|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT5G45600 | AT | Annotation by Michelle Graham. TAIR10: YEATS family protein | chr5:18488059-18489666 FORWARD LENGTH=268 | SoyBase | E_val: 8.00E-45 | ISS |
GO:0006355 | GO-bp | Annotation by Michelle Graham. GO Biological Process: regulation of transcription, DNA-dependent | SoyBase | N/A | ISS |
GO:0010228 | GO-bp | Annotation by Michelle Graham. GO Biological Process: vegetative to reproductive phase transition of meristem | SoyBase | N/A | ISS |
GO:0048510 | GO-bp | Annotation by Michelle Graham. GO Biological Process: regulation of timing of transition from vegetative to reproductive phase | SoyBase | N/A | ISS |
GO:0090239 | GO-bp | Annotation by Michelle Graham. GO Biological Process: regulation of histone H4 acetylation | SoyBase | N/A | ISS |
GO:0005634 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: nucleus | SoyBase | N/A | ISS |
GO:0009507 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: chloroplast | SoyBase | N/A | ISS |
PTHR23195 | Panther | YEATS DOMAIN | JGI | ISS | |
PTHR23195:SF15 | Panther | SUBFAMILY NOT NAMED | JGI | ISS | |
UniRef100_B9SXM8 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: YEATS domain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SXM8_RICCO | SoyBase | E_val: 7.00E-47 | ISS |
UniRef100_I1J8L7 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein (Fragment) n=2 Tax=Glycine max RepID=I1J8L7_SOYBN | SoyBase | E_val: 5.00E-51 | ISS |
Glyma06g34210 not represented in the dataset |
Glyma06g34210 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.06g231700 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma06g34210.1 sequence type=CDS gene model=Glyma06g34210 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGTTTCCTTTTTGCTGGTTACTTGGATTTGGGACTTGGGAGATTGCATTTTTTTAATAACATATGTTAATGGATTATGTGGTTATAGGTATCAACATTTGAAATTATATCCAGAAGATGAATATGGCCCCCAGTCTATGAAGAAACCCGTGGTTGTTGAATCTTATAACGAGATTGTTTTCCCTGAACCCTCAGAGGTTTTTCTTGCACGTGTACAAAATCATCCTGCCGTTAATGTGCCTAGGCTTCCTGCTGGTTTGAATTTATCATGTTCTGGTACTTTCCTTTCAATGTTATTCCTATTCCTACTAAGAGGTGACACCAAAGATCATCCTCTAACTCAATGGTTCTTAAACTTCTCTGAGGATGATGAGATCTTAAAACTTGCAGCAGCTCGCCAGCAGCAACAATTTCATCAAGTAGAAGCTAGGCAACAAAGTTCTATGAATCCAGCTTCCTCTTGA
>Glyma06g34210.1 sequence type=predicted peptide gene model=Glyma06g34210 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MVSFLLVTWIWDLGDCIFLITYVNGLCGYRYQHLKLYPEDEYGPQSMKKPVVVESYNEIVFPEPSEVFLARVQNHPAVNVPRLPAGLNLSCSGTFLSMLFLFLLRGDTKDHPLTQWFLNFSEDDEILKLAAARQQQQFHQVEARQQSSMNPASS*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||