: serine-type endopeptidase activity
SoyBase N/A ISS
GO:0005524 GO-mf
Annotation by Michelle Graham. GO Molecular Function: ATP binding
SoyBase N/A ISS
GO:0017111 GO-mf
Annotation by Michelle Graham. GO Molecular Function: nucleoside-triphosphatase activity
SoyBase N/A ISS
PTHR20953 Panther
KINASE-RELATED
JGI ISS
PF00004 PFAM
ATPase family associated with various cellular activities (AAA)
JGI ISS
UniRef100_B9S0Q0 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Stage III sporulation protein AA, putative n=1 Tax=Ricinus communis RepID=B9S0Q0_RICCO
SoyBase E_val: 0 ISS
UniRef100_UPI000233A134 UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI000233A134 related cluster n=1 Tax=unknown RepID=UPI000233A134
SoyBase E_val: 0 ISS
Expression Patterns of Glyma06g34250
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Gene model name correspondences to Glyma06g34250 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.06g232100 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma06g34250
Coding sequences of Glyma06g34250
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma06g34250.2 sequence type=CDS gene model=Glyma06g34250 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGCTAGGGTTCACTCTCCCGCTCCAGCTTCGCTGCTGCCACCTCCCGCAACAACCGCCACTTCCCAACCCGATTTCGCCCAAACCCTTCTACCCGCCCCTCGTTCCCTCCCTTCCCCGGCTCCGAACCGGCCCCAGCCTGCGCGCGAGTTTTCCAGCCGGGTCCGGTCCGGTTTTTTCCGAGGATGAGCTGGACGTGGAGCTGGGGCGGCTGTTGGCGCTGCTGCCGGAGGAGATGCGGCGGCGCGTGAGCGACCACCCCGAGCTGCCGCAGCTGATAGAGGTTGTCATGGATTTGGGACGGAAACCTCTCGCAAGGTTTCCGACCGGGGATTTCGTGATATCGGAGTATCCTATCACGGTTCAGGATATCGAGCACGCCACTGCCCAGGTTGGTGACTTTGCTATTGATAACCGAGCAGGAATCAGCAGGACATTGCATCGGATTAGTGCCATCCGAAATCGCAAGGGCACAATTATTGGTCTAACTTGTCGAGTTGGCAGGGCAATTTCAGGAAGTGCAAAGTTGTTGCAAGATTTGATTCAAGATGGGGCTTCTTTGTTGCTCATTGGACCTCCAGGGGTAGGCAAAACTACAATTATTAGGGAAATAGCTAGGATGCTGGCAAATGATTACAAGAAGCGTGTGATGATTGTTGACACCTCCAATGAAATTGGGGGTGATGGCGATATACCACATGCTGGAATAGGCAATGCTCGACGTATGCAAGTCCCTAACTCTGATATGCAACATAAGGTATTGATAGAAGCAGTTGAAAACCACATGCCACAAGTGATTGTAATTGATGAAATTGGTACAAAACTTGAAGCAATGGCTGCGAGCACAATTGCACAACGTGGGATTCAGCTTGTTGCCACTGCTCATGGAATCACAATTGAGAATCTCATTATGAATCCTTCATTAGAGATGCTTGTTGGAGGAATACAGAGTGTGACACTAGGGGATGAAGAGGCCAGTCGCAGGGGTGTTCAGAAGACAGTATTGGAGAGGAAAGGCCCATCTACATTTAGTTGTGGAGTAGAGATCATTTCAAAGACAGAGTTGCGCATTCACCGTAGCCTTGAAGCAACCGTGGATGCTATTCTTTCTGGTCGTTTTCCAAATGTAGAAATACGGAAGATGAAGTCTCAAGAACAGGAAGAGATTTTACAAGATGGACTTGTTAGTGACAGTTCACTTCAAAAGAATGGTGAAATCATGTTTGAAAAAGCTACAAAGGGGTCTGATGACCAAACCAACCAAAATGAATCACTTTTAAAGTTGCCTATTGACTTGGTGGAAGATTCCTGGCAGCTTAAATTGCCACTTAGCCTGTTTTGTTATGGGATTTTAGAGGCAACTGTTATTCAAGGGGTTAAGCAGTTGAAAATGAATGATGCGGCTATTCAATTGACTGATAATATTAGTGAAGCAAATGCTTTACTTGCCTTACAATCCAAGCTTAAAAAGAATCCAGGGATCCAGGCTGCCGCTAAATCTCATGATATTCCCATTTATGTGACAAAGACAAGTTCTTTGGAGCATGTAGCAAAAGCCATACGGGCATTAGTAAGTGATCATGAAGATGGTATAAAGGATTCTGAACTAACGGACAAGATAAAATCCTCAGAGATGATTGATGCTTTGGAGGAGGCGCGAATGGCTATAGAGCATACAGTGATTCTAAAGGGAGAACCTGTGGATCTACTCCCAAGATCATCACACATAATATCTCTGCAGCTGGAACTTGTTCGCAAATACCAACTAGAAACAAGGAGAATCAGTGGAGATTCAGGTGTACATTTGCGCATACTTCCATCCCATTATGAAACGGATGAAGTAAAAACTAGTGAAACTTCTGAGTTTGATAGTGAATTATTAGATGACTTTGCCTCCAATGGCAGTGTGAATGGCTCATTCAACAGCTTGGATAGATTGCCCCTGCTACCCGAGTAA
Predicted protein sequences of Glyma06g34250
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma06g34250.2 sequence type=predicted peptide gene model=Glyma06g34250 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MLGFTLPLQLRCCHLPQQPPLPNPISPKPFYPPLVPSLPRLRTGPSLRASFPAGSGPVFSEDELDVELGRLLALLPEEMRRRVSDHPELPQLIEVVMDLGRKPLARFPTGDFVISEYPITVQDIEHATAQVGDFAIDNRAGISRTLHRISAIRNRKGTIIGLTCRVGRAISGSAKLLQDLIQDGASLLLIGPPGVGKTTIIREIARMLANDYKKRVMIVDTSNEIGGDGDIPHAGIGNARRMQVPNSDMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGITIENLIMNPSLEMLVGGIQSVTLGDEEASRRGVQKTVLERKGPSTFSCGVEIISKTELRIHRSLEATVDAILSGRFPNVEIRKMKSQEQEEILQDGLVSDSSLQKNGEIMFEKATKGSDDQTNQNESLLKLPIDLVEDSWQLKLPLSLFCYGILEATVIQGVKQLKMNDAAIQLTDNISEANALLALQSKLKKNPGIQAAAKSHDIPIYVTKTSSLEHVAKAIRALVSDHEDGIKDSELTDKIKSSEMIDALEEARMAIEHTVILKGEPVDLLPRSSHIISLQLELVRKYQLETRRISGDSGVHLRILPSHYETDEVKTSETSEFDSELLDDFASNGSVNGSFNSLDRLPLLPE*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
