Report for Sequence Feature Glyma06g27440
Feature Type: gene_model
Chromosome: Gm06
Start: 25505293
stop: 25512739
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma06g27440
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT4G30935 AT
Annotation by Michelle Graham. TAIR10: WRKY DNA-binding protein 32 | chr4:15051916-15053908 REVERSE LENGTH=466
SoyBase E_val: 3.00E-118 ISS
GO:0006355 GO-bp
Annotation by Michelle Graham. GO Biological Process: regulation of transcription, DNA-dependent
SoyBase N/A ISS
GO:0005634 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: nucleus
SoyBase N/A ISS
GO:0003700 GO-mf
Annotation by Michelle Graham. GO Molecular Function: sequence-specific DNA binding transcription factor activity
SoyBase N/A ISS
GO:0005515 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein binding
SoyBase N/A ISS
GO:0043565 GO-mf
Annotation by Michelle Graham. GO Molecular Function: sequence-specific DNA binding
SoyBase N/A ISS
PF03106 PFAM
WRKY DNA -binding domain
JGI ISS
UniRef100_A7LHI1 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: WRKY44 (Fragment) n=1 Tax=Glycine max RepID=A7LHI1_SOYBN
SoyBase E_val: 6.00E-178 ISS
UniRef100_C6T725 UniRef
Annotation by Michelle Graham. Best UniRef hit: Putative uncharacterized protein n=1 Tax=Glycine max RepID=C6T725_SOYBN
SoyBase E_val: 0 ISS
Proteins Associated with Glyma06g27440
Locus Gene Symbol Protein Name
WRKY103 WRKY Transcription Factor
Expression Patterns of Glyma06g27440
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Gene model name correspondences to Glyma06g27440 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.06g219800 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma06g27440
Transcripts of Glyma06g27440
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma06g27440.3 sequence type=transcript gene model=Glyma06g27440 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
GAGGTTGAGAGAATTTGATATGGATGAGATGGAGGAAGGGACAGCAGTGGCGGAGGGCCTAGTTGGCAACGACAACAAGGTCAAGAGCATCGCAAAGCGAAGAGTTGCAACTTTGTCCGCTAGATCTAGAAAGCAAACAATAGAAAAATTATTTAAAAAAATAATTTCATTTATTATTGAAAATTATTTACCCAATTGCAAACCTACAATAGCATGTCAACTTGTTCCCTCACCTATGAGAAAGTTGGTTTAGGACTTCATCTTAGACACGACCCATGCTTTGTGTTGTTTTTATTTATTATTATTTTTTTCTTCACATTAGTAACCTGTCATCACAGGTAATTTTTTGGTTCCTCACCGTTGTCCACGGTTAGCAATCTTAATGATAACGGTCCAAAGAGGAAAAGGTAAAGGGAAAGAGTTGACTTGCCGACTCATCCATTCAAGTGTGGTGTACGTAAGAAGCGGTAGCAGAAGAACACAAACGGCGTTAACAAAACCGTGAGATTCGATTAGAAGAGAAGCAACGGCGATGCAGGTCCAGTAGTAGCAACGGCGAAACGGTGCAGAGACACCCTCCGTTTCGAAGTCTTGGCAAAACCCGACAACCCACCTGAAAGAGAGAGAAACAGAGTACTAGTAGCCAATAGCAGCCAAAGACACATATACCCCGACACACCACAACACACGTAGCTTTCTTCCTTCCTTCCTTTCTTTCTTTCTTTCACAACCCACTCTCCATCAAATATCAATCAATCAATCAAAGAAAGAGCCAGCGAGAAAATGAAAATTCGTGGTGGAATCATCATAGACTGAAGAGAAAAAAAGGTTGTTGTGCACTGTCATGAAAGAGGATGAAGAGACGCAGCAGAATCAACAACAAATCACTGACTCGTCCCTCTCCACCGAGTCACGCACTTCCACTCCTTCTGATGGAGCGCCACCCAACTCGGAAACCCTAGTTCTCCGCTCCTCGCTTCTGCATGACCTTGCCACTCATATGCAGGGAAGCTCTACCGCACGTAAGGGTGGAAAAGCTGAGAGTAAGGTGTCTGCTCAGCCTCCTGATGAGGAAACTGTTGTAAAAGATGCAGTTGAGGCACCTAAAAAACAGACAGAAAATCGACTTCAGTCTTTTTGTTCAACTTCATTATCTGGAGTATCACCAACTTCTGTTTCACATTCTTTATCATCTGCCCTTAGTCCAACTGTACCACAACAGAGACCGTCTCCTCCTAAGGCTAATAGTGTACAAGTGCCAAAAGTAGACAAAGGAACACCTTCTGATGGTACAACCTTATCTTCTGTTTCTGTTGCAAGGGCATCTGCATCTGATGGATACAACTGGCGGAAGTACGGCCAGAAGCAAGTGAAGAGTCCTATGGGTTCTCGAAGCTATTACAGGTGTACCCATTCATATTGTTGTGCTAAGAAGATTAAATTTTGCGACCATTCAGGACATGTGATAGAGATTGTTTATAAAAGTCAACATAGTCATGATCCCCCGCATAAAATTGATACCGCTAAGGAAAGTAAGCTCCTGCCTTCCAGTGAACCTAAAGTAGAAAGCAGTGTTTCAAAGCACTCTACCAATGTTTTGAATGATTCTGATCCATCATCTTCTCCAAAAGAACTTTTACAAGAAACACCTTGCAGTGGTGATAAGAATCTAGAAAACTCATCTAATGTTGAGAATGGCAAAATTATTTTGAATGATGAACATGTTAATGACCCAGAGCCAAAAAGAAGATTAAACAATAGTGATTTGGATACGGCAGTAAAACCAGGCAAGAAAACAAAGTTTGTTGTACATGCGACAAAGGATGTGGGGATATCAGGTGATGGATACCGGTGGCGCAAGTATGGACAAAAGTTAGTGAAGGGAAATCCACACTTCAGAAACTACTACAGATGCACTACTGCTGGATGTCCTGTCCGAAAGCACATTGAGACTGCTGTGGATAATTCAAAAGCTCTCATCATAACGTACAAGGGAATGCATGATCATGACATGCCTGTGCCCAAGAAACGGCATGGCCCGCCAAGTGCTTCACTTGTGGCTGCGGCAGCACCTGCTTCAACGAACAATGTGCAGTTAAAAAAAACTGGATTGCTACAAAACCAGGAAACTGAAGCTCAATGTTTAGAGGACACAGAAGGAGAGTTAACCGGGGAAGCGTTGGACCTTGGTGGTGAGAAAGCAATTGAGTCGGCTCGAACTCTTTTGAGCATAGGCTTTGAAATTAAACCTTGTTGAATACATCTTTCATAAATCATGCAGTTGCATTGCATCTATATTATATTAACTGGTAGGCCTCATGTAATTTTGGCGGTTTCCCATGTTTATCTTCTCTTTCTTGATTTCTTTACCCATGCATGTAGTCTTTTAGTGGAGCAGTTATATTTATTTGTACACAACGTTCAGCTGGTCTGAAACAGCTTGCGTAGTCGAGCGAATATGGAATAGACTTGTATCTTATTCTCATGGAGAGTGAGAATAGGTGAGGATAGTGTTACCATTCAACTTTACTCGCACATTGTTTTGTTTGAGTGTAAATAGAAAGGAATGAAATAGAAAGGAAGACAATAGAATAAAAATATAGGATTTCTGCTGTTTATTAGGGAGGAAAAACGAGG
Coding sequences of Glyma06g27440
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma06g27440.2 sequence type=CDS gene model=Glyma06g27440 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGAAAGAGGATGAAGAGACGCAGCAGAATCAACAACAAATCACTGACTCGTCCCTCTCCACCGAGTCACGCACTTCCACTCCTTCTGATGGAGCGCCACCCAACTCGGAAACCCTAGTTCTCCGCTCCTCGCTTCTGCATGACCTTGCCACTCATATGCAGGGAAGCTCTACCGCACGTAAGGGTGGAAAAGCTGAGAGTAAGGTGTCTGCTCAGCCTCCTGATGAGGAAACTGTTGTAAAAGATGCAGTTGAGGCACCTAAAAAACAGACAGAAAATCGACTTCAGTCTTTTTGTTCAACTTCATTATCTGGAGTATCACCAACTTCTGTTTCACATTCTTTATCATCTGCCCTTAGTCCAACTGTACCACAACAGAGACCGTCTCCTCCTAAGGCTAATAGTGTACAAGTGCCAAAAGTAGACAAAGGAACACCTTCTGATGGTACAACCTTATCTTCTGTTTCTGTTGCAAGGGCATCTGCATCTGATGGATACAACTGGCGGAAGTACGGCCAGAAGCAAGTGAAGAGTCCTATGGGTTCTCGAAGCTATTACAGGTGTACCCATTCATATTGTTGTGCTAAGAAGATTAAATTTTGCGACCATTCAGGACATGTGATAGAGATTGTTTATAAAAGTCAACATAGTCATGATCCCCCGCATAAAATTGATACCGCTAAGGAAAGTAAGCTCCTGCCTTCCAGTGAACCTAAAGTAGAAAGCAGTGTTTCAAAGCACTCTACCAATGTTTTGAATGATTCTGATCCATCATCTTCTCCAAAAGAACTTTTACAAGAAACACCTTGCAGTGGTGATAAGAATCTAGAAAACTCATCTAATGTTGAGAATGGCAAAATTATTTTGAATGATGAACATGTTAATGACCCAGAGCCAAAAAGAAGGCAAGTTGCATGCGAATTCATTTTCTTCATAGGAAAATAA
