|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT1G62360 | AT | Annotation by Michelle Graham. TAIR10: KNOX/ELK homeobox transcription factor | chr1:23058796-23061722 REVERSE LENGTH=382 | SoyBase | E_val: 2.00E-16 | ISS |
GO:0006355 | GO-bp | Annotation by Michelle Graham. GO Biological Process: regulation of transcription, DNA-dependent | SoyBase | N/A | ISS |
GO:0007389 | GO-bp | Annotation by Michelle Graham. GO Biological Process: pattern specification process | SoyBase | N/A | ISS |
GO:0009691 | GO-bp | Annotation by Michelle Graham. GO Biological Process: cytokinin biosynthetic process | SoyBase | N/A | ISS |
GO:0009855 | GO-bp | Annotation by Michelle Graham. GO Biological Process: determination of bilateral symmetry | SoyBase | N/A | ISS |
GO:0009886 | GO-bp | Annotation by Michelle Graham. GO Biological Process: post-embryonic morphogenesis | SoyBase | N/A | ISS |
GO:0009887 | GO-bp | Annotation by Michelle Graham. GO Biological Process: organ morphogenesis | SoyBase | N/A | ISS |
GO:0009909 | GO-bp | Annotation by Michelle Graham. GO Biological Process: regulation of flower development | SoyBase | N/A | ISS |
GO:0009934 | GO-bp | Annotation by Michelle Graham. GO Biological Process: regulation of meristem structural organization | SoyBase | N/A | ISS |
GO:0010051 | GO-bp | Annotation by Michelle Graham. GO Biological Process: xylem and phloem pattern formation | SoyBase | N/A | ISS |
GO:0010093 | GO-bp | Annotation by Michelle Graham. GO Biological Process: specification of floral organ identity | SoyBase | N/A | ISS |
GO:0019827 | GO-bp | Annotation by Michelle Graham. GO Biological Process: stem cell maintenance | SoyBase | N/A | ISS |
GO:0048438 | GO-bp | Annotation by Michelle Graham. GO Biological Process: floral whorl development | SoyBase | N/A | ISS |
GO:0048439 | GO-bp | Annotation by Michelle Graham. GO Biological Process: flower morphogenesis | SoyBase | N/A | ISS |
GO:0048440 | GO-bp | Annotation by Michelle Graham. GO Biological Process: carpel development | SoyBase | N/A | ISS |
GO:0048481 | GO-bp | Annotation by Michelle Graham. GO Biological Process: ovule development | SoyBase | N/A | ISS |
GO:0048507 | GO-bp | Annotation by Michelle Graham. GO Biological Process: meristem development | SoyBase | N/A | ISS |
GO:0048513 | GO-bp | Annotation by Michelle Graham. GO Biological Process: organ development | SoyBase | N/A | ISS |
GO:0048519 | GO-bp | Annotation by Michelle Graham. GO Biological Process: negative regulation of biological process | SoyBase | N/A | ISS |
GO:0005634 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: nucleus | SoyBase | N/A | ISS |
GO:0003677 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: DNA binding | SoyBase | N/A | ISS |
GO:0003700 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: sequence-specific DNA binding transcription factor activity | SoyBase | N/A | ISS |
GO:0005515 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: protein binding | SoyBase | N/A | ISS |
GO:0043565 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: sequence-specific DNA binding | SoyBase | N/A | ISS |
PTHR11850 | Panther | HOMEOBOX PROTEIN | JGI | ISS | |
PTHR11850:SF48 | Panther | HOMEOBOX PROTEIN MEIS3 | JGI | ISS | |
PF03791 | PFAM | KNOX2 domain | JGI | ISS | |
UniRef100_A7J0W0 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: KNT1 n=2 Tax=Glycine max RepID=A7J0W0_SOYBN | SoyBase | E_val: 8.00E-19 | ISS |
UniRef100_I1MR25 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MR25_SOYBN | SoyBase | E_val: 6.00E-20 | ISS |
Glyma06g30390 not represented in the dataset |
Glyma06g30390 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma06g30390.1 sequence type=CDS gene model=Glyma06g30390 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGCAGGTGGAACAGCTAGCATAGACGAGGATCCAGAAGTGGATCAGTTCATGGAGGCTTACTGTGAGATGCTGATCAAGTACGAGCAAGAGCTCTCCAAACCCTTCAAGGAAGCCATGCTCTTTCTTTAA
>Glyma06g30390.1 sequence type=predicted peptide gene model=Glyma06g30390 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MAGGTASIDEDPEVDQFMEAYCEMLIKYEQELSKPFKEAMLFL*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||