>Glyma06g27440.3 sequence type=CDS gene model=Glyma06g27440 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGAAAGAGGATGAAGAGACGCAGCAGAATCAACAACAAATCACTGACTCGTCCCTCTCCACCGAGTCACGCACTTCCACTCCTTCTGATGGAGCGCCACCCAACTCGGAAACCCTAGTTCTCCGCTCCTCGCTTCTGCATGACCTTGCCACTCATATGCAGGGAAGCTCTACCGCACGTAAGGGTGGAAAAGCTGAGAGTAAGGTGTCTGCTCAGCCTCCTGATGAGGAAACTGTTGTAAAAGATGCAGTTGAGGCACCTAAAAAACAGACAGAAAATCGACTTCAGTCTTTTTGTTCAACTTCATTATCTGGAGTATCACCAACTTCTGTTTCACATTCTTTATCATCTGCCCTTAGTCCAACTGTACCACAACAGAGACCGTCTCCTCCTAAGGCTAATAGTGTACAAGTGCCAAAAGTAGACAAAGGAACACCTTCTGATGGTACAACCTTATCTTCTGTTTCTGTTGCAAGGGCATCTGCATCTGATGGATACAACTGGCGGAAGTACGGCCAGAAGCAAGTGAAGAGTCCTATGGGTTCTCGAAGCTATTACAGGTGTACCCATTCATATTGTTGTGCTAAGAAGATTAAATTTTGCGACCATTCAGGACATGTGATAGAGATTGTTTATAAAAGTCAACATAGTCATGATCCCCCGCATAAAATTGATACCGCTAAGGAAAGTAAGCTCCTGCCTTCCAGTGAACCTAAAGTAGAAAGCAGTGTTTCAAAGCACTCTACCAATGTTTTGAATGATTCTGATCCATCATCTTCTCCAAAAGAACTTTTACAAGAAACACCTTGCAGTGGTGATAAGAATCTAGAAAACTCATCTAATGTTGAGAATGGCAAAATTATTTTGAATGATGAACATGTTAATGACCCAGAGCCAAAAAGAAGATTAAACAATAGTGATTTGGATACGGCAGTAAAACCAGGCAAGAAAACAAAGTTTGTTGTACATGCGACAAAGGATGTGGGGATATCAGGTGATGGATACCGGTGGCGCAAGTATGGACAAAAGTTAGTGAAGGGAAATCCACACTTCAGAAACTACTACAGATGCACTACTGCTGGATGTCCTGTCCGAAAGCACATTGAGACTGCTGTGGATAATTCAAAAGCTCTCATCATAACGTACAAGGGAATGCATGATCATGACATGCCTGTGCCCAAGAAACGGCATGGCCCGCCAAGTGCTTCACTTGTGGCTGCGGCAGCACCTGCTTCAACGAACAATGTGCAGTTAAAAAAAACTGGATTGCTACAAAACCAGGAAACTGAAGCTCAATGTTTAGAGGACACAGAAGGAGAGTTAACCGGGGAAGCGTTGGACCTTGGTGGTGAGAAAGCAATTGAGTCGGCTCGAACTCTTTTGAGCATAGGCTTTGAAATTAAACCTTGTTGA
Predicted protein sequences of Glyma06g27440
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma06g27440.2 sequence type=predicted peptide gene model=Glyma06g27440 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MKEDEETQQNQQQITDSSLSTESRTSTPSDGAPPNSETLVLRSSLLHDLATHMQGSSTARKGGKAESKVSAQPPDEETVVKDAVEAPKKQTENRLQSFCSTSLSGVSPTSVSHSLSSALSPTVPQQRPSPPKANSVQVPKVDKGTPSDGTTLSSVSVARASASDGYNWRKYGQKQVKSPMGSRSYYRCTHSYCCAKKIKFCDHSGHVIEIVYKSQHSHDPPHKIDTAKESKLLPSSEPKVESSVSKHSTNVLNDSDPSSSPKELLQETPCSGDKNLENSSNVENGKIILNDEHVNDPEPKRRQVACEFIFFIGK*
>Glyma06g27440.3 sequence type=predicted peptide gene model=Glyma06g27440 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MKEDEETQQNQQQITDSSLSTESRTSTPSDGAPPNSETLVLRSSLLHDLATHMQGSSTARKGGKAESKVSAQPPDEETVVKDAVEAPKKQTENRLQSFCSTSLSGVSPTSVSHSLSSALSPTVPQQRPSPPKANSVQVPKVDKGTPSDGTTLSSVSVARASASDGYNWRKYGQKQVKSPMGSRSYYRCTHSYCCAKKIKFCDHSGHVIEIVYKSQHSHDPPHKIDTAKESKLLPSSEPKVESSVSKHSTNVLNDSDPSSSPKELLQETPCSGDKNLENSSNVENGKIILNDEHVNDPEPKRRLNNSDLDTAVKPGKKTKFVVHATKDVGISGDGYRWRKYGQKLVKGNPHFRNYYRCTTAGCPVRKHIETAVDNSKALIITYKGMHDHDMPVPKKRHGPPSASLVAAAAPASTNNVQLKKTGLLQNQETEAQCLEDTEGELTGEALDLGGEKAIESARTLLSIGFEIKPC